RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CCDC94Q9BW85 323 aaPredicted RBP17.46■□□□□ 0.39
DDX55-209ENST00000542286 E7EWF7 191 aa17.45■□□□□ 0.38
DDX55-209ENST00000542286 FOXP2O15409 715 aa17.45■□□□□ 0.38
DDX55-209ENST00000542286 ANKRD1Q15327 319 aa17.45■□□□□ 0.38
DDX55-209ENST00000542286 TSGA10IPQ3SY00 556 aa17.45■□□□□ 0.38
DDX55-209ENST00000542286 KIF6Q6ZMV9 814 aa17.45■□□□□ 0.38
DDX55-209ENST00000542286 PUS7LQ9H0K6 701 aaKnown RBP17.45■□□□□ 0.38
DDX55-209ENST00000542286 UBR2Q8IWV8 1755 aa17.45■□□□□ 0.38
DDX55-209ENST00000542286 CTDNEP1O95476 244 aa17.45■□□□□ 0.38
DDX55-209ENST00000542286 KRT85P78386 507 aa17.45■□□□□ 0.38
DDX55-209ENST00000542286 A0A087WWV3 80 aa17.45■□□□□ 0.38
DDX55-209ENST00000542286 RNF113AO15541 343 aaKnown RBP17.45■□□□□ 0.38
DDX55-209ENST00000542286 OTUD7BQ6GQQ9 843 aa17.45■□□□□ 0.38
DDX55-209ENST00000542286 SH3TC1Q8TE82 1336 aa17.44■□□□□ 0.38
DDX55-209ENST00000542286 GJB4Q9NTQ9 266 aa17.44■□□□□ 0.38
DDX55-209ENST00000542286 STRCQ7RTU9 1775 aa17.44■□□□□ 0.38
DDX55-209ENST00000542286 PHF14O94880 888 aa17.44■□□□□ 0.38
DDX55-209ENST00000542286 ITGA6P23229 1130 aa17.44■□□□□ 0.38
DDX55-209ENST00000542286 IFIT5Q13325 482 aaKnown RBP17.44■□□□□ 0.38
DDX55-209ENST00000542286 ACSBG1Q96GR2 724 aa17.44■□□□□ 0.38
DDX55-209ENST00000542286 SPATA32Q96LK8 384 aa17.44■□□□□ 0.38
DDX55-209ENST00000542286 DACT1Q9NYF0 836 aa17.44■□□□□ 0.38
DDX55-209ENST00000542286 ABCC6O95255 1503 aa17.44■□□□□ 0.38
DDX55-209ENST00000542286 TNS2Q63HR2 1409 aa17.43■□□□□ 0.38
DDX55-209ENST00000542286 H3BQV1 296 aa17.43■□□□□ 0.38
DDX55-209ENST00000542286 KRT32Q14532 448 aa17.43■□□□□ 0.38
DDX55-209ENST00000542286 IFFO2Q5TF58 517 aa17.43■□□□□ 0.38
DDX55-209ENST00000542286 ADCY5O95622 1261 aa17.43■□□□□ 0.38
DDX55-209ENST00000542286 DMTNQ08495 405 aa17.43■□□□□ 0.38
DDX55-209ENST00000542286 METTL24Q5JXM2 366 aa17.43■□□□□ 0.38
DDX55-209ENST00000542286 LDHAL6AQ6ZMR3 332 aa17.43■□□□□ 0.38
DDX55-209ENST00000542286 PGBD1Q96JS3 809 aa17.43■□□□□ 0.38
DDX55-209ENST00000542286 TTC12Q9H892 705 aaPredicted RBP17.43■□□□□ 0.38
DDX55-209ENST00000542286 PALLDQ8WX93 1383 aa17.43■□□□□ 0.38
DDX55-209ENST00000542286 DHX32Q7L7V1 743 aaKnown RBP17.42■□□□□ 0.38
DDX55-209ENST00000542286 NLRP10Q86W26 655 aa17.42■□□□□ 0.38
DDX55-209ENST00000542286 FAM184AQ8NB25 1140 aa17.42■□□□□ 0.38
DDX55-209ENST00000542286 LEO1Q8WVC0 666 aaPredicted RBP17.42■□□□□ 0.38
DDX55-209ENST00000542286 ADAMTS2O95450 1211 aa17.42■□□□□ 0.38
DDX55-209ENST00000542286 CCDC158Q5M9N0 1113 aa17.42■□□□□ 0.38
DDX55-209ENST00000542286 UTP14CQ5TAP6 766 aaKnown RBP17.42■□□□□ 0.38
DDX55-209ENST00000542286 FUCA2Q9BTY2 467 aa17.42■□□□□ 0.38
DDX55-209ENST00000542286 TRMT112Q9UI30 125 aaKnown RBP17.42■□□□□ 0.38
DDX55-209ENST00000542286 LAMA4Q16363 1823 aa17.41■□□□□ 0.38
DDX55-209ENST00000542286 PTPDC1A2A3K4 754 aa17.41■□□□□ 0.38
DDX55-209ENST00000542286 NR1I2O75469 434 aa17.41■□□□□ 0.38
DDX55-209ENST00000542286 ZSCAN20P17040 1043 aaPredicted RBP17.41■□□□□ 0.38
DDX55-209ENST00000542286 MCAMP43121 646 aa17.41■□□□□ 0.38
DDX55-209ENST00000542286 NSUN7Q8NE18 718 aaKnown RBP17.41■□□□□ 0.38
DDX55-209ENST00000542286 HELLSQ9NRZ9 838 aa17.41■□□□□ 0.38
DDX55-209ENST00000542286 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.41■□□□□ 0.38
DDX55-209ENST00000542286 STARD3NLO95772 234 aa17.41■□□□□ 0.38
DDX55-209ENST00000542286 ZBTB38Q8NAP3 1195 aaPredicted RBP17.41■□□□□ 0.38
DDX55-209ENST00000542286 TTLL11Q8NHH1 800 aa17.41■□□□□ 0.38
DDX55-209ENST00000542286 INCENPQ9NQS7 918 aa17.41■□□□□ 0.38
DDX55-209ENST00000542286 CNNM1Q9NRU3 951 aa17.41■□□□□ 0.38
DDX55-209ENST00000542286 MAP3K15Q6ZN16 1313 aa17.41■□□□□ 0.38
DDX55-209ENST00000542286 PCCAP05165 728 aaPredicted RBP17.4■□□□□ 0.38
DDX55-209ENST00000542286 PDCP20941 246 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 DNTTIP2Q5QJE6 756 aaKnown RBP17.4■□□□□ 0.38
DDX55-209ENST00000542286 ERCC4Q92889 916 aaPredicted RBP17.4■□□□□ 0.38
DDX55-209ENST00000542286 GOLGA6L4A6NEF3 574 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 FGAP02671 866 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 CYP19A1P11511 503 aaPredicted RBP17.4■□□□□ 0.38
DDX55-209ENST00000542286 RESTQ13127 1097 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 ATP2B3Q16720 1220 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 GIGYF2Q6Y7W6 1299 aaKnown RBP17.4■□□□□ 0.38
DDX55-209ENST00000542286 SMIM5Q71RC9 77 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 SPC24Q8NBT2 197 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 GPR108Q9NPR9 543 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 ABCA3Q99758 1704 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 IRS4O14654 1257 aaPredicted RBP17.4■□□□□ 0.38
DDX55-209ENST00000542286 CIAO1O76071 339 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 RXRAP19793 462 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 EXOSC10Q01780 885 aaKnown RBP17.4■□□□□ 0.38
DDX55-209ENST00000542286 KIAA2012Q0VF49 1180 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 MYRIPQ8NFW9 859 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 BICD2Q8TD16 824 aa17.4■□□□□ 0.38
DDX55-209ENST00000542286 LUZP1Q86V48 1076 aa17.39■□□□□ 0.37
DDX55-209ENST00000542286 STK11IPQ8N1F8 1099 aa17.39■□□□□ 0.37
DDX55-209ENST00000542286 DSCC1Q9BVC3 393 aa17.39■□□□□ 0.37
DDX55-209ENST00000542286 ALDH8A1Q9H2A2 487 aaPredicted RBP17.39■□□□□ 0.37
DDX55-209ENST00000542286 UBN2Q6ZU65 1347 aa17.39■□□□□ 0.37
DDX55-209ENST00000542286 GOLGB1Q14789 3259 aaKnown RBP17.39■□□□□ 0.37
DDX55-209ENST00000542286 KCNQ4P56696 695 aa17.39■□□□□ 0.37
DDX55-209ENST00000542286 TSC1Q92574 1164 aa17.39■□□□□ 0.37
DDX55-209ENST00000542286 PAPPAQ13219 1627 aa17.38■□□□□ 0.37
DDX55-209ENST00000542286 IDH1O75874 414 aaKnown RBP17.38■□□□□ 0.37
DDX55-209ENST00000542286 PDIA3P30101 505 aaKnown RBP17.38■□□□□ 0.37
DDX55-209ENST00000542286 PHKA1P46020 1223 aa17.38■□□□□ 0.37
DDX55-209ENST00000542286 FBXW7Q969H0 707 aa17.38■□□□□ 0.37
DDX55-209ENST00000542286 NUP62CLQ9H1M0 184 aa17.38■□□□□ 0.37
DDX55-209ENST00000542286 RIPOR2Q9Y4F9 1068 aa17.38■□□□□ 0.37
DDX55-209ENST00000542286 RIC1Q4ADV7 1423 aa17.38■□□□□ 0.37
DDX55-209ENST00000542286 PFKFB2O60825 505 aa17.38■□□□□ 0.37
DDX55-209ENST00000542286 CSF1RP07333 972 aa17.38■□□□□ 0.37
DDX55-209ENST00000542286 PIH1D3Q9NQM4 214 aaKnown RBP17.37■□□□□ 0.37
DDX55-209ENST00000542286 GPAA1O43292 621 aa17.37■□□□□ 0.37
DDX55-209ENST00000542286 DZIP3Q86Y13 1208 aaKnown RBP17.37■□□□□ 0.37
DDX55-209ENST00000542286 SEC31BQ9NQW1 1179 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms