RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 VGLL2Q8N8G2 317 aa13.42□□□□□ -0.26
HMGA2-209ENST00000539662 SMC1BQ8NDV3 1235 aa13.42□□□□□ -0.26
HMGA2-209ENST00000539662 TRPM4Q8TD43 1214 aa13.42□□□□□ -0.26
HMGA2-209ENST00000539662 SIL1Q9H173 461 aa13.42□□□□□ -0.26
HMGA2-209ENST00000539662 CNOT7Q9UIV1 285 aaKnown RBP13.42□□□□□ -0.26
HMGA2-209ENST00000539662 RCAN3Q9UKA8 241 aa13.42□□□□□ -0.26
HMGA2-209ENST00000539662 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.42□□□□□ -0.26
HMGA2-209ENST00000539662 G3V3G9 751 aa13.41□□□□□ -0.26
HMGA2-209ENST00000539662 VIL1P09327 827 aaKnown RBP13.41□□□□□ -0.26
HMGA2-209ENST00000539662 HSPA6P17066 643 aa13.41□□□□□ -0.26
HMGA2-209ENST00000539662 LMOD1P29536 600 aaPredicted RBP13.41□□□□□ -0.26
HMGA2-209ENST00000539662 DCAF8Q5TAQ9 597 aa13.41□□□□□ -0.26
HMGA2-209ENST00000539662 C20orf194Q5TEA3 1177 aa13.41□□□□□ -0.26
HMGA2-209ENST00000539662 MAP1SQ66K74 1059 aaPredicted RBP13.41□□□□□ -0.26
HMGA2-209ENST00000539662 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
HMGA2-209ENST00000539662 SAMD7Q7Z3H4 446 aa13.41□□□□□ -0.26
HMGA2-209ENST00000539662 MICALL2Q8IY33 904 aa13.41□□□□□ -0.26
HMGA2-209ENST00000539662 CD209Q9NNX6 404 aa13.41□□□□□ -0.26
HMGA2-209ENST00000539662 JAG2Q9Y219 1238 aa13.41□□□□□ -0.26
HMGA2-209ENST00000539662 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
HMGA2-209ENST00000539662 PNMA6EA0A0J9YXQ4 647 aa13.4□□□□□ -0.26
HMGA2-209ENST00000539662 EYA2O00167 538 aa13.4□□□□□ -0.26
HMGA2-209ENST00000539662 ZBTB7BO15156 539 aaPredicted RBP13.4□□□□□ -0.26
HMGA2-209ENST00000539662 GNAI3P08754 354 aa13.4□□□□□ -0.26
HMGA2-209ENST00000539662 GYG1P46976 350 aa13.4□□□□□ -0.26
HMGA2-209ENST00000539662 FSTL1Q12841 308 aa13.4□□□□□ -0.26
HMGA2-209ENST00000539662 METTL24Q5JXM2 366 aa13.4□□□□□ -0.26
HMGA2-209ENST00000539662 DACT2Q5SW24 774 aa13.4□□□□□ -0.26
HMGA2-209ENST00000539662 DLK2Q6UY11 383 aa13.4□□□□□ -0.26
HMGA2-209ENST00000539662 PODNQ7Z5L7 613 aa13.4□□□□□ -0.26
HMGA2-209ENST00000539662 LDHDQ86WU2 507 aa13.4□□□□□ -0.26
HMGA2-209ENST00000539662 ITPRIPQ8IWB1 547 aa13.4□□□□□ -0.26
HMGA2-209ENST00000539662 FTSJ3Q8IY81 847 aaKnown RBP13.4□□□□□ -0.26
HMGA2-209ENST00000539662 GMLQ99445 158 aa13.4□□□□□ -0.26
HMGA2-209ENST00000539662 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
HMGA2-209ENST00000539662 MROH5Q6ZUA9 1318 aa13.39□□□□□ -0.27
HMGA2-209ENST00000539662 USP17L3A6NCW0 530 aa13.39□□□□□ -0.27
HMGA2-209ENST00000539662 USP17L4A6NCW7 530 aa13.39□□□□□ -0.27
HMGA2-209ENST00000539662 ITGBL1O95965 494 aaPredicted RBP13.39□□□□□ -0.27
HMGA2-209ENST00000539662 RBM26Q5T8P6 1007 aaKnown RBP13.39□□□□□ -0.27
HMGA2-209ENST00000539662 RSBN1LQ6PCB5 846 aaPredicted RBP13.39□□□□□ -0.27
HMGA2-209ENST00000539662 C15orf52Q6ZUT6 534 aaKnown RBP13.39□□□□□ -0.27
HMGA2-209ENST00000539662 USP17L1Q7RTZ2 530 aa13.39□□□□□ -0.27
HMGA2-209ENST00000539662 FBXW7Q969H0 707 aa13.39□□□□□ -0.27
HMGA2-209ENST00000539662 COA1Q9GZY4 146 aa13.39□□□□□ -0.27
HMGA2-209ENST00000539662 SRGAP3O43295 1099 aa13.38□□□□□ -0.27
HMGA2-209ENST00000539662 PDE8BO95263 885 aa13.38□□□□□ -0.27
HMGA2-209ENST00000539662 GNAI2P04899 355 aa13.38□□□□□ -0.27
HMGA2-209ENST00000539662 GTF2IP78347 998 aa13.38□□□□□ -0.27
HMGA2-209ENST00000539662 MTX1Q13505 466 aa13.38□□□□□ -0.27
HMGA2-209ENST00000539662 TBC1D10BQ4KMP7 808 aaPredicted RBP13.38□□□□□ -0.27
HMGA2-209ENST00000539662 CERS5Q8N5B7 392 aa13.38□□□□□ -0.27
HMGA2-209ENST00000539662 DPF2Q92785 391 aa13.38□□□□□ -0.27
HMGA2-209ENST00000539662 FAM84BQ96KN1 310 aaPredicted RBP13.38□□□□□ -0.27
HMGA2-209ENST00000539662 ADARB2Q9NS39 739 aaKnown RBP13.38□□□□□ -0.27
HMGA2-209ENST00000539662 IQSEC3Q9UPP2 1182 aaPredicted RBP13.38□□□□□ -0.27
HMGA2-209ENST00000539662 IL1R1P14778 569 aa13.37□□□□□ -0.27
HMGA2-209ENST00000539662 FGFR2P21802 821 aa13.37□□□□□ -0.27
HMGA2-209ENST00000539662 UBE4AQ14139 1066 aa13.37□□□□□ -0.27
HMGA2-209ENST00000539662 USP50Q70EL3 339 aaPredicted RBP13.37□□□□□ -0.27
HMGA2-209ENST00000539662 PNMA8AQ86V59 439 aaPredicted RBP13.37□□□□□ -0.27
HMGA2-209ENST00000539662 COPRSQ9NQ92 184 aa13.37□□□□□ -0.27
HMGA2-209ENST00000539662 COG6Q9Y2V7 657 aa13.37□□□□□ -0.27
HMGA2-209ENST00000539662 POLR2AP24928 1970 aaKnown RBP13.37□□□□□ -0.27
HMGA2-209ENST00000539662 PASKQ96RG2 1323 aa13.37□□□□□ -0.27
HMGA2-209ENST00000539662 H7C1D1 291 aa13.36□□□□□ -0.27
HMGA2-209ENST00000539662 TRAF5O00463 557 aa13.36□□□□□ -0.27
HMGA2-209ENST00000539662 BCAMP50895 628 aa13.36□□□□□ -0.27
HMGA2-209ENST00000539662 TTLL5Q6EMB2 1281 aa13.36□□□□□ -0.27
HMGA2-209ENST00000539662 CNTROBQ8N137 903 aa13.36□□□□□ -0.27
HMGA2-209ENST00000539662 SCAF8Q9UPN6 1271 aaKnown RBP13.36□□□□□ -0.27
HMGA2-209ENST00000539662 PCDHAC2Q9Y5I4 1007 aa13.36□□□□□ -0.27
HMGA2-209ENST00000539662 RPS12P25398 132 aaKnown RBP13.35□□□□□ -0.27
HMGA2-209ENST00000539662 ZNF280AP59817 542 aaPredicted RBP13.35□□□□□ -0.27
HMGA2-209ENST00000539662 GRIK5Q16478 980 aa13.35□□□□□ -0.27
HMGA2-209ENST00000539662 STRIP1Q5VSL9 837 aa13.35□□□□□ -0.27
HMGA2-209ENST00000539662 FBXO33Q7Z6M2 555 aa13.35□□□□□ -0.27
HMGA2-209ENST00000539662 AGBL3Q8NEM8 1001 aa13.35□□□□□ -0.27
HMGA2-209ENST00000539662 TDRD7Q8NHU6 1098 aaKnown RBP13.35□□□□□ -0.27
HMGA2-209ENST00000539662 GLIS2Q9BZE0 524 aaPredicted RBP13.35□□□□□ -0.27
HMGA2-209ENST00000539662 ZNF609O15014 1411 aa13.35□□□□□ -0.27
HMGA2-209ENST00000539662 CIAO1O76071 339 aa13.34□□□□□ -0.27
HMGA2-209ENST00000539662 USP17L8P0C7I0 530 aa13.34□□□□□ -0.27
HMGA2-209ENST00000539662 ADORA1P30542 326 aa13.34□□□□□ -0.27
HMGA2-209ENST00000539662 HIBADHP31937 336 aaKnown RBP13.34□□□□□ -0.27
HMGA2-209ENST00000539662 APLP1P51693 650 aa13.34□□□□□ -0.27
HMGA2-209ENST00000539662 ATP8B2P98198 1209 aa13.34□□□□□ -0.27
HMGA2-209ENST00000539662 TFCP2Q12800 502 aa13.34□□□□□ -0.27
HMGA2-209ENST00000539662 POLA2Q14181 598 aa13.34□□□□□ -0.27
HMGA2-209ENST00000539662 MVPQ14764 893 aaKnown RBP13.34□□□□□ -0.27
HMGA2-209ENST00000539662 ZNF804AQ7Z570 1209 aa13.34□□□□□ -0.27
HMGA2-209ENST00000539662 KIAA0825Q8IV33 1275 aa13.34□□□□□ -0.27
HMGA2-209ENST00000539662 DNAJC5GQ8N7S2 189 aa13.34□□□□□ -0.27
HMGA2-209ENST00000539662 PGAP2Q9UHJ9 254 aa13.34□□□□□ -0.27
HMGA2-209ENST00000539662 AOX1Q06278 1338 aa13.34□□□□□ -0.27
HMGA2-209ENST00000539662 F8W031 263 aaPredicted RBP13.33□□□□□ -0.28
HMGA2-209ENST00000539662 IL15P40933 162 aaPredicted RBP13.33□□□□□ -0.28
HMGA2-209ENST00000539662 TIMM10P62072 90 aa13.33□□□□□ -0.28
HMGA2-209ENST00000539662 PUM3Q15397 648 aaKnown RBP13.33□□□□□ -0.28
HMGA2-209ENST00000539662 KIF4BQ2VIQ3 1234 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 186.3 ms