RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 SMARCC2Q8TAQ2 1214 aa21.21■□□□□ 0.99
GNE-204ENST00000539208 TRMT112Q9UI30 125 aaKnown RBP21.21■□□□□ 0.99
GNE-204ENST00000539208 CTNNA3Q9UI47 895 aa21.21■□□□□ 0.99
GNE-204ENST00000539208 HSP90B1P14625 803 aaKnown RBP21.2■□□□□ 0.98
GNE-204ENST00000539208 DZIP3Q86Y13 1208 aaKnown RBP21.2■□□□□ 0.98
GNE-204ENST00000539208 DOT1LQ8TEK3 1739 aa21.2■□□□□ 0.98
GNE-204ENST00000539208 VGLL2Q8N8G2 317 aa21.2■□□□□ 0.98
GNE-204ENST00000539208 SYTL4Q96C24 671 aaPredicted RBP21.2■□□□□ 0.98
GNE-204ENST00000539208 SCAND2PQ9GZW5 306 aaPredicted RBP21.2■□□□□ 0.98
GNE-204ENST00000539208 ZAP70P43403 619 aa21.19■□□□□ 0.98
GNE-204ENST00000539208 FGD1P98174 961 aa21.19■□□□□ 0.98
GNE-204ENST00000539208 SCRN1Q12765 414 aa21.19■□□□□ 0.98
GNE-204ENST00000539208 SCARF1Q14162 830 aa21.19■□□□□ 0.98
GNE-204ENST00000539208 UVSSAQ2YD98 709 aa21.19■□□□□ 0.98
GNE-204ENST00000539208 ZSCAN30Q86W11 494 aa21.19■□□□□ 0.98
GNE-204ENST00000539208 APPBP2Q92624 585 aa21.19■□□□□ 0.98
GNE-204ENST00000539208 CHMP4CQ96CF2 233 aa21.19■□□□□ 0.98
GNE-204ENST00000539208 JAK2O60674 1132 aa21.18■□□□□ 0.98
GNE-204ENST00000539208 TTC6Q86TZ1 520 aa21.18■□□□□ 0.98
GNE-204ENST00000539208 FERMT3Q86UX7 667 aa21.18■□□□□ 0.98
GNE-204ENST00000539208 CNNM1Q9NRU3 951 aa21.18■□□□□ 0.98
GNE-204ENST00000539208 SPATA31A1Q5TZJ5 1347 aa21.18■□□□□ 0.98
GNE-204ENST00000539208 EIF5P55010 431 aaKnown RBP21.17■□□□□ 0.98
GNE-204ENST00000539208 ZNF274Q96GC6 653 aaPredicted RBP21.17■□□□□ 0.98
GNE-204ENST00000539208 UBN2Q6ZU65 1347 aa21.17■□□□□ 0.98
GNE-204ENST00000539208 LRRC2Q9BYS8 371 aa21.17■□□□□ 0.98
GNE-204ENST00000539208 ZSCAN16Q9H4T2 348 aaPredicted RBP21.17■□□□□ 0.98
GNE-204ENST00000539208 TBC1D2BQ9UPU7 963 aa21.17■□□□□ 0.98
GNE-204ENST00000539208 NRAPQ86VF7 1730 aa21.17■□□□□ 0.98
GNE-204ENST00000539208 LRP5O75197 1615 aa21.16■□□□□ 0.98
GNE-204ENST00000539208 FOXP2O15409 715 aa21.16■□□□□ 0.98
GNE-204ENST00000539208 PDE8BO95263 885 aa21.16■□□□□ 0.98
GNE-204ENST00000539208 EVCP57679 992 aa21.16■□□□□ 0.98
GNE-204ENST00000539208 HMGN5P82970 282 aaKnown RBP21.16■□□□□ 0.98
GNE-204ENST00000539208 WASHC4Q2M389 1173 aa21.16■□□□□ 0.98
GNE-204ENST00000539208 ZSCAN25Q6NSZ9 544 aa21.16■□□□□ 0.98
GNE-204ENST00000539208 RNF214Q8ND24 703 aa21.16■□□□□ 0.98
GNE-204ENST00000539208 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.16■□□□□ 0.98
GNE-204ENST00000539208 MYH7P12883 1935 aa21.16■□□□□ 0.98
GNE-204ENST00000539208 AKAP11Q9UKA4 1901 aa21.16■□□□□ 0.98
GNE-204ENST00000539208 TTF1Q15361 905 aaPredicted RBP21.16■□□□□ 0.98
GNE-204ENST00000539208 CICQ96RK0 1608 aaPredicted RBP21.15■□□□□ 0.98
GNE-204ENST00000539208 A0A0G2JLW4 131 aa21.15■□□□□ 0.98
GNE-204ENST00000539208 MCAMP43121 646 aa21.15■□□□□ 0.98
GNE-204ENST00000539208 DDB1Q16531 1140 aa21.15■□□□□ 0.98
GNE-204ENST00000539208 IMMTQ16891 758 aaKnown RBP21.15■□□□□ 0.98
GNE-204ENST00000539208 NSUN7Q8NE18 718 aaKnown RBP21.15■□□□□ 0.98
GNE-204ENST00000539208 KIF3AQ9Y496 699 aa21.15■□□□□ 0.98
GNE-204ENST00000539208 NWD2Q9ULI1 1742 aa21.15■□□□□ 0.98
GNE-204ENST00000539208 RREB1Q92766 1687 aa21.15■□□□□ 0.98
GNE-204ENST00000539208 APOBRQ0VD83 1088 aa21.14■□□□□ 0.98
GNE-204ENST00000539208 RESTQ13127 1097 aa21.14■□□□□ 0.98
GNE-204ENST00000539208 INTS5Q6P9B9 1019 aaKnown RBP21.14■□□□□ 0.98
GNE-204ENST00000539208 FUCA2Q9BTY2 467 aa21.14■□□□□ 0.98
GNE-204ENST00000539208 CCDC87Q9NVE4 849 aa21.14■□□□□ 0.98
GNE-204ENST00000539208 TTLL5Q6EMB2 1281 aa21.14■□□□□ 0.97
GNE-204ENST00000539208 NAA16Q6N069 864 aaPredicted RBP21.14■□□□□ 0.97
GNE-204ENST00000539208 MROH5Q6ZUA9 1318 aa21.14■□□□□ 0.97
GNE-204ENST00000539208 FGAP02671 866 aa21.13■□□□□ 0.97
GNE-204ENST00000539208 PUS7LQ9H0K6 701 aaKnown RBP21.13■□□□□ 0.97
GNE-204ENST00000539208 ATRNO75882 1429 aa21.13■□□□□ 0.97
GNE-204ENST00000539208 H3BQV1 296 aa21.13■□□□□ 0.97
GNE-204ENST00000539208 CTDNEP1O95476 244 aa21.13■□□□□ 0.97
GNE-204ENST00000539208 ARID4AP29374 1257 aaPredicted RBP21.13■□□□□ 0.97
GNE-204ENST00000539208 PDIA3P30101 505 aaKnown RBP21.13■□□□□ 0.97
GNE-204ENST00000539208 IFFO2Q5TF58 517 aa21.13■□□□□ 0.97
GNE-204ENST00000539208 FAM173BQ6P4H8 233 aa21.13■□□□□ 0.97
GNE-204ENST00000539208 LEO1Q8WVC0 666 aaPredicted RBP21.13■□□□□ 0.97
GNE-204ENST00000539208 SPATA32Q96LK8 384 aa21.13■□□□□ 0.97
GNE-204ENST00000539208 NOL7Q9UMY1 257 aaKnown RBP21.13■□□□□ 0.97
GNE-204ENST00000539208 KAT6BQ8WYB5 2073 aa21.13■□□□□ 0.97
GNE-204ENST00000539208 UQCRFS1P1P0C7P4 283 aa21.12■□□□□ 0.97
GNE-204ENST00000539208 ADD2P35612 726 aa21.12■□□□□ 0.97
GNE-204ENST00000539208 PI16Q6UXB8 463 aa21.12■□□□□ 0.97
GNE-204ENST00000539208 SALL1Q9NSC2 1324 aa21.12■□□□□ 0.97
GNE-204ENST00000539208 SLIT2O94813 1529 aa21.12■□□□□ 0.97
GNE-204ENST00000539208 FGFR2P21802 821 aa21.12■□□□□ 0.97
GNE-204ENST00000539208 PUM3Q15397 648 aaKnown RBP21.12■□□□□ 0.97
GNE-204ENST00000539208 LPIN2Q92539 896 aa21.12■□□□□ 0.97
GNE-204ENST00000539208 ARAP2Q8WZ64 1704 aa21.11■□□□□ 0.97
GNE-204ENST00000539208 WDR19Q8NEZ3 1342 aa21.11■□□□□ 0.97
GNE-204ENST00000539208 GPAA1O43292 621 aa21.11■□□□□ 0.97
GNE-204ENST00000539208 UBE3CQ15386 1083 aa21.11■□□□□ 0.97
GNE-204ENST00000539208 DDX11Q96FC9 970 aa21.11■□□□□ 0.97
GNE-204ENST00000539208 PTPDC1A2A3K4 754 aa21.1■□□□□ 0.97
GNE-204ENST00000539208 CRKLP46109 303 aaKnown RBP21.1■□□□□ 0.97
GNE-204ENST00000539208 PARP10Q53GL7 1025 aa21.1■□□□□ 0.97
GNE-204ENST00000539208 CCDC102BQ68D86 513 aa21.1■□□□□ 0.97
GNE-204ENST00000539208 CCDC39Q9UFE4 941 aa21.1■□□□□ 0.97
GNE-204ENST00000539208 CFAP45Q9UL16 551 aa21.1■□□□□ 0.97
GNE-204ENST00000539208 ATP6V1AP38606 617 aa21.1■□□□□ 0.97
GNE-204ENST00000539208 SUSD4Q5VX71 490 aa21.1■□□□□ 0.97
GNE-204ENST00000539208 MARCH10Q8NA82 808 aaPredicted RBP21.1■□□□□ 0.97
GNE-204ENST00000539208 TFIP11Q9UBB9 837 aaKnown RBP21.1■□□□□ 0.97
GNE-204ENST00000539208 MSNP26038 577 aaKnown RBP21.09■□□□□ 0.97
GNE-204ENST00000539208 MCM5P33992 734 aa21.09■□□□□ 0.97
GNE-204ENST00000539208 GIMAP6Q6P9H5 292 aa21.09■□□□□ 0.97
GNE-204ENST00000539208 MB21D2Q8IYB1 491 aaPredicted RBP21.09■□□□□ 0.97
GNE-204ENST00000539208 UTP14AQ9BVJ6 771 aaKnown RBP21.09■□□□□ 0.97
GNE-204ENST00000539208 SPATA31A5Q5VU36 1347 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms