RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 UQCRFS1P1P0C7P4 283 aa19.58■□□□□ 0.73
PRPF40A-212ENST00000545856 PDE4AP27815 886 aa19.58■□□□□ 0.73
PRPF40A-212ENST00000545856 CAVIN4Q5BKX8 364 aa19.58■□□□□ 0.73
PRPF40A-212ENST00000545856 DPP8Q6V1X1 898 aaPredicted RBP19.58■□□□□ 0.73
PRPF40A-212ENST00000545856 XAGE2Q96GT9 111 aa19.58■□□□□ 0.73
PRPF40A-212ENST00000545856 NEUROD6Q96NK8 337 aa19.58■□□□□ 0.73
PRPF40A-212ENST00000545856 PSMD1Q99460 953 aa19.58■□□□□ 0.73
PRPF40A-212ENST00000545856 NSFL1CQ9UNZ2 370 aaKnown RBP19.58■□□□□ 0.73
PRPF40A-212ENST00000545856 PDS5AQ29RF7 1337 aaKnown RBP19.58■□□□□ 0.72
PRPF40A-212ENST00000545856 ATP5JP18859 108 aa19.57■□□□□ 0.72
PRPF40A-212ENST00000545856 GORABQ5T7V8 394 aa19.57■□□□□ 0.72
PRPF40A-212ENST00000545856 GNL3LQ9NVN8 582 aaKnown RBP19.57■□□□□ 0.72
PRPF40A-212ENST00000545856 AKAP11Q9UKA4 1901 aa19.57■□□□□ 0.72
PRPF40A-212ENST00000545856 TAF5LO75529 589 aa19.57■□□□□ 0.72
PRPF40A-212ENST00000545856 GPSM2P81274 684 aa19.57■□□□□ 0.72
PRPF40A-212ENST00000545856 BMP2KLQ5H9B9 411 aa19.57■□□□□ 0.72
PRPF40A-212ENST00000545856 PELP1Q8IZL8 1130 aaKnown RBP19.57■□□□□ 0.72
PRPF40A-212ENST00000545856 DBNDD2Q9BQY9 259 aa19.57■□□□□ 0.72
PRPF40A-212ENST00000545856 FHDC1Q9C0D6 1143 aaPredicted RBP19.57■□□□□ 0.72
PRPF40A-212ENST00000545856 LTBP3Q9NS15 1303 aa19.56■□□□□ 0.72
PRPF40A-212ENST00000545856 UFL1O94874 794 aa19.56■□□□□ 0.72
PRPF40A-212ENST00000545856 TIMM10P62072 90 aa19.56■□□□□ 0.72
PRPF40A-212ENST00000545856 HELBQ8NG08 1087 aaPredicted RBP19.56■□□□□ 0.72
PRPF40A-212ENST00000545856 TBC1D16Q8TBP0 767 aa19.56■□□□□ 0.72
PRPF40A-212ENST00000545856 CCDC8Q9H0W5 538 aaPredicted RBP19.56■□□□□ 0.72
PRPF40A-212ENST00000545856 IRS2Q9Y4H2 1338 aa19.55■□□□□ 0.72
PRPF40A-212ENST00000545856 ARID4AP29374 1257 aaPredicted RBP19.55■□□□□ 0.72
PRPF40A-212ENST00000545856 ZNF804AQ7Z570 1209 aa19.55■□□□□ 0.72
PRPF40A-212ENST00000545856 KLHL34Q8N239 644 aa19.55■□□□□ 0.72
PRPF40A-212ENST00000545856 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.55■□□□□ 0.72
PRPF40A-212ENST00000545856 TTC22Q5TAA0 569 aa19.54■□□□□ 0.72
PRPF40A-212ENST00000545856 TMED8Q6PL24 325 aaPredicted RBP19.54■□□□□ 0.72
PRPF40A-212ENST00000545856 C16orf71Q8IYS4 520 aaPredicted RBP19.54■□□□□ 0.72
PRPF40A-212ENST00000545856 PI4K2BQ8TCG2 481 aa19.54■□□□□ 0.72
PRPF40A-212ENST00000545856 SYT17Q9BSW7 474 aa19.54■□□□□ 0.72
PRPF40A-212ENST00000545856 RFX7Q2KHR2 1363 aa19.54■□□□□ 0.72
PRPF40A-212ENST00000545856 PSME4Q14997 1843 aa19.53■□□□□ 0.72
PRPF40A-212ENST00000545856 MYH7P12883 1935 aa19.53■□□□□ 0.72
PRPF40A-212ENST00000545856 CHD4Q14839 1912 aa19.53■□□□□ 0.72
PRPF40A-212ENST00000545856 RGS3P49796 1198 aa19.53■□□□□ 0.72
PRPF40A-212ENST00000545856 TTC39AQ5SRH9 613 aa19.53■□□□□ 0.72
PRPF40A-212ENST00000545856 CCDC102BQ68D86 513 aa19.53■□□□□ 0.72
PRPF40A-212ENST00000545856 FBXO33Q7Z6M2 555 aa19.53■□□□□ 0.72
PRPF40A-212ENST00000545856 VPS37DQ86XT2 251 aa19.53■□□□□ 0.72
PRPF40A-212ENST00000545856 DOCK2Q92608 1830 aa19.53■□□□□ 0.72
PRPF40A-212ENST00000545856 C6orf229H3BNL8 230 aa19.52■□□□□ 0.72
PRPF40A-212ENST00000545856 HIBADHP31937 336 aaKnown RBP19.52■□□□□ 0.72
PRPF40A-212ENST00000545856 FKBP4Q02790 459 aaKnown RBP eCLIP19.52■□□□□ 0.72
PRPF40A-212ENST00000545856 OTUD7AQ8TE49 926 aaPredicted RBP19.52■□□□□ 0.72
PRPF40A-212ENST00000545856 ZC3H12CQ9C0D7 883 aaKnown RBP19.52■□□□□ 0.72
PRPF40A-212ENST00000545856 TLR7Q9NYK1 1049 aaKnown RBP19.52■□□□□ 0.72
PRPF40A-212ENST00000545856 POLLQ9UGP5 575 aa19.52■□□□□ 0.72
PRPF40A-212ENST00000545856 DICER1Q9UPY3 1922 aaKnown RBP19.51■□□□□ 0.71
PRPF40A-212ENST00000545856 C21orf2O43822 256 aa19.51■□□□□ 0.71
PRPF40A-212ENST00000545856 EIF5BO60841 1220 aaKnown RBP19.51■□□□□ 0.71
PRPF40A-212ENST00000545856 FAM84BQ96KN1 310 aaPredicted RBP19.51■□□□□ 0.71
PRPF40A-212ENST00000545856 HAUS7Q99871 368 aa19.51■□□□□ 0.71
PRPF40A-212ENST00000545856 COA1Q9GZY4 146 aa19.51■□□□□ 0.71
PRPF40A-212ENST00000545856 ADORA1P30542 326 aa19.5■□□□□ 0.71
PRPF40A-212ENST00000545856 TTF1Q15361 905 aaPredicted RBP19.5■□□□□ 0.71
PRPF40A-212ENST00000545856 WASHC4Q2M389 1173 aa19.5■□□□□ 0.71
PRPF40A-212ENST00000545856 LRRFIP1Q32MZ4 808 aaKnown RBP19.5■□□□□ 0.71
PRPF40A-212ENST00000545856 NLGN2Q8NFZ4 835 aa19.5■□□□□ 0.71
PRPF40A-212ENST00000545856 DENND2AQ9ULE3 1009 aa19.5■□□□□ 0.71
PRPF40A-212ENST00000545856 CCDC88AQ3V6T2 1871 aa19.5■□□□□ 0.71
PRPF40A-212ENST00000545856 IL1R1P14778 569 aa19.49■□□□□ 0.71
PRPF40A-212ENST00000545856 KIAA2012Q0VF49 1180 aa19.49■□□□□ 0.71
PRPF40A-212ENST00000545856 CNTROBQ8N137 903 aa19.49■□□□□ 0.71
PRPF40A-212ENST00000545856 TAOK3Q9H2K8 898 aa19.49■□□□□ 0.71
PRPF40A-212ENST00000545856 BCS1LQ9Y276 419 aa19.49■□□□□ 0.71
PRPF40A-212ENST00000545856 MAST2Q6P0Q8 1798 aa19.48■□□□□ 0.71
PRPF40A-212ENST00000545856 PHKA1P46020 1223 aa19.48■□□□□ 0.71
PRPF40A-212ENST00000545856 PODNQ7Z5L7 613 aa19.48■□□□□ 0.71
PRPF40A-212ENST00000545856 EVI5LQ96CN4 794 aa19.48■□□□□ 0.71
PRPF40A-212ENST00000545856 ZGPATQ8N5A5 531 aaKnown RBP19.47■□□□□ 0.71
PRPF40A-212ENST00000545856 HIP1O00291 1037 aa19.46■□□□□ 0.71
PRPF40A-212ENST00000545856 BCAMP50895 628 aa19.46■□□□□ 0.71
PRPF40A-212ENST00000545856 SPATA5Q8NB90 893 aa19.46■□□□□ 0.71
PRPF40A-212ENST00000545856 TDRD7Q8NHU6 1098 aaKnown RBP19.46■□□□□ 0.71
PRPF40A-212ENST00000545856 TBC1D22AQ8WUA7 517 aa19.46■□□□□ 0.71
PRPF40A-212ENST00000545856 SALL1Q9NSC2 1324 aa19.46■□□□□ 0.71
PRPF40A-212ENST00000545856 MCAMP43121 646 aa19.45■□□□□ 0.7
PRPF40A-212ENST00000545856 GYG1P46976 350 aa19.45■□□□□ 0.7
PRPF40A-212ENST00000545856 WDR66Q8TBY9 1149 aa19.45■□□□□ 0.7
PRPF40A-212ENST00000545856 CD209Q9NNX6 404 aa19.45■□□□□ 0.7
PRPF40A-212ENST00000545856 PAG1Q9NWQ8 432 aa19.45■□□□□ 0.7
PRPF40A-212ENST00000545856 FAM205AQ6ZU69 1335 aa19.45■□□□□ 0.7
PRPF40A-212ENST00000545856 SBF1O95248 1867 aa19.45■□□□□ 0.7
PRPF40A-212ENST00000545856 SNAP23O00161 211 aa19.44■□□□□ 0.7
PRPF40A-212ENST00000545856 GSPT1P15170 499 aaKnown RBP19.44■□□□□ 0.7
PRPF40A-212ENST00000545856 RASGRF1Q13972 1273 aa19.44■□□□□ 0.7
PRPF40A-212ENST00000545856 BOLA2Q9H3K6 86 aa19.44■□□□□ 0.7
PRPF40A-212ENST00000545856 SUGT1Q9Y2Z0 365 aa19.44■□□□□ 0.7
PRPF40A-212ENST00000545856 FRAT2O75474 233 aaPredicted RBP19.44■□□□□ 0.7
PRPF40A-212ENST00000545856 KLRK1P26718 216 aa19.44■□□□□ 0.7
PRPF40A-212ENST00000545856 FKBP1AP62942 108 aaKnown RBP19.44■□□□□ 0.7
PRPF40A-212ENST00000545856 OLFM4Q6UX06 510 aa19.44■□□□□ 0.7
PRPF40A-212ENST00000545856 TXNRD3Q86VQ6 643 aa19.44■□□□□ 0.7
PRPF40A-212ENST00000545856 BCL11AQ9H165 835 aa19.44■□□□□ 0.7
PRPF40A-212ENST00000545856 HMG20BQ9P0W2 317 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms