RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 PHKA1P46020 1223 aa16.72■□□□□ 0.27
SCARB1-209ENST00000545305 CNKSR1Q969H4 720 aa16.72■□□□□ 0.27
SCARB1-209ENST00000545305 DIAPH3Q9NSV4 1193 aa16.72■□□□□ 0.27
SCARB1-209ENST00000545305 GNL3LQ9NVN8 582 aaKnown RBP16.72■□□□□ 0.27
SCARB1-209ENST00000545305 PAG1Q9NWQ8 432 aa16.72■□□□□ 0.27
SCARB1-209ENST00000545305 RFX7Q2KHR2 1363 aa16.72■□□□□ 0.27
SCARB1-209ENST00000545305 ATP2B4P23634 1241 aa16.71■□□□□ 0.27
SCARB1-209ENST00000545305 VPS37DQ86XT2 251 aa16.71■□□□□ 0.27
SCARB1-209ENST00000545305 SP8Q8IXZ3 490 aa16.71■□□□□ 0.27
SCARB1-209ENST00000545305 GGA1Q9UJY5 639 aa16.71■□□□□ 0.27
SCARB1-209ENST00000545305 ATP6V0A2Q9Y487 856 aa16.71■□□□□ 0.27
SCARB1-209ENST00000545305 DLEC1Q9Y238 1755 aa16.71■□□□□ 0.27
SCARB1-209ENST00000545305 KIF13BQ9NQT8 1826 aa16.7■□□□□ 0.26
SCARB1-209ENST00000545305 CACNA1SQ13698 1873 aa16.7■□□□□ 0.26
SCARB1-209ENST00000545305 GOLIM4O00461 696 aa16.7■□□□□ 0.26
SCARB1-209ENST00000545305 UFL1O94874 794 aa16.7■□□□□ 0.26
SCARB1-209ENST00000545305 CHMLP26374 656 aa16.7■□□□□ 0.26
SCARB1-209ENST00000545305 CHRNA5P30532 468 aa16.7■□□□□ 0.26
SCARB1-209ENST00000545305 MFAP1P55081 439 aaKnown RBP16.7■□□□□ 0.26
SCARB1-209ENST00000545305 GPSM2P81274 684 aa16.7■□□□□ 0.26
SCARB1-209ENST00000545305 FKBP4Q02790 459 aaKnown RBP eCLIP16.7■□□□□ 0.26
SCARB1-209ENST00000545305 NSFL1CQ9UNZ2 370 aaKnown RBP16.7■□□□□ 0.26
SCARB1-209ENST00000545305 BCAMP50895 628 aa16.69■□□□□ 0.26
SCARB1-209ENST00000545305 LRRFIP1Q32MZ4 808 aaKnown RBP16.69■□□□□ 0.26
SCARB1-209ENST00000545305 PRPF40BQ6NWY9 871 aaKnown RBP16.69■□□□□ 0.26
SCARB1-209ENST00000545305 TICAM2Q86XR7 235 aa16.69■□□□□ 0.26
SCARB1-209ENST00000545305 RUFY2Q8WXA3 655 aa16.69■□□□□ 0.26
SCARB1-209ENST00000545305 SNRKQ9NRH2 765 aa16.69■□□□□ 0.26
SCARB1-209ENST00000545305 PODXL2Q9NZ53 605 aa16.69■□□□□ 0.26
SCARB1-209ENST00000545305 REC8O95072 547 aa16.68■□□□□ 0.26
SCARB1-209ENST00000545305 MCAMP43121 646 aa16.68■□□□□ 0.26
SCARB1-209ENST00000545305 GYG1P46976 350 aa16.68■□□□□ 0.26
SCARB1-209ENST00000545305 SCARF1Q14162 830 aa16.68■□□□□ 0.26
SCARB1-209ENST00000545305 TTF1Q15361 905 aaPredicted RBP16.68■□□□□ 0.26
SCARB1-209ENST00000545305 KBTBD3Q8NAB2 608 aa16.68■□□□□ 0.26
SCARB1-209ENST00000545305 EDC3Q96F86 508 aaKnown RBP16.68■□□□□ 0.26
SCARB1-209ENST00000545305 ESYT1Q9BSJ8 1104 aa16.68■□□□□ 0.26
SCARB1-209ENST00000545305 NDUFB9Q9Y6M9 179 aa16.68■□□□□ 0.26
SCARB1-209ENST00000545305 SEMA3EO15041 775 aa16.67■□□□□ 0.26
SCARB1-209ENST00000545305 SEC24BO95487 1268 aa16.67■□□□□ 0.26
SCARB1-209ENST00000545305 HIBADHP31937 336 aaKnown RBP16.67■□□□□ 0.26
SCARB1-209ENST00000545305 ZAP70P43403 619 aa16.67■□□□□ 0.26
SCARB1-209ENST00000545305 RASGRF1Q13972 1273 aa16.67■□□□□ 0.26
SCARB1-209ENST00000545305 C15orf52Q6ZUT6 534 aaKnown RBP16.67■□□□□ 0.26
SCARB1-209ENST00000545305 ZNF804AQ7Z570 1209 aa16.67■□□□□ 0.26
SCARB1-209ENST00000545305 SPATA5Q8NB90 893 aa16.67■□□□□ 0.26
SCARB1-209ENST00000545305 LTBP1Q14766 1721 aa16.67■□□□□ 0.26
SCARB1-209ENST00000545305 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
SCARB1-209ENST00000545305 FRAT2O75474 233 aaPredicted RBP16.66■□□□□ 0.26
SCARB1-209ENST00000545305 TGFB2P61812 414 aa16.66■□□□□ 0.26
SCARB1-209ENST00000545305 DPP8Q6V1X1 898 aaPredicted RBP16.66■□□□□ 0.26
SCARB1-209ENST00000545305 FBXO33Q7Z6M2 555 aa16.66■□□□□ 0.26
SCARB1-209ENST00000545305 MPNDQ8N594 471 aa16.66■□□□□ 0.26
SCARB1-209ENST00000545305 FAM84BQ96KN1 310 aaPredicted RBP16.66■□□□□ 0.26
SCARB1-209ENST00000545305 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.66■□□□□ 0.261e-14■□□□□ 9
SCARB1-209ENST00000545305 HMG20BQ9P0W2 317 aa16.66■□□□□ 0.26
SCARB1-209ENST00000545305 DENND2AQ9ULE3 1009 aa16.66■□□□□ 0.26
SCARB1-209ENST00000545305 AKAP11Q9UKA4 1901 aa16.66■□□□□ 0.26
SCARB1-209ENST00000545305 RAD50Q92878 1312 aa16.66■□□□□ 0.26
SCARB1-209ENST00000545305 MED23Q9ULK4 1368 aa16.65■□□□□ 0.26
SCARB1-209ENST00000545305 WTIPA6NIX2 430 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-209ENST00000545305 DPEP1P16444 411 aa16.65■□□□□ 0.26
SCARB1-209ENST00000545305 KLRK1P26718 216 aa16.65■□□□□ 0.26
SCARB1-209ENST00000545305 CC2D2BQ6DHV5 1058 aa16.65■□□□□ 0.26
SCARB1-209ENST00000545305 ZSCAN25Q6NSZ9 544 aa16.65■□□□□ 0.26
SCARB1-209ENST00000545305 CWC27Q6UX04 472 aaKnown RBP16.65■□□□□ 0.26
SCARB1-209ENST00000545305 PI16Q6UXB8 463 aa16.65■□□□□ 0.26
SCARB1-209ENST00000545305 SLC51AQ86UW1 340 aa16.65■□□□□ 0.26
SCARB1-209ENST00000545305 TTLL6Q8N841 843 aa16.65■□□□□ 0.26
SCARB1-209ENST00000545305 TBC1D16Q8TBP0 767 aa16.65■□□□□ 0.26
SCARB1-209ENST00000545305 RBM19Q9Y4C8 960 aaKnown RBP16.65■□□□□ 0.26
SCARB1-209ENST00000545305 SLX4Q8IY92 1834 aa16.65■□□□□ 0.26
SCARB1-209ENST00000545305 MYH13Q9UKX3 1938 aa16.64■□□□□ 0.26
SCARB1-209ENST00000545305 ZFYP08048 801 aaPredicted RBP16.64■□□□□ 0.25
SCARB1-209ENST00000545305 NMIQ13287 307 aaPredicted RBP16.64■□□□□ 0.25
SCARB1-209ENST00000545305 KLHL34Q8N239 644 aa16.64■□□□□ 0.25
SCARB1-209ENST00000545305 EYA3Q99504 573 aa16.64■□□□□ 0.25
SCARB1-209ENST00000545305 SGIP1Q9BQI5 828 aa16.64■□□□□ 0.25
SCARB1-209ENST00000545305 ANTXR1Q9H6X2 564 aa16.64■□□□□ 0.25
SCARB1-209ENST00000545305 PDS5AQ29RF7 1337 aaKnown RBP16.64■□□□□ 0.25
SCARB1-209ENST00000545305 IRS2Q9Y4H2 1338 aa16.64■□□□□ 0.25
SCARB1-209ENST00000545305 A0A0G2JLW4 131 aa16.63■□□□□ 0.25
SCARB1-209ENST00000545305 WASHC4Q2M389 1173 aa16.63■□□□□ 0.25
SCARB1-209ENST00000545305 GRIPAP1Q4V328 841 aa16.63■□□□□ 0.25
SCARB1-209ENST00000545305 SPON1Q9HCB6 807 aa16.63■□□□□ 0.25
SCARB1-209ENST00000545305 ZNF219Q9P2Y4 722 aaPredicted RBP16.63■□□□□ 0.25
SCARB1-209ENST00000545305 PPP1R1BQ9UD71 204 aaPredicted RBP16.63■□□□□ 0.25
SCARB1-209ENST00000545305 POLLQ9UGP5 575 aa16.63■□□□□ 0.25
SCARB1-209ENST00000545305 IQSEC3Q9UPP2 1182 aaPredicted RBP16.63■□□□□ 0.25
SCARB1-209ENST00000545305 CD2APQ9Y5K6 639 aa16.63■□□□□ 0.25
SCARB1-209ENST00000545305 KIAA1551Q9HCM1 1747 aa16.62■□□□□ 0.25
SCARB1-209ENST00000545305 ZBTB22O15209 634 aa16.62■□□□□ 0.25
SCARB1-209ENST00000545305 RNF113AO15541 343 aaKnown RBP16.62■□□□□ 0.25
SCARB1-209ENST00000545305 SGSM2O43147 1006 aa16.62■□□□□ 0.25
SCARB1-209ENST00000545305 CYP2E1P05181 493 aaPredicted RBP16.62■□□□□ 0.25
SCARB1-209ENST00000545305 PTGER2P43116 358 aa16.62■□□□□ 0.25
SCARB1-209ENST00000545305 KIAA1211Q6ZU35 1233 aa16.62■□□□□ 0.25
SCARB1-209ENST00000545305 GPR101Q96P66 508 aaPredicted RBP16.62■□□□□ 0.25
SCARB1-209ENST00000545305 C22orf23Q9BZE7 217 aa16.62■□□□□ 0.25
SCARB1-209ENST00000545305 ANO2Q9NQ90 1003 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms