RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 GYS1P13807 737 aa20.5■□□□□ 0.87
PCDHB17P-201ENST00000539533 SLFNL1Q499Z3 407 aa20.5■□□□□ 0.87
PCDHB17P-201ENST00000539533 ZNF589Q86UQ0 364 aaPredicted RBP20.5■□□□□ 0.87
PCDHB17P-201ENST00000539533 LPIN2Q92539 896 aa20.5■□□□□ 0.87
PCDHB17P-201ENST00000539533 PI16Q6UXB8 463 aa20.49■□□□□ 0.87
PCDHB17P-201ENST00000539533 NPHP1O15259 732 aa20.49■□□□□ 0.87
PCDHB17P-201ENST00000539533 ANAPC15P60006 121 aa20.49■□□□□ 0.87
PCDHB17P-201ENST00000539533 ANKRD18AQ8IVF6 992 aa20.49■□□□□ 0.87
PCDHB17P-201ENST00000539533 SEC62Q99442 399 aaKnown RBP20.49■□□□□ 0.87
PCDHB17P-201ENST00000539533 ESPNB1AK53 854 aa20.48■□□□□ 0.87
PCDHB17P-201ENST00000539533 CHRNDQ07001 517 aa20.48■□□□□ 0.87
PCDHB17P-201ENST00000539533 CELF1Q92879 486 aaKnown RBP20.48■□□□□ 0.87
PCDHB17P-201ENST00000539533 CARMIL3Q8ND23 1372 aa20.48■□□□□ 0.87
PCDHB17P-201ENST00000539533 CCDC171Q6TFL3 1326 aa20.48■□□□□ 0.87
PCDHB17P-201ENST00000539533 ZAP70P43403 619 aa20.48■□□□□ 0.87
PCDHB17P-201ENST00000539533 MED23Q9ULK4 1368 aa20.47■□□□□ 0.87
PCDHB17P-201ENST00000539533 MCAMP43121 646 aa20.47■□□□□ 0.87
PCDHB17P-201ENST00000539533 PHKA1P46020 1223 aa20.47■□□□□ 0.87
PCDHB17P-201ENST00000539533 ZNF827Q17R98 1081 aa20.47■□□□□ 0.87
PCDHB17P-201ENST00000539533 CCDC102BQ68D86 513 aa20.47■□□□□ 0.87
PCDHB17P-201ENST00000539533 RASEFQ8IZ41 740 aa20.47■□□□□ 0.87
PCDHB17P-201ENST00000539533 RFX7Q2KHR2 1363 aa20.47■□□□□ 0.87
PCDHB17P-201ENST00000539533 FBXO41Q8TF61 875 aa20.46■□□□□ 0.87
PCDHB17P-201ENST00000539533 NEK4P51957 841 aa20.46■□□□□ 0.87
PCDHB17P-201ENST00000539533 CCDC129Q6ZRS4 1044 aa20.46■□□□□ 0.87
PCDHB17P-201ENST00000539533 SNX14Q9Y5W7 946 aa20.46■□□□□ 0.87
PCDHB17P-201ENST00000539533 SLC5A1P13866 664 aa20.45■□□□□ 0.86
PCDHB17P-201ENST00000539533 CLEC17AQ6ZS10 378 aa20.45■□□□□ 0.86
PCDHB17P-201ENST00000539533 MAP4K1Q92918 833 aa20.45■□□□□ 0.86
PCDHB17P-201ENST00000539533 IL17RAQ96F46 866 aa20.45■□□□□ 0.86
PCDHB17P-201ENST00000539533 BSDC1Q9NW68 430 aaPredicted RBP20.45■□□□□ 0.86
PCDHB17P-201ENST00000539533 TFCP2L1Q9NZI6 479 aa20.45■□□□□ 0.86
PCDHB17P-201ENST00000539533 ST18O60284 1047 aa20.45■□□□□ 0.86
PCDHB17P-201ENST00000539533 PRPF40BQ6NWY9 871 aaKnown RBP20.45■□□□□ 0.86
PCDHB17P-201ENST00000539533 CNBD1Q8NA66 436 aa20.45■□□□□ 0.86
PCDHB17P-201ENST00000539533 TRIM44Q96DX7 344 aaPredicted RBP20.45■□□□□ 0.86
PCDHB17P-201ENST00000539533 WTIPA6NIX2 430 aaPredicted RBP20.44■□□□□ 0.86
PCDHB17P-201ENST00000539533 GOLGA6L22H0YM25 854 aa20.44■□□□□ 0.86
PCDHB17P-201ENST00000539533 MCMDC2Q4G0Z9 681 aa20.44■□□□□ 0.86
PCDHB17P-201ENST00000539533 ZNF512BQ96KM6 892 aaPredicted RBP20.44■□□□□ 0.86
PCDHB17P-201ENST00000539533 RBM8AQ9Y5S9 174 aaKnown RBP20.44■□□□□ 0.86
PCDHB17P-201ENST00000539533 TM4SF1P30408 202 aa20.44■□□□□ 0.86
PCDHB17P-201ENST00000539533 NECTIN1Q15223 517 aa20.44■□□□□ 0.86
PCDHB17P-201ENST00000539533 UPF3BQ9BZI7 483 aaKnown RBP20.44■□□□□ 0.86
PCDHB17P-201ENST00000539533 RPS8P62241 208 aaKnown RBP20.43■□□□□ 0.86
PCDHB17P-201ENST00000539533 PRR5LQ6MZQ0 368 aa20.43■□□□□ 0.86
PCDHB17P-201ENST00000539533 MINPP1Q9UNW1 487 aa20.43■□□□□ 0.86
PCDHB17P-201ENST00000539533 AKAP11Q9UKA4 1901 aa20.43■□□□□ 0.86
PCDHB17P-201ENST00000539533 RNF113AO15541 343 aaKnown RBP20.43■□□□□ 0.86
PCDHB17P-201ENST00000539533 AKT1S1Q96B36 256 aa20.43■□□□□ 0.86
PCDHB17P-201ENST00000539533 TNRC6CQ9HCJ0 1690 aaKnown RBP20.42■□□□□ 0.86
PCDHB17P-201ENST00000539533 ARID4AP29374 1257 aaPredicted RBP20.42■□□□□ 0.86
PCDHB17P-201ENST00000539533 KCNJ4P48050 445 aa20.42■□□□□ 0.86
PCDHB17P-201ENST00000539533 BAG4O95429 457 aaKnown RBP20.42■□□□□ 0.86
PCDHB17P-201ENST00000539533 SERPINB2P05120 415 aa20.42■□□□□ 0.86
PCDHB17P-201ENST00000539533 CYP2E1P05181 493 aaPredicted RBP20.42■□□□□ 0.86
PCDHB17P-201ENST00000539533 BCAMP50895 628 aa20.42■□□□□ 0.86
PCDHB17P-201ENST00000539533 ZMYM1Q5SVZ6 1142 aa20.42■□□□□ 0.86
PCDHB17P-201ENST00000539533 ARAP2Q8WZ64 1704 aa20.41■□□□□ 0.86
PCDHB17P-201ENST00000539533 UQCRFS1P1P0C7P4 283 aa20.41■□□□□ 0.86
PCDHB17P-201ENST00000539533 HMGB2P26583 209 aaKnown RBP20.41■□□□□ 0.86
PCDHB17P-201ENST00000539533 KLHL40Q2TBA0 621 aa20.41■□□□□ 0.86
PCDHB17P-201ENST00000539533 COL23A1Q86Y22 540 aaPredicted RBP20.41■□□□□ 0.86
PCDHB17P-201ENST00000539533 HELLSQ9NRZ9 838 aa20.41■□□□□ 0.86
PCDHB17P-201ENST00000539533 DDR1Q08345 913 aa20.4■□□□□ 0.86
PCDHB17P-201ENST00000539533 CREB3L3Q68CJ9 461 aa20.4■□□□□ 0.86
PCDHB17P-201ENST00000539533 TICAM2Q86XR7 235 aa20.4■□□□□ 0.86
PCDHB17P-201ENST00000539533 KCNB2Q92953 911 aa20.4■□□□□ 0.86
PCDHB17P-201ENST00000539533 HMG20BQ9P0W2 317 aa20.4■□□□□ 0.86
PCDHB17P-201ENST00000539533 ADCK5Q3MIX3 580 aa20.39■□□□□ 0.85
PCDHB17P-201ENST00000539533 PIH1D3Q9NQM4 214 aaKnown RBP20.39■□□□□ 0.85
PCDHB17P-201ENST00000539533 DDX49Q9Y6V7 483 aaKnown RBP20.39■□□□□ 0.85
PCDHB17P-201ENST00000539533 SLC27A2O14975 620 aa20.38■□□□□ 0.85
PCDHB17P-201ENST00000539533 RASGRF1Q13972 1273 aa20.38■□□□□ 0.85
PCDHB17P-201ENST00000539533 OSBP2Q969R2 916 aa20.38■□□□□ 0.85
PCDHB17P-201ENST00000539533 TNS1Q9HBL0 1735 aaKnown RBP20.38■□□□□ 0.85
PCDHB17P-201ENST00000539533 MAST3O60307 1309 aa20.38■□□□□ 0.85
PCDHB17P-201ENST00000539533 M0R2C6 588 aa20.38■□□□□ 0.85
PCDHB17P-201ENST00000539533 VPS53Q5VIR6 699 aa20.38■□□□□ 0.85
PCDHB17P-201ENST00000539533 SPATA5Q8NB90 893 aa20.38■□□□□ 0.85
PCDHB17P-201ENST00000539533 POLRMTO00411 1230 aaKnown RBP20.37■□□□□ 0.85
PCDHB17P-201ENST00000539533 CPA1P15085 419 aa20.37■□□□□ 0.85
PCDHB17P-201ENST00000539533 UBE4AQ14139 1066 aa20.37■□□□□ 0.85
PCDHB17P-201ENST00000539533 TAF6LQ9Y6J9 622 aa20.37■□□□□ 0.85
PCDHB17P-201ENST00000539533 A0A1B0GUL6 1792 aa20.37■□□□□ 0.85
PCDHB17P-201ENST00000539533 GYG1P46976 350 aa20.37■□□□□ 0.85
PCDHB17P-201ENST00000539533 CCDC173Q0VFZ6 552 aa20.37■□□□□ 0.85
PCDHB17P-201ENST00000539533 WASHC4Q2M389 1173 aa20.37■□□□□ 0.85
PCDHB17P-201ENST00000539533 NOL8Q76FK4 1167 aaKnown RBP20.37■□□□□ 0.85
PCDHB17P-201ENST00000539533 SLC51AQ86UW1 340 aa20.37■□□□□ 0.85
PCDHB17P-201ENST00000539533 ZKSCAN1P17029 563 aaPredicted RBP20.36■□□□□ 0.85
PCDHB17P-201ENST00000539533 CASTP20810 708 aaKnown RBP20.36■□□□□ 0.85
PCDHB17P-201ENST00000539533 NASPP49321 788 aaPredicted RBP20.36■□□□□ 0.85
PCDHB17P-201ENST00000539533 ST5P78524 1137 aa20.36■□□□□ 0.85
PCDHB17P-201ENST00000539533 LRRFIP1Q32MZ4 808 aaKnown RBP20.36■□□□□ 0.85
PCDHB17P-201ENST00000539533 IDH1O75874 414 aaKnown RBP20.36■□□□□ 0.85
PCDHB17P-201ENST00000539533 ZFYP08048 801 aaPredicted RBP20.36■□□□□ 0.85
PCDHB17P-201ENST00000539533 NUCB2P80303 420 aa20.36■□□□□ 0.85
PCDHB17P-201ENST00000539533 TTF1Q15361 905 aaPredicted RBP20.36■□□□□ 0.85
PCDHB17P-201ENST00000539533 JAKMIP1Q96N16 626 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms