RNA–Protein interactions for RNA: ENST00000539770.5

ARL6IP4-216, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 1 (best)

Gene ARL6IP4, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-216	ENST00000539770	HSPA1B	P0DMV9	641 aa	Known RBP	27.93	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	CNOT7	Q9UIV1	285 aa	Known RBP	27.93	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	SHTN1	A0MZ66	631 aa		27.91	■■■□□ 2.06
ARL6IP4-216	ENST00000539770		H7C1D1	291 aa		27.91	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	CAPN15	O75808	1086 aa		27.91	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	ZKSCAN2	Q63HK3	967 aa		27.91	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	MAP1S	Q66K74	1059 aa	Predicted RBP	27.91	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	MEIS3	Q99687	375 aa		27.91	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	PUS3	Q9BZE2	481 aa	Known RBP	27.91	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	HDAC5	Q9UQL6	1122 aa		27.91	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	PASK	Q96RG2	1323 aa		27.91	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	IRS2	Q9Y4H2	1338 aa		27.91	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	USP17L3	A6NCW0	530 aa		27.9	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	USP17L4	A6NCW7	530 aa		27.9	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	SNAP23	O00161	211 aa		27.9	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	RSBN1L	Q6PCB5	846 aa	Predicted RBP	27.9	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	C15orf52	Q6ZUT6	534 aa	Known RBP	27.9	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	USP17L1	Q7RTZ2	530 aa		27.9	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	TRPM4	Q8TD43	1214 aa		27.9	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	TNN	Q9UQP3	1299 aa		27.9	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	PLIN1	O60240	522 aa		27.89	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	CNTROB	Q8N137	903 aa		27.89	■■■□□ 2.06
ARL6IP4-216	ENST00000539770	MROH5	Q6ZUA9	1318 aa		27.89	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	ITGBL1	O95965	494 aa	Predicted RBP	27.88	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	AGBL3	Q8NEM8	1001 aa		27.88	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	CLUAP1	Q96AJ1	413 aa		27.88	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	RIPOR2	Q9Y4F9	1068 aa		27.88	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	LRRFIP2	Q9Y608	721 aa	Known RBP	27.88	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	GNAI3	P08754	354 aa		27.87	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	ZNF646	O15015	1829 aa	Predicted RBP	27.87	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	LRRC24	Q50LG9	513 aa		27.86	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	KLHDC4	Q8TBB5	520 aa		27.86	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	RFX5	P48382	616 aa	Predicted RBP	27.85	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	HIRA	P54198	1017 aa	Predicted RBP	27.85	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	DACT2	Q5SW24	774 aa		27.85	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	STRIP1	Q5VSL9	837 aa		27.85	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	ZNF804A	Q7Z570	1209 aa		27.85	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	ZC3H15	Q8WU90	426 aa	Known RBP	27.85	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	FBXW7	Q969H0	707 aa		27.85	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	UBE4A	Q14139	1066 aa		27.84	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	27.84	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	METTL24	Q5JXM2	366 aa		27.84	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	SAMD7	Q7Z3H4	446 aa		27.84	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	GML	Q99445	158 aa		27.84	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	CD209	Q9NNX6	404 aa		27.84	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	CREBZF	Q9NS37	354 aa		27.84	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	MYO3B	Q8WXR4	1341 aa		27.84	■■■□□ 2.05
ARL6IP4-216	ENST00000539770	EGFR	P00533	1210 aa		27.82	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	ZNF280A	P59817	542 aa	Predicted RBP	27.82	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	PTPN12	Q05209	780 aa	Known RBP	27.82	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	KIF4B	Q2VIQ3	1234 aa		27.82	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	FTSJ3	Q8IY81	847 aa	Known RBP	27.82	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	TMEM57	Q8N5G2	664 aa		27.82	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	VGLL2	Q8N8G2	317 aa		27.82	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	PGAP2	Q9UHJ9	254 aa		27.82	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	EYA2	O00167	538 aa		27.8	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	USP17L8	P0C7I0	530 aa		27.8	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	IL1R1	P14778	569 aa		27.8	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	TTLL5	Q6EMB2	1281 aa		27.8	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	MXD3	Q9BW11	206 aa		27.8	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	PDE8B	O95263	885 aa		27.79	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	GTF2I	P78347	998 aa		27.79	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	RBM26	Q5T8P6	1007 aa	Known RBP	27.79	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	TMEM88B	A6NKF7	163 aa		27.78	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	DZIP1L	Q8IYY4	767 aa	Known RBP	27.78	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	FBXO3	Q9UK99	471 aa		27.78	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	TRAF5	O00463	557 aa		27.77	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	CIAO1	O76071	339 aa		27.77	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	GNAI2	P04899	355 aa		27.77	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	MTX1	Q13505	466 aa		27.77	■■■□□ 2.04
ARL6IP4-216	ENST00000539770	GYG1	P46976	350 aa		27.76	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	PUM3	Q15397	648 aa	Known RBP	27.76	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	GLIS2	Q9BZE0	524 aa	Predicted RBP	27.76	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	SIL1	Q9H173	461 aa		27.76	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	MYOZ2	Q9NPC6	264 aa		27.76	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	RLBP1	P12271	317 aa		27.75	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	HIBADH	P31937	336 aa	Known RBP	27.75	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	ATG9A	Q7Z3C6	839 aa		27.75	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	OGFOD1	Q8N543	542 aa		27.75	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	FAM84B	Q96KN1	310 aa	Predicted RBP	27.75	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	SRGAP3	O43295	1099 aa		27.74	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	FMR1	Q06787	632 aa	Known RBP eCLIP	27.74	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	CDC37L1	Q7L3B6	337 aa		27.74	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	ITPRIP	Q8IWB1	547 aa		27.74	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	COPRS	Q9NQ92	184 aa		27.74	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	GGA3	Q9NZ52	723 aa		27.74	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	FGFR2	P21802	821 aa		27.73	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	MMP14	P50281	582 aa		27.73	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	PA2G4	Q9UQ80	394 aa	Known RBP	27.73	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	CAVIN4	Q5BKX8	364 aa		27.72	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	VPS37D	Q86XT2	251 aa		27.72	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	KIAA0825	Q8IV33	1275 aa		27.72	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	TDRD7	Q8NHU6	1098 aa	Known RBP	27.72	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	DCPS	Q96C86	337 aa	Known RBP	27.72	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	CNTNAP1	P78357	1384 aa		27.72	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	FAM205A	Q6ZU69	1335 aa		27.71	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	IFIT1	P09914	478 aa	Known RBP	27.71	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	IL15	P40933	162 aa	Predicted RBP	27.71	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	FKBP1A	P62942	108 aa	Known RBP	27.71	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	KRT26	Q7Z3Y9	468 aa		27.71	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms