RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 JARID2Q92833 1246 aaPredicted RBP19.5■□□□□ 0.71
DEPDC7-204ENST00000532078 HHIPL1Q96JK4 782 aa19.5■□□□□ 0.71
DEPDC7-204ENST00000532078 CCDC85AQ96PX6 553 aaPredicted RBP19.5■□□□□ 0.71
DEPDC7-204ENST00000532078 CDC5LQ99459 802 aaKnown RBP19.5■□□□□ 0.71
DEPDC7-204ENST00000532078 ZNF408Q9H9D4 720 aa19.5■□□□□ 0.71
DEPDC7-204ENST00000532078 SCN9AQ15858 1988 aa19.5■□□□□ 0.71
DEPDC7-204ENST00000532078 XDHP47989 1333 aa19.5■□□□□ 0.71
DEPDC7-204ENST00000532078 IGKV5-2P06315 115 aa19.49■□□□□ 0.71
DEPDC7-204ENST00000532078 TBC1D10BQ4KMP7 808 aaPredicted RBP19.49■□□□□ 0.71
DEPDC7-204ENST00000532078 SAMD7Q7Z3H4 446 aa19.49■□□□□ 0.71
DEPDC7-204ENST00000532078 ZNF609O15014 1411 aa19.49■□□□□ 0.71
DEPDC7-204ENST00000532078 MAP2K2P36507 400 aa19.48■□□□□ 0.71
DEPDC7-204ENST00000532078 MRS2Q9HD23 443 aa19.48■□□□□ 0.71
DEPDC7-204ENST00000532078 KCNQ5Q9NR82 932 aa19.48■□□□□ 0.71
DEPDC7-204ENST00000532078 PSME4Q14997 1843 aa19.48■□□□□ 0.71
DEPDC7-204ENST00000532078 SPEF2Q9C093 1822 aa19.47■□□□□ 0.71
DEPDC7-204ENST00000532078 VIL1P09327 827 aaKnown RBP19.47■□□□□ 0.71
DEPDC7-204ENST00000532078 KRT26Q7Z3Y9 468 aa19.47■□□□□ 0.71
DEPDC7-204ENST00000532078 ZNF467Q7Z7K2 595 aaPredicted RBP19.47■□□□□ 0.71
DEPDC7-204ENST00000532078 USP48Q86UV5 1035 aa19.47■□□□□ 0.71
DEPDC7-204ENST00000532078 NEURL1BA8MQ27 555 aa19.46■□□□□ 0.71
DEPDC7-204ENST00000532078 EGFRP00533 1210 aa19.46■□□□□ 0.71
DEPDC7-204ENST00000532078 ATP2B4P23634 1241 aa19.46■□□□□ 0.71
DEPDC7-204ENST00000532078 CWF19L2Q2TBE0 894 aaKnown RBP19.46■□□□□ 0.71
DEPDC7-204ENST00000532078 KIF4BQ2VIQ3 1234 aa19.46■□□□□ 0.71
DEPDC7-204ENST00000532078 DCPSQ96C86 337 aaKnown RBP19.46■□□□□ 0.71
DEPDC7-204ENST00000532078 AOC2O75106 756 aa19.45■□□□□ 0.7
DEPDC7-204ENST00000532078 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
DEPDC7-204ENST00000532078 TTLL11Q8NHH1 800 aa19.45■□□□□ 0.7
DEPDC7-204ENST00000532078 FANCIQ9NVI1 1328 aa19.45■□□□□ 0.7
DEPDC7-204ENST00000532078 ANP32CO43423 234 aa19.44■□□□□ 0.7
DEPDC7-204ENST00000532078 FLIIQ13045 1269 aa19.44■□□□□ 0.7
DEPDC7-204ENST00000532078 RBM26Q5T8P6 1007 aaKnown RBP19.44■□□□□ 0.7
DEPDC7-204ENST00000532078 G2E3Q7L622 706 aa19.44■□□□□ 0.7
DEPDC7-204ENST00000532078 UBE3BQ7Z3V4 1068 aa19.44■□□□□ 0.7
DEPDC7-204ENST00000532078 AGBL3Q8NEM8 1001 aa19.44■□□□□ 0.7
DEPDC7-204ENST00000532078 GREM2Q9H772 168 aa19.44■□□□□ 0.7
DEPDC7-204ENST00000532078 BSDC1Q9NW68 430 aaPredicted RBP19.44■□□□□ 0.7
DEPDC7-204ENST00000532078 MED23Q9ULK4 1368 aa19.44■□□□□ 0.7
DEPDC7-204ENST00000532078 CACNA1FO60840 1977 aa19.43■□□□□ 0.7
DEPDC7-204ENST00000532078 CA12O43570 354 aa19.43■□□□□ 0.7
DEPDC7-204ENST00000532078 BRPF1P55201 1214 aaPredicted RBP19.43■□□□□ 0.7
DEPDC7-204ENST00000532078 HUNKP57058 714 aa19.43■□□□□ 0.7
DEPDC7-204ENST00000532078 RSBN1LQ6PCB5 846 aaPredicted RBP19.43■□□□□ 0.7
DEPDC7-204ENST00000532078 GGA3Q9NZ52 723 aa19.43■□□□□ 0.7
DEPDC7-204ENST00000532078 ADM5C9JUS6 153 aa19.42■□□□□ 0.7
DEPDC7-204ENST00000532078 H7C1W4 665 aa19.42■□□□□ 0.7
DEPDC7-204ENST00000532078 ZNF280AP59817 542 aaPredicted RBP19.42■□□□□ 0.7
DEPDC7-204ENST00000532078 FKBP5Q13451 457 aaPredicted RBP19.42■□□□□ 0.7
DEPDC7-204ENST00000532078 PODNQ7Z5L7 613 aa19.42■□□□□ 0.7
DEPDC7-204ENST00000532078 SULF1Q8IWU6 871 aa19.42■□□□□ 0.7
DEPDC7-204ENST00000532078 MYH16Q9H6N6 1097 aa19.42■□□□□ 0.7
DEPDC7-204ENST00000532078 PCDHB8Q9UN66 801 aa19.42■□□□□ 0.7
DEPDC7-204ENST00000532078 TRPC6Q9Y210 931 aa19.42■□□□□ 0.7
DEPDC7-204ENST00000532078 USP17L3A6NCW0 530 aa19.41■□□□□ 0.7
DEPDC7-204ENST00000532078 USP17L4A6NCW7 530 aa19.41■□□□□ 0.7
DEPDC7-204ENST00000532078 TIE1P35590 1138 aa19.41■□□□□ 0.7
DEPDC7-204ENST00000532078 NOGQ13253 232 aa19.41■□□□□ 0.7
DEPDC7-204ENST00000532078 GCKRQ14397 625 aa19.41■□□□□ 0.7
DEPDC7-204ENST00000532078 USP17L1Q7RTZ2 530 aa19.41■□□□□ 0.7
DEPDC7-204ENST00000532078 WDR63Q8IWG1 891 aa19.41■□□□□ 0.7
DEPDC7-204ENST00000532078 GBA2Q9HCG7 927 aaPredicted RBP19.41■□□□□ 0.7
DEPDC7-204ENST00000532078 MINPP1Q9UNW1 487 aa19.41■□□□□ 0.7
DEPDC7-204ENST00000532078 POLR2AP24928 1970 aaKnown RBP19.41■□□□□ 0.7
DEPDC7-204ENST00000532078 IGHMBP2P38935 993 aaKnown RBP19.4■□□□□ 0.7
DEPDC7-204ENST00000532078 DLK2Q6UY11 383 aa19.4■□□□□ 0.7
DEPDC7-204ENST00000532078 C2orf69Q8N8R5 385 aa19.4■□□□□ 0.7
DEPDC7-204ENST00000532078 DNAAF4Q8WXU2 420 aa19.4■□□□□ 0.7
DEPDC7-204ENST00000532078 PLA2G12BQ9BX93 195 aa19.4■□□□□ 0.7
DEPDC7-204ENST00000532078 USP17L8P0C7I0 530 aa19.39■□□□□ 0.69
DEPDC7-204ENST00000532078 CCT4P50991 539 aaKnown RBP19.39■□□□□ 0.69
DEPDC7-204ENST00000532078 LINS1Q8NG48 757 aa19.39■□□□□ 0.69
DEPDC7-204ENST00000532078 GMLQ99445 158 aa19.39■□□□□ 0.69
DEPDC7-204ENST00000532078 MYOZ2Q9NPC6 264 aa19.38■□□□□ 0.69
DEPDC7-204ENST00000532078 ASTN2O75129 1339 aaPredicted RBP19.37■□□□□ 0.69
DEPDC7-204ENST00000532078 ZNF316A6NFI3 1004 aaPredicted RBP19.37■□□□□ 0.69
DEPDC7-204ENST00000532078 ECM2O94769 699 aaPredicted RBP19.37■□□□□ 0.69
DEPDC7-204ENST00000532078 ITGA6P23229 1130 aa19.37■□□□□ 0.69
DEPDC7-204ENST00000532078 FAM161AQ3B820 660 aa19.37■□□□□ 0.69
DEPDC7-204ENST00000532078 ANGEL2Q5VTE6 544 aaKnown RBP19.37■□□□□ 0.69
DEPDC7-204ENST00000532078 ASTLQ6HA08 431 aaPredicted RBP19.37■□□□□ 0.69
DEPDC7-204ENST00000532078 RGMBQ6NW40 437 aa19.37■□□□□ 0.69
DEPDC7-204ENST00000532078 TSKSQ9UJT2 592 aa19.37■□□□□ 0.69
DEPDC7-204ENST00000532078 LEMD3Q9Y2U8 911 aa19.37■□□□□ 0.69
DEPDC7-204ENST00000532078 SALL2Q9Y467 1007 aaPredicted RBP19.37■□□□□ 0.69
DEPDC7-204ENST00000532078 ZNF646O15015 1829 aaPredicted RBP19.37■□□□□ 0.69
DEPDC7-204ENST00000532078 MYO3BQ8WXR4 1341 aa19.36■□□□□ 0.69
DEPDC7-204ENST00000532078 PITPNM2Q9BZ72 1349 aa19.36■□□□□ 0.69
DEPDC7-204ENST00000532078 VAMP4O75379 141 aa19.36■□□□□ 0.69
DEPDC7-204ENST00000532078 CASP7P55210 303 aa19.36■□□□□ 0.69
DEPDC7-204ENST00000532078 EXOSC9Q06265 439 aaKnown RBP19.36■□□□□ 0.69
DEPDC7-204ENST00000532078 SCARF1Q14162 830 aa19.36■□□□□ 0.69
DEPDC7-204ENST00000532078 CCDC102AQ96A19 550 aa19.36■□□□□ 0.69
DEPDC7-204ENST00000532078 CDCA5Q96FF9 252 aa19.36■□□□□ 0.69
DEPDC7-204ENST00000532078 ABHD8Q96I13 439 aa19.36■□□□□ 0.69
DEPDC7-204ENST00000532078 MPHOSPH8Q99549 860 aa19.36■□□□□ 0.69
DEPDC7-204ENST00000532078 ANKRD2Q9GZV1 360 aa19.36■□□□□ 0.69
DEPDC7-204ENST00000532078 COA1Q9GZY4 146 aa19.36■□□□□ 0.69
DEPDC7-204ENST00000532078 WTIPA6NIX2 430 aaPredicted RBP19.35■□□□□ 0.69
DEPDC7-204ENST00000532078 BMP2KQ9NSY1 1161 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms