RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 CAVIN4Q5BKX8 364 aa12.31□□□□□ -0.44
LDHA-216ENST00000538451 TTC22Q5TAA0 569 aa12.31□□□□□ -0.44
LDHA-216ENST00000538451 STYK1Q6J9G0 422 aa12.31□□□□□ -0.44
LDHA-216ENST00000538451 C16orf71Q8IYS4 520 aaPredicted RBP12.31□□□□□ -0.44
LDHA-216ENST00000538451 CNTROBQ8N137 903 aa12.31□□□□□ -0.44
LDHA-216ENST00000538451 CNKSR1Q969H4 720 aa12.31□□□□□ -0.44
LDHA-216ENST00000538451 EAF2Q96CJ1 260 aaPredicted RBP12.31□□□□□ -0.44
LDHA-216ENST00000538451 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
LDHA-216ENST00000538451 NRXN2Q9P2S2 1712 aa12.3□□□□□ -0.44
LDHA-216ENST00000538451 TRIM6-TRIM34B2RNG4 842 aa12.3□□□□□ -0.44
LDHA-216ENST00000538451 SRGNP10124 158 aa12.3□□□□□ -0.44
LDHA-216ENST00000538451 YBX3P16989 372 aaKnown RBP eCLIP12.3□□□□□ -0.44
LDHA-216ENST00000538451 CHRNDQ07001 517 aa12.3□□□□□ -0.44
LDHA-216ENST00000538451 GRIPAP1Q4V328 841 aa12.3□□□□□ -0.44
LDHA-216ENST00000538451 TTC39AQ5SRH9 613 aa12.3□□□□□ -0.44
LDHA-216ENST00000538451 C2CD5Q86YS7 1000 aa12.3□□□□□ -0.44
LDHA-216ENST00000538451 ZNF622Q969S3 477 aaKnown RBP eCLIP12.3□□□□□ -0.44
LDHA-216ENST00000538451 GNL3LQ9NVN8 582 aaKnown RBP12.3□□□□□ -0.44
LDHA-216ENST00000538451 ANKIB1Q9P2G1 1089 aa12.3□□□□□ -0.44
LDHA-216ENST00000538451 MINPP1Q9UNW1 487 aa12.3□□□□□ -0.44
LDHA-216ENST00000538451 UQCRFS1P1P0C7P4 283 aa12.29□□□□□ -0.44
LDHA-216ENST00000538451 C3orf67Q6ZVT6 689 aa12.29□□□□□ -0.44
LDHA-216ENST00000538451 TICAM2Q86XR7 235 aa12.29□□□□□ -0.44
LDHA-216ENST00000538451 VPS37DQ86XT2 251 aa12.29□□□□□ -0.44
LDHA-216ENST00000538451 CELF1Q92879 486 aaKnown RBP12.29□□□□□ -0.44
LDHA-216ENST00000538451 UPF2Q9HAU5 1272 aaKnown RBP12.29□□□□□ -0.44
LDHA-216ENST00000538451 LEMD3Q9Y2U8 911 aa12.29□□□□□ -0.44
LDHA-216ENST00000538451 HIP1O00291 1037 aa12.28□□□□□ -0.44
LDHA-216ENST00000538451 PPEF1O14829 653 aaPredicted RBP12.28□□□□□ -0.44
LDHA-216ENST00000538451 ATP5JP18859 108 aa12.28□□□□□ -0.44
LDHA-216ENST00000538451 TIMM10P62072 90 aa12.28□□□□□ -0.44
LDHA-216ENST00000538451 EVX2Q03828 476 aa12.28□□□□□ -0.44
LDHA-216ENST00000538451 CC2D2BQ6DHV5 1058 aa12.28□□□□□ -0.44
LDHA-216ENST00000538451 SP8Q8IXZ3 490 aa12.28□□□□□ -0.44
LDHA-216ENST00000538451 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.28□□□□□ -0.44
LDHA-216ENST00000538451 XDHP47989 1333 aa12.28□□□□□ -0.44
LDHA-216ENST00000538451 ZNF609O15014 1411 aa12.28□□□□□ -0.44
LDHA-216ENST00000538451 KIF13BQ9NQT8 1826 aa12.28□□□□□ -0.44
LDHA-216ENST00000538451 A0A0G2JLW4 131 aa12.27□□□□□ -0.45
LDHA-216ENST00000538451 ATP2B4P23634 1241 aa12.27□□□□□ -0.45
LDHA-216ENST00000538451 VGLL2Q8N8G2 317 aa12.27□□□□□ -0.45
LDHA-216ENST00000538451 RILPL2Q969X0 211 aa12.27□□□□□ -0.45
LDHA-216ENST00000538451 EVI5LQ96CN4 794 aa12.27□□□□□ -0.45
LDHA-216ENST00000538451 XAGE2Q96GT9 111 aa12.27□□□□□ -0.45
LDHA-216ENST00000538451 DBNDD2Q9BQY9 259 aa12.27□□□□□ -0.45
LDHA-216ENST00000538451 SALL3Q9BXA9 1300 aa12.27□□□□□ -0.45
LDHA-216ENST00000538451 DBNLQ9UJU6 430 aaKnown RBP12.27□□□□□ -0.45
LDHA-216ENST00000538451 CDC45O75419 566 aa12.26□□□□□ -0.45
LDHA-216ENST00000538451 TAF5LO75529 589 aa12.26□□□□□ -0.45
LDHA-216ENST00000538451 DPEP1P16444 411 aa12.26□□□□□ -0.45
LDHA-216ENST00000538451 NUBP1P53384 320 aa12.26□□□□□ -0.45
LDHA-216ENST00000538451 GSE1Q14687 1217 aa12.26□□□□□ -0.45
LDHA-216ENST00000538451 TTF1Q15361 905 aaPredicted RBP12.26□□□□□ -0.45
LDHA-216ENST00000538451 SOGA3Q5TF21 947 aa12.26□□□□□ -0.45
LDHA-216ENST00000538451 HELBQ8NG08 1087 aaPredicted RBP12.26□□□□□ -0.45
LDHA-216ENST00000538451 OTUD7AQ8TE49 926 aaPredicted RBP12.26□□□□□ -0.45
LDHA-216ENST00000538451 ZNF512BQ96KM6 892 aaPredicted RBP12.26□□□□□ -0.45
LDHA-216ENST00000538451 WWC3Q9ULE0 1092 aa12.26□□□□□ -0.45
LDHA-216ENST00000538451 NSFL1CQ9UNZ2 370 aaKnown RBP12.26□□□□□ -0.45
LDHA-216ENST00000538451 ATP6V0A2Q9Y487 856 aa12.26□□□□□ -0.45
LDHA-216ENST00000538451 UTRNP46939 3433 aa12.25□□□□□ -0.45
LDHA-216ENST00000538451 ZNF804BA4D1E1 1349 aa12.25□□□□□ -0.45
LDHA-216ENST00000538451 GTPBP6O43824 516 aaPredicted RBP12.25□□□□□ -0.45
LDHA-216ENST00000538451 FRAT2O75474 233 aaPredicted RBP12.25□□□□□ -0.45
LDHA-216ENST00000538451 FGFR2P21802 821 aa12.25□□□□□ -0.45
LDHA-216ENST00000538451 SKAP1Q86WV1 359 aa12.25□□□□□ -0.45
LDHA-216ENST00000538451 PI4K2BQ8TCG2 481 aa12.25□□□□□ -0.45
LDHA-216ENST00000538451 RUFY2Q8WXA3 655 aa12.25□□□□□ -0.45
LDHA-216ENST00000538451 EYA3Q99504 573 aa12.25□□□□□ -0.45
LDHA-216ENST00000538451 BOLA2Q9H3K6 86 aa12.25□□□□□ -0.45
LDHA-216ENST00000538451 PIM2Q9P1W9 311 aa12.25□□□□□ -0.45
LDHA-216ENST00000538451 GGA1Q9UJY5 639 aa12.25□□□□□ -0.45
LDHA-216ENST00000538451 BCS1LQ9Y276 419 aa12.25□□□□□ -0.45
LDHA-216ENST00000538451 TNRC6CQ9HCJ0 1690 aaKnown RBP12.25□□□□□ -0.45
LDHA-216ENST00000538451 CHD4Q14839 1912 aa12.24□□□□□ -0.45
LDHA-216ENST00000538451 SEMA3EO15041 775 aa12.24□□□□□ -0.45
LDHA-216ENST00000538451 SDSP20132 328 aa12.24□□□□□ -0.45
LDHA-216ENST00000538451 ZSCAN25Q6NSZ9 544 aa12.24□□□□□ -0.45
LDHA-216ENST00000538451 ZNF804AQ7Z570 1209 aa12.24□□□□□ -0.45
LDHA-216ENST00000538451 MPNDQ8N594 471 aa12.24□□□□□ -0.45
LDHA-216ENST00000538451 TTLL6Q8N841 843 aa12.24□□□□□ -0.45
LDHA-216ENST00000538451 SUPT20HQ8NEM7 779 aa12.24□□□□□ -0.45
LDHA-216ENST00000538451 HAUS7Q99871 368 aa12.24□□□□□ -0.45
LDHA-216ENST00000538451 PODXL2Q9NZ53 605 aa12.24□□□□□ -0.45
LDHA-216ENST00000538451 G3V3G9 751 aa12.23□□□□□ -0.45
LDHA-216ENST00000538451 C6orf229H3BNL8 230 aa12.23□□□□□ -0.45
LDHA-216ENST00000538451 IGSF3O75054 1194 aa12.23□□□□□ -0.45
LDHA-216ENST00000538451 GSPT1P15170 499 aaKnown RBP12.23□□□□□ -0.45
LDHA-216ENST00000538451 DCAF8Q5TAQ9 597 aa12.23□□□□□ -0.45
LDHA-216ENST00000538451 CCDC102BQ68D86 513 aa12.23□□□□□ -0.45
LDHA-216ENST00000538451 DPP8Q6V1X1 898 aaPredicted RBP12.23□□□□□ -0.45
LDHA-216ENST00000538451 DNAJC2Q99543 621 aaKnown RBP12.23□□□□□ -0.45
LDHA-216ENST00000538451 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.23□□□□□ -0.45
LDHA-216ENST00000538451 DIAPH3Q9NSV4 1193 aa12.23□□□□□ -0.45
LDHA-216ENST00000538451 TLR7Q9NYK1 1049 aaKnown RBP12.23□□□□□ -0.45
LDHA-216ENST00000538451 RIOK3O14730 519 aaKnown RBP12.22□□□□□ -0.45
LDHA-216ENST00000538451 UFL1O94874 794 aa12.22□□□□□ -0.45
LDHA-216ENST00000538451 KCNA3P22001 575 aa12.22□□□□□ -0.45
LDHA-216ENST00000538451 ARID4AP29374 1257 aaPredicted RBP12.22□□□□□ -0.45
LDHA-216ENST00000538451 HIBADHP31937 336 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms