RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 JCADQ9P266 1359 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 SYT1P21579 422 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 EVI5LQ96CN4 794 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 CCDC87Q9NVE4 849 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 DACT1Q9NYF0 836 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 LRP2BPQ9P2M1 347 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 IDH1O75874 414 aaKnown RBP13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 SLC5A1P13866 664 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 POLKQ9UBT6 870 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 HDAC9Q9UKV0 1011 aa13.81□□□□□ -0.2
AMBRA1-212ENST00000534300 NOP2P46087 812 aaKnown RBP13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 RBM6P78332 1123 aaKnown RBP13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 ATP2B2Q01814 1243 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 CCDC85AQ96PX6 553 aaPredicted RBP13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 PTPRMP28827 1452 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 CTNNBL1Q8WYA6 563 aaPredicted RBP13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 NIP7Q9Y221 180 aaKnown RBP eCLIP13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 CEP83Q9Y592 693 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 KAT6BQ8WYB5 2073 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 A0A1W2PP64 1363 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 NUCB1Q02818 461 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 KIAA0753Q2KHM9 967 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 DZIP3Q86Y13 1208 aaKnown RBP13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 ZNF287Q9HBT7 754 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 ECHDC1Q9NTX5 307 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 CNPY2Q9Y2B0 182 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 GOLGA8BA8MQT2 603 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 SYKP43405 635 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 TYRO3Q06418 890 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 KCNG4Q8TDN1 519 aa13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 THUMPD2Q9BTF0 503 aaKnown RBP13.8□□□□□ -0.2
AMBRA1-212ENST00000534300 KIF5BP33176 963 aa13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 HDXQ7Z353 690 aa13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 MYRIPQ8NFW9 859 aa13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 AMPD3Q01432 767 aa13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 CTCFLQ8NI51 663 aaPredicted RBP13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 STMN4Q9H169 189 aaPredicted RBP13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 DNAJC25Q9H1X3 360 aa13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 ORC3Q9UBD5 711 aaPredicted RBP13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 METP08581 1390 aa13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 PTGS1P23219 599 aa13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 SSRP1Q08945 709 aaKnown RBP13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 EYA1Q99502 592 aa13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 CPSF2Q9P2I0 782 aaKnown RBP13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 LMOD1P29536 600 aaPredicted RBP13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 CCT2P78371 535 aaKnown RBP13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 DAAM2Q86T65 1068 aa13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 MRPS27Q92552 414 aaKnown RBP13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 TTC14Q96N46 770 aa13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 SLC12A7Q9Y666 1083 aa13.79□□□□□ -0.2
AMBRA1-212ENST00000534300 LDHCP07864 332 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 PRPF4BQ13523 1007 aaKnown RBP13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 ANKRD13DQ6ZTN6 518 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 BRINP3Q76B58 766 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 EYA3Q99504 573 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 ZNF213O14771 459 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 TACC1O75410 805 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 NFATC2IPQ8NCF5 419 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 F13A1P00488 732 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 TRIM21P19474 475 aaKnown RBP13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 UTP14AQ9BVJ6 771 aaKnown RBP13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 USP16Q9Y5T5 823 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 PTPRCP08575 1304 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 SHROOM2Q13796 1616 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 A6NNZ2 444 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 IARSP41252 1262 aaKnown RBP13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 TUBB8Q3ZCM7 444 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 KRBA2Q6ZNG9 492 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 B4GALNT4Q76KP1 1039 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 OGFOD1Q8N543 542 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 FAM76AQ8TAV0 307 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 NAPBQ9H115 298 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 HOMER2Q9NSB8 354 aa13.78□□□□□ -0.2
AMBRA1-212ENST00000534300 SPATA31A6Q5VVP1 1343 aa13.77□□□□□ -0.2
AMBRA1-212ENST00000534300 KIF4AO95239 1232 aa13.77□□□□□ -0.2
AMBRA1-212ENST00000534300 CETN1Q12798 172 aa13.77□□□□□ -0.2
AMBRA1-212ENST00000534300 TMEM266Q2M3C6 531 aa13.77□□□□□ -0.2
AMBRA1-212ENST00000534300 AOPEPQ8N6M6 819 aa13.77□□□□□ -0.2
AMBRA1-212ENST00000534300 NEK1Q96PY6 1258 aa13.77□□□□□ -0.2
AMBRA1-212ENST00000534300 GOLGA8AA7E2F4 631 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 PHACTR2O75167 634 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 ZNF76P36508 570 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 GPR162Q16538 588 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 ISM2Q6H9L7 571 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 SYT10Q6XYQ8 523 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 CPLX4Q7Z7G2 160 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 DZIP1Q86YF9 867 aaKnown RBP13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 MACROD2A1Z1Q3 448 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 KRT86O43790 486 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 KRT83P78385 493 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 GTF3C6Q969F1 213 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 CCDC77Q9BR77 488 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 PLVAPQ9BX97 442 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 RMND1Q9NWS8 449 aa13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 THRAP3Q9Y2W1 955 aaKnown RBP13.77□□□□□ -0.21
AMBRA1-212ENST00000534300 AFF2P51816 1311 aa13.76□□□□□ -0.21
AMBRA1-212ENST00000534300 CCDC194A0A1B0GVG4 234 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms