RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.29■■□□□ 1
BRF1-217ENST00000550375 C1QTNF8P60827 252 aa21.28■■□□□ 1
BRF1-217ENST00000550375 ATP2B3Q16720 1220 aa21.27■■□□□ 1
BRF1-217ENST00000550375 HSP90AB4PQ58FF6 505 aa21.27■■□□□ 1
BRF1-217ENST00000550375 IRS2Q9Y4H2 1338 aa21.26■□□□□ 0.99
BRF1-217ENST00000550375 ECE2O60344 883 aa21.26■□□□□ 0.99
BRF1-217ENST00000550375 IFIT1P09914 478 aaKnown RBP21.26■□□□□ 0.99
BRF1-217ENST00000550375 SLC5A1P13866 664 aa21.26■□□□□ 0.99
BRF1-217ENST00000550375 FGFR2P21802 821 aa21.26■□□□□ 0.99
BRF1-217ENST00000550375 LPIN2Q92539 896 aa21.26■□□□□ 0.99
BRF1-217ENST00000550375 BCL11AQ9H165 835 aa21.26■□□□□ 0.99
BRF1-217ENST00000550375 NEFLP07196 543 aa21.25■□□□□ 0.99
BRF1-217ENST00000550375 GYG1P46976 350 aa21.25■□□□□ 0.99
BRF1-217ENST00000550375 ERC1Q8IUD2 1116 aa21.25■□□□□ 0.99
BRF1-217ENST00000550375 ZNRF3Q9ULT6 936 aa21.25■□□□□ 0.99
BRF1-217ENST00000550375 AKAP2Q9Y2D5 859 aa21.25■□□□□ 0.99
BRF1-217ENST00000550375 TIMM10P62072 90 aa21.24■□□□□ 0.99
BRF1-217ENST00000550375 C15orf52Q6ZUT6 534 aaKnown RBP21.24■□□□□ 0.99
BRF1-217ENST00000550375 NEUROD6Q96NK8 337 aa21.24■□□□□ 0.99
BRF1-217ENST00000550375 SCN9AQ15858 1988 aa21.24■□□□□ 0.99
BRF1-217ENST00000550375 ZNF541Q9H0D2 1346 aa21.24■□□□□ 0.99
BRF1-217ENST00000550375 A0A1B0GUL7 405 aa21.23■□□□□ 0.99
BRF1-217ENST00000550375 YDJCA8MPS7 323 aa21.23■□□□□ 0.99
BRF1-217ENST00000550375 FZD9O00144 591 aa21.23■□□□□ 0.99
BRF1-217ENST00000550375 EIF6P56537 245 aaKnown RBP21.23■□□□□ 0.99
BRF1-217ENST00000550375 ZNF804AQ7Z570 1209 aa21.23■□□□□ 0.99
BRF1-217ENST00000550375 RHPN1Q8TCX5 695 aa21.23■□□□□ 0.99
BRF1-217ENST00000550375 COA1Q9GZY4 146 aa21.23■□□□□ 0.99
BRF1-217ENST00000550375 DCTPP1Q9H773 170 aa21.23■□□□□ 0.99
BRF1-217ENST00000550375 KCNQ5Q9NR82 932 aa21.23■□□□□ 0.99
BRF1-217ENST00000550375 ARAP2Q8WZ64 1704 aa21.23■□□□□ 0.99
BRF1-217ENST00000550375 RAB11FIP3O75154 756 aa21.23■□□□□ 0.99
BRF1-217ENST00000550375 ADORA1P30542 326 aa21.23■□□□□ 0.99
BRF1-217ENST00000550375 FAM84BQ96KN1 310 aaPredicted RBP21.23■□□□□ 0.99
BRF1-217ENST00000550375 IL1RAPL2Q9NP60 686 aa21.23■□□□□ 0.99
BRF1-217ENST00000550375 ZNF609O15014 1411 aa21.22■□□□□ 0.99
BRF1-217ENST00000550375 ZC3H4Q9UPT8 1303 aaKnown RBP21.22■□□□□ 0.99
BRF1-217ENST00000550375 RAD17O75943 681 aa21.22■□□□□ 0.99
BRF1-217ENST00000550375 HIBADHP31937 336 aaKnown RBP21.22■□□□□ 0.99
BRF1-217ENST00000550375 BCAMP50895 628 aa21.22■□□□□ 0.99
BRF1-217ENST00000550375 HDAC1Q13547 482 aaPredicted RBP21.22■□□□□ 0.99
BRF1-217ENST00000550375 TNNI3KQ59H18 835 aa21.22■□□□□ 0.99
BRF1-217ENST00000550375 CAVIN4Q5BKX8 364 aa21.22■□□□□ 0.99
BRF1-217ENST00000550375 VPS37DQ86XT2 251 aa21.22■□□□□ 0.99
BRF1-217ENST00000550375 KIF1BPQ96EK5 621 aa21.22■□□□□ 0.99
BRF1-217ENST00000550375 RWDD1Q9H446 243 aaPredicted RBP21.22■□□□□ 0.99
BRF1-217ENST00000550375 CD209Q9NNX6 404 aa21.22■□□□□ 0.99
BRF1-217ENST00000550375 FPGT-TNNI3KV9GXZ4 949 aa21.22■□□□□ 0.99
BRF1-217ENST00000550375 CXCL9Q07325 125 aa21.21■□□□□ 0.99
BRF1-217ENST00000550375 FBXW7Q969H0 707 aa21.21■□□□□ 0.99
BRF1-217ENST00000550375 XAGE2Q96GT9 111 aa21.21■□□□□ 0.99
BRF1-217ENST00000550375 GJA3Q9Y6H8 435 aa21.21■□□□□ 0.99
BRF1-217ENST00000550375 SMARCA5O60264 1052 aaPredicted RBP21.2■□□□□ 0.98
BRF1-217ENST00000550375 IGHDP01880 384 aa21.2■□□□□ 0.98
BRF1-217ENST00000550375 DPY19L2Q6NUT2 758 aa21.2■□□□□ 0.98
BRF1-217ENST00000550375 PODNQ7Z5L7 613 aa21.2■□□□□ 0.98
BRF1-217ENST00000550375 FBXO33Q7Z6M2 555 aa21.2■□□□□ 0.98
BRF1-217ENST00000550375 ZNF526Q8TF50 670 aaPredicted RBP21.2■□□□□ 0.98
BRF1-217ENST00000550375 GPR108Q9NPR9 543 aa21.2■□□□□ 0.98
BRF1-217ENST00000550375 IQSEC3Q9UPP2 1182 aaPredicted RBP21.2■□□□□ 0.98
BRF1-217ENST00000550375 PSME4Q14997 1843 aa21.19■□□□□ 0.98
BRF1-217ENST00000550375 MYH13Q9UKX3 1938 aa21.19■□□□□ 0.98
BRF1-217ENST00000550375 DDNO94850 711 aaPredicted RBP21.19■□□□□ 0.98
BRF1-217ENST00000550375 CIAPIN1Q6FI81 312 aa21.19■□□□□ 0.98
BRF1-217ENST00000550375 EAF2Q96CJ1 260 aaPredicted RBP21.19■□□□□ 0.98
BRF1-217ENST00000550375 LRRCC1Q9C099 1032 aa21.19■□□□□ 0.98
BRF1-217ENST00000550375 CCDC8Q9H0W5 538 aaPredicted RBP21.19■□□□□ 0.98
BRF1-217ENST00000550375 IL1R1P14778 569 aa21.18■□□□□ 0.98
BRF1-217ENST00000550375 GORABQ5T7V8 394 aa21.18■□□□□ 0.98
BRF1-217ENST00000550375 AACSQ86V21 672 aa21.18■□□□□ 0.98
BRF1-217ENST00000550375 GLTPD2A6NH11 291 aa21.17■□□□□ 0.98
BRF1-217ENST00000550375 PSMD14O00487 310 aa21.17■□□□□ 0.98
BRF1-217ENST00000550375 PHKA1P46020 1223 aa21.17■□□□□ 0.98
BRF1-217ENST00000550375 TNIP1Q15025 636 aa21.17■□□□□ 0.98
BRF1-217ENST00000550375 CLASRPQ8N2M8 674 aaKnown RBP21.17■□□□□ 0.98
BRF1-217ENST00000550375 DBNDD2Q9BQY9 259 aa21.17■□□□□ 0.98
BRF1-217ENST00000550375 TLR7Q9NYK1 1049 aaKnown RBP21.17■□□□□ 0.98
BRF1-217ENST00000550375 JAG2Q9Y219 1238 aa21.17■□□□□ 0.98
BRF1-217ENST00000550375 FRAT2O75474 233 aaPredicted RBP21.16■□□□□ 0.98
BRF1-217ENST00000550375 GTF2IP78347 998 aa21.16■□□□□ 0.98
BRF1-217ENST00000550375 CCDC102BQ68D86 513 aa21.16■□□□□ 0.98
BRF1-217ENST00000550375 TDRD7Q8NHU6 1098 aaKnown RBP21.16■□□□□ 0.98
BRF1-217ENST00000550375 ZNF646O15015 1829 aaPredicted RBP21.15■□□□□ 0.98
BRF1-217ENST00000550375 USP17L3A6NCW0 530 aa21.15■□□□□ 0.98
BRF1-217ENST00000550375 USP17L4A6NCW7 530 aa21.15■□□□□ 0.98
BRF1-217ENST00000550375 USP17L1Q7RTZ2 530 aa21.15■□□□□ 0.98
BRF1-217ENST00000550375 GPC2Q8N158 579 aa21.15■□□□□ 0.98
BRF1-217ENST00000550375 GCC1Q96CN9 775 aa21.15■□□□□ 0.98
BRF1-217ENST00000550375 DBNLQ9UJU6 430 aaKnown RBP21.15■□□□□ 0.98
BRF1-217ENST00000550375 IFIT2P09913 472 aaKnown RBP21.14■□□□□ 0.98
BRF1-217ENST00000550375 CHAF1AQ13111 956 aaPredicted RBP21.14■□□□□ 0.98
BRF1-217ENST00000550375 TTLL5Q6EMB2 1281 aa21.14■□□□□ 0.98
BRF1-217ENST00000550375 MXD3Q9BW11 206 aa21.14■□□□□ 0.98
BRF1-217ENST00000550375 GNL3LQ9NVN8 582 aaKnown RBP21.14■□□□□ 0.98
BRF1-217ENST00000550375 ZBTB12Q9Y330 459 aaPredicted RBP21.14■□□□□ 0.98
BRF1-217ENST00000550375 KDM2BQ8NHM5 1336 aa21.14■□□□□ 0.97
BRF1-217ENST00000550375 ANKRD45Q5TZF3 282 aa21.13■□□□□ 0.97
BRF1-217ENST00000550375 B4GALNT3Q6L9W6 998 aa21.13■□□□□ 0.97
BRF1-217ENST00000550375 VIL1P09327 827 aaKnown RBP21.12■□□□□ 0.97
BRF1-217ENST00000550375 GMPSP49915 693 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms