RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 PRDM6Q9NQX0 595 aa9.21□□□□□ -0.94
LEMD3-205ENST00000544506 COL9A3Q14050 684 aaPredicted RBP9.2□□□□□ -0.94
LEMD3-205ENST00000544506 KIAA0319Q5VV43 1072 aa9.2□□□□□ -0.94
LEMD3-205ENST00000544506 GDF6Q6KF10 455 aaPredicted RBP9.2□□□□□ -0.94
LEMD3-205ENST00000544506 ADAMTSL4Q6UY14 1074 aa9.2□□□□□ -0.94
LEMD3-205ENST00000544506 TMEM102Q8N9M5 508 aaPredicted RBP9.2□□□□□ -0.94
LEMD3-205ENST00000544506 FBF1Q8TES7 1133 aa9.2□□□□□ -0.94
LEMD3-205ENST00000544506 PDE2AO00408 941 aaPredicted RBP9.19□□□□□ -0.94
LEMD3-205ENST00000544506 GADD45BO75293 160 aaPredicted RBP9.19□□□□□ -0.94
LEMD3-205ENST00000544506 NID1P14543 1247 aa9.19□□□□□ -0.94
LEMD3-205ENST00000544506 TAGLNQ01995 201 aaKnown RBP9.19□□□□□ -0.94
LEMD3-205ENST00000544506 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.19□□□□□ -0.94
LEMD3-205ENST00000544506 LINC00114Q6XXX2 140 aa9.19□□□□□ -0.94
LEMD3-205ENST00000544506 POP1Q99575 1024 aaKnown RBP9.19□□□□□ -0.94
LEMD3-205ENST00000544506 NLRP2Q9NX02 1062 aa9.19□□□□□ -0.94
LEMD3-205ENST00000544506 PRPF40AO75400 957 aaKnown RBP9.18□□□□□ -0.94
LEMD3-205ENST00000544506 RGS22Q8NE09 1264 aa9.18□□□□□ -0.94
LEMD3-205ENST00000544506 BCL2L13Q9BXK5 485 aa9.18□□□□□ -0.94
LEMD3-205ENST00000544506 LACRTQ9GZZ8 138 aa9.18□□□□□ -0.94
LEMD3-205ENST00000544506 EHD4Q9H223 541 aa9.18□□□□□ -0.94
LEMD3-205ENST00000544506 SUV39H2Q9H5I1 410 aa9.18□□□□□ -0.94
LEMD3-205ENST00000544506 LIN7BQ9HAP6 207 aa9.18□□□□□ -0.94
LEMD3-205ENST00000544506 MKL2Q9ULH7 1088 aa9.18□□□□□ -0.94
LEMD3-205ENST00000544506 CNTNAP5Q8WYK1 1306 aa9.17□□□□□ -0.94
LEMD3-205ENST00000544506 FAM181BA6NEQ2 426 aa9.17□□□□□ -0.94
LEMD3-205ENST00000544506 GRM2Q14416 872 aa9.17□□□□□ -0.94
LEMD3-205ENST00000544506 PODNQ7Z5L7 613 aa9.17□□□□□ -0.94
LEMD3-205ENST00000544506 NXPE3Q969Y0 559 aa9.17□□□□□ -0.94
LEMD3-205ENST00000544506 TRIM11Q96F44 468 aa9.17□□□□□ -0.94
LEMD3-205ENST00000544506 TCF12Q99081 682 aa9.17□□□□□ -0.94
LEMD3-205ENST00000544506 BHLHE41Q9C0J9 482 aaPredicted RBP9.17□□□□□ -0.94
LEMD3-205ENST00000544506 RNF19AQ9NV58 838 aa9.17□□□□□ -0.94
LEMD3-205ENST00000544506 METTL12A8MUP2 240 aa9.16□□□□□ -0.94
LEMD3-205ENST00000544506 MSL1Q68DK7 614 aa9.16□□□□□ -0.94
LEMD3-205ENST00000544506 CCNJLQ8IV13 435 aa9.16□□□□□ -0.94
LEMD3-205ENST00000544506 DUSP9Q99956 384 aaKnown RBP9.16□□□□□ -0.94
LEMD3-205ENST00000544506 STK17AQ9UEE5 414 aa9.16□□□□□ -0.94
LEMD3-205ENST00000544506 GNB5O14775 395 aa9.15□□□□□ -0.94
LEMD3-205ENST00000544506 PTPRAP18433 802 aa9.15□□□□□ -0.94
LEMD3-205ENST00000544506 BAG6P46379 1132 aa9.15□□□□□ -0.94
LEMD3-205ENST00000544506 FGD1P98174 961 aa9.15□□□□□ -0.94
LEMD3-205ENST00000544506 GLIS3Q8NEA6 775 aa9.15□□□□□ -0.94
LEMD3-205ENST00000544506 ASAP3Q8TDY4 903 aa9.15□□□□□ -0.94
LEMD3-205ENST00000544506 GIPC2Q8TF65 315 aa9.15□□□□□ -0.94
LEMD3-205ENST00000544506 ADAM19Q9H013 955 aa9.15□□□□□ -0.94
LEMD3-205ENST00000544506 GRIA4P48058 902 aa9.14□□□□□ -0.95
LEMD3-205ENST00000544506 PRPF40BQ6NWY9 871 aaKnown RBP9.14□□□□□ -0.95
LEMD3-205ENST00000544506 WFDC8Q8IUA0 241 aa9.14□□□□□ -0.95
LEMD3-205ENST00000544506 IL22RA1Q8N6P7 574 aa9.14□□□□□ -0.95
LEMD3-205ENST00000544506 BEND7Q8N7W2 519 aaPredicted RBP9.14□□□□□ -0.95
LEMD3-205ENST00000544506 FOXD4L4Q8WXT5 416 aaPredicted RBP9.14□□□□□ -0.95
LEMD3-205ENST00000544506 SCARF2Q96GP6 870 aaPredicted RBP9.14□□□□□ -0.95
LEMD3-205ENST00000544506 BCO2Q9BYV7 579 aa9.14□□□□□ -0.95
LEMD3-205ENST00000544506 ABCB6Q9NP58 842 aa9.14□□□□□ -0.95
LEMD3-205ENST00000544506 SH2B1Q9NRF2 756 aaPredicted RBP9.14□□□□□ -0.95
LEMD3-205ENST00000544506 SPG7Q9UQ90 795 aa9.14□□□□□ -0.95
LEMD3-205ENST00000544506 PIK3R2O00459 728 aa9.13□□□□□ -0.95
LEMD3-205ENST00000544506 EPHA1P21709 976 aa9.13□□□□□ -0.95
LEMD3-205ENST00000544506 CDC27P30260 824 aa9.13□□□□□ -0.95
LEMD3-205ENST00000544506 NXPE4Q6UWF7 544 aa9.13□□□□□ -0.95
LEMD3-205ENST00000544506 CACTIN-AS1Q8N1I8 211 aa9.13□□□□□ -0.95
LEMD3-205ENST00000544506 PLVAPQ9BX97 442 aa9.13□□□□□ -0.95
LEMD3-205ENST00000544506 PARP2Q9UGN5 583 aa9.13□□□□□ -0.95
LEMD3-205ENST00000544506 SOX13Q9UN79 622 aa9.13□□□□□ -0.95
LEMD3-205ENST00000544506 TRAK1Q9UPV9 953 aa9.13□□□□□ -0.95
LEMD3-205ENST00000544506 GNA15P30679 374 aa9.12□□□□□ -0.95
LEMD3-205ENST00000544506 SPRED3Q2MJR0 410 aa9.12□□□□□ -0.95
LEMD3-205ENST00000544506 ILDR2Q71H61 639 aa9.12□□□□□ -0.95
LEMD3-205ENST00000544506 DMRTC2Q8IXT2 367 aaPredicted RBP9.12□□□□□ -0.95
LEMD3-205ENST00000544506 BSNDQ8WZ55 320 aa9.12□□□□□ -0.95
LEMD3-205ENST00000544506 OSBPL7Q9BZF2 842 aa9.12□□□□□ -0.95
LEMD3-205ENST00000544506 MUC3BQ9H195 1237 aa9.12□□□□□ -0.95
LEMD3-205ENST00000544506 A0A096LPE4 126 aa9.11□□□□□ -0.95
LEMD3-205ENST00000544506 A0A1W2PPZ6 126 aa9.11□□□□□ -0.95
LEMD3-205ENST00000544506 FAM177BA6PVY3 158 aa9.11□□□□□ -0.95
LEMD3-205ENST00000544506 TRAPPC3LQ5T215 181 aa9.11□□□□□ -0.95
LEMD3-205ENST00000544506 TXNDC11Q6PKC3 985 aa9.11□□□□□ -0.95
LEMD3-205ENST00000544506 C12orf49Q9H741 205 aa9.11□□□□□ -0.95
LEMD3-205ENST00000544506 TMEM238LA0A1B0GVL6 79 aa9.1□□□□□ -0.95
LEMD3-205ENST00000544506 ZNF16P17020 682 aaPredicted RBP9.1□□□□□ -0.95
LEMD3-205ENST00000544506 ZNF326Q5BKZ1 582 aaKnown RBP9.1□□□□□ -0.95
LEMD3-205ENST00000544506 FAM161BQ96MY7 647 aa9.1□□□□□ -0.95
LEMD3-205ENST00000544506 FRMD6Q96NE9 622 aa9.1□□□□□ -0.95
LEMD3-205ENST00000544506 NOP53Q9NZM5 478 aaKnown RBP9.1□□□□□ -0.95
LEMD3-205ENST00000544506 PPME1Q9Y570 386 aa9.1□□□□□ -0.95
LEMD3-205ENST00000544506 H3BRJ5 948 aa9.09□□□□□ -0.95
LEMD3-205ENST00000544506 LINC01387J3KSC0 135 aa9.09□□□□□ -0.95
LEMD3-205ENST00000544506 GIPC1O14908 333 aa9.09□□□□□ -0.95
LEMD3-205ENST00000544506 ITPKAP23677 461 aa9.09□□□□□ -0.95
LEMD3-205ENST00000544506 CDC25BP30305 580 aa9.09□□□□□ -0.95
LEMD3-205ENST00000544506 FCGRTP55899 365 aa9.09□□□□□ -0.95
LEMD3-205ENST00000544506 DAB2P98082 770 aa9.09□□□□□ -0.95
LEMD3-205ENST00000544506 XPCQ01831 940 aaPredicted RBP9.09□□□□□ -0.95
LEMD3-205ENST00000544506 VN1R5Q7Z5H4 357 aa9.09□□□□□ -0.95
LEMD3-205ENST00000544506 A0A0A0MRY4 1105 aa9.08□□□□□ -0.96
LEMD3-205ENST00000544506 RBM47A0AV96 593 aaKnown RBP9.08□□□□□ -0.96
LEMD3-205ENST00000544506 SPDYE3A6NKU9 549 aa9.08□□□□□ -0.96
LEMD3-205ENST00000544506 FAM229AH3BQW9 127 aa9.08□□□□□ -0.96
LEMD3-205ENST00000544506 CABP4P57796 275 aa9.08□□□□□ -0.96
LEMD3-205ENST00000544506 PSMD2Q13200 908 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms