RNA–Protein interactions for RNA: ENST00000531432.1

PPP6R3-223, Transcript of protein phosphatase 6 regulatory subunit 3, human

TSL 3

Gene PPP6R3, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP6R3-223	ENST00000531432	SCARF2	Q96GP6	870 aa	Predicted RBP	10.98	□□□□□ -0.65
PPP6R3-223	ENST00000531432	POP1	Q99575	1024 aa	Known RBP	10.98	□□□□□ -0.65
PPP6R3-223	ENST00000531432	SUV39H2	Q9H5I1	410 aa		10.98	□□□□□ -0.65
PPP6R3-223	ENST00000531432	WWC3	Q9ULE0	1092 aa		10.98	□□□□□ -0.65
PPP6R3-223	ENST00000531432	GNB5	O14775	395 aa		10.97	□□□□□ -0.65
PPP6R3-223	ENST00000531432	SMNDC1	O75940	238 aa	Known RBP eCLIP	10.97	□□□□□ -0.65	1e-8	■□□□□ 9.4
PPP6R3-223	ENST00000531432	BAG6	P46379	1132 aa		10.96	□□□□□ -0.65
PPP6R3-223	ENST00000531432	PI16	Q6UXB8	463 aa		10.96	□□□□□ -0.65
PPP6R3-223	ENST00000531432	ILDR2	Q71H61	639 aa		10.96	□□□□□ -0.65
PPP6R3-223	ENST00000531432	EPS8L3	Q8TE67	593 aa	Known RBP	10.96	□□□□□ -0.65
PPP6R3-223	ENST00000531432	KIAA0319	Q5VV43	1072 aa		10.95	□□□□□ -0.66
PPP6R3-223	ENST00000531432	MSL1	Q68DK7	614 aa		10.95	□□□□□ -0.66
PPP6R3-223	ENST00000531432	TMEM102	Q8N9M5	508 aa	Predicted RBP	10.95	□□□□□ -0.66
PPP6R3-223	ENST00000531432	PLVAP	Q9BX97	442 aa		10.95	□□□□□ -0.66
PPP6R3-223	ENST00000531432	LACRT	Q9GZZ8	138 aa		10.95	□□□□□ -0.66
PPP6R3-223	ENST00000531432	PDE2A	O00408	941 aa	Predicted RBP	10.94	□□□□□ -0.66
PPP6R3-223	ENST00000531432	COL19A1	Q14993	1142 aa		10.94	□□□□□ -0.66
PPP6R3-223	ENST00000531432	NXPE3	Q969Y0	559 aa		10.94	□□□□□ -0.66
PPP6R3-223	ENST00000531432	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.93	□□□□□ -0.66
PPP6R3-223	ENST00000531432	IL22RA1	Q8N6P7	574 aa		10.93	□□□□□ -0.66
PPP6R3-223	ENST00000531432	TCF12	Q99081	682 aa		10.93	□□□□□ -0.66
PPP6R3-223	ENST00000531432	LDHB	P07195	334 aa	Known RBP	10.92	□□□□□ -0.66
PPP6R3-223	ENST00000531432	COL8A1	P27658	744 aa		10.92	□□□□□ -0.66
PPP6R3-223	ENST00000531432	WFDC8	Q8IUA0	241 aa		10.92	□□□□□ -0.66
PPP6R3-223	ENST00000531432	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.92	□□□□□ -0.66
PPP6R3-223	ENST00000531432	ADAM19	Q9H013	955 aa		10.92	□□□□□ -0.66
PPP6R3-223	ENST00000531432	LIN7B	Q9HAP6	207 aa		10.92	□□□□□ -0.66
PPP6R3-223	ENST00000531432	METTL12	A8MUP2	240 aa		10.91	□□□□□ -0.66
PPP6R3-223	ENST00000531432	PIK3R2	O00459	728 aa		10.91	□□□□□ -0.66
PPP6R3-223	ENST00000531432	GADD45B	O75293	160 aa	Predicted RBP	10.91	□□□□□ -0.66
PPP6R3-223	ENST00000531432	ERCC3	P19447	782 aa		10.91	□□□□□ -0.66
PPP6R3-223	ENST00000531432	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	10.91	□□□□□ -0.66
PPP6R3-223	ENST00000531432	EAPP	Q56P03	285 aa	Predicted RBP	10.91	□□□□□ -0.66
PPP6R3-223	ENST00000531432	TRAPPC3L	Q5T215	181 aa		10.91	□□□□□ -0.66
PPP6R3-223	ENST00000531432	EHD4	Q9H223	541 aa		10.91	□□□□□ -0.66
PPP6R3-223	ENST00000531432	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.91	□□□□□ -0.66
PPP6R3-223	ENST00000531432	FAM229A	H3BQW9	127 aa		10.9	□□□□□ -0.66
PPP6R3-223	ENST00000531432	PTPRA	P18433	802 aa		10.9	□□□□□ -0.66
PPP6R3-223	ENST00000531432	CDC27	P30260	824 aa		10.9	□□□□□ -0.66
PPP6R3-223	ENST00000531432	ATP2B2	Q01814	1243 aa		10.9	□□□□□ -0.66
PPP6R3-223	ENST00000531432	ALG1L	Q6GMV1	187 aa		10.9	□□□□□ -0.66
PPP6R3-223	ENST00000531432	FBXO33	Q7Z6M2	555 aa		10.9	□□□□□ -0.66
PPP6R3-223	ENST00000531432	CCNJL	Q8IV13	435 aa		10.9	□□□□□ -0.66
PPP6R3-223	ENST00000531432	FBF1	Q8TES7	1133 aa		10.9	□□□□□ -0.66
PPP6R3-223	ENST00000531432	EPHA1	P21709	976 aa		10.89	□□□□□ -0.67
PPP6R3-223	ENST00000531432	GRM2	Q14416	872 aa		10.89	□□□□□ -0.67
PPP6R3-223	ENST00000531432	GLIS3	Q8NEA6	775 aa		10.89	□□□□□ -0.67
PPP6R3-223	ENST00000531432	ASAP3	Q8TDY4	903 aa		10.89	□□□□□ -0.67
PPP6R3-223	ENST00000531432	RNF19A	Q9NV58	838 aa		10.89	□□□□□ -0.67
PPP6R3-223	ENST00000531432	NLRP2	Q9NX02	1062 aa		10.89	□□□□□ -0.67
PPP6R3-223	ENST00000531432	NOP53	Q9NZM5	478 aa	Known RBP	10.89	□□□□□ -0.67
PPP6R3-223	ENST00000531432	SOX13	Q9UN79	622 aa		10.89	□□□□□ -0.67
PPP6R3-223	ENST00000531432		A0A0A0MRY4	1105 aa		10.88	□□□□□ -0.67
PPP6R3-223	ENST00000531432	RNF225	M0QZC1	329 aa	Predicted RBP	10.88	□□□□□ -0.67
PPP6R3-223	ENST00000531432	GRIA4	P48058	902 aa		10.88	□□□□□ -0.67
PPP6R3-223	ENST00000531432	GSK3A	P49840	483 aa		10.88	□□□□□ -0.67
PPP6R3-223	ENST00000531432	TAGLN	Q01995	201 aa	Known RBP	10.88	□□□□□ -0.67
PPP6R3-223	ENST00000531432	TXNDC11	Q6PKC3	985 aa		10.88	□□□□□ -0.67
PPP6R3-223	ENST00000531432	CACTIN-AS1	Q8N1I8	211 aa		10.88	□□□□□ -0.67
PPP6R3-223	ENST00000531432	SPRED3	Q2MJR0	410 aa		10.87	□□□□□ -0.67
PPP6R3-223	ENST00000531432	MUC3B	Q9H195	1237 aa		10.87	□□□□□ -0.67
PPP6R3-223	ENST00000531432	ABCB6	Q9NP58	842 aa		10.87	□□□□□ -0.67
PPP6R3-223	ENST00000531432	PPME1	Q9Y570	386 aa		10.87	□□□□□ -0.67
PPP6R3-223	ENST00000531432	LINC01387	J3KSC0	135 aa		10.86	□□□□□ -0.67
PPP6R3-223	ENST00000531432	PRPF40A	O75400	957 aa	Known RBP	10.86	□□□□□ -0.67
PPP6R3-223	ENST00000531432	CDC25B	P30305	580 aa		10.86	□□□□□ -0.67
PPP6R3-223	ENST00000531432	KCNMA1	Q12791	1236 aa		10.86	□□□□□ -0.67
PPP6R3-223	ENST00000531432	PRPF40B	Q6NWY9	871 aa	Known RBP	10.86	□□□□□ -0.67
PPP6R3-223	ENST00000531432	BSND	Q8WZ55	320 aa		10.86	□□□□□ -0.67
PPP6R3-223	ENST00000531432	BCO2	Q9BYV7	579 aa		10.86	□□□□□ -0.67
PPP6R3-223	ENST00000531432		A0A096LPE4	126 aa		10.85	□□□□□ -0.67
PPP6R3-223	ENST00000531432		A0A1W2PPZ6	126 aa		10.85	□□□□□ -0.67
PPP6R3-223	ENST00000531432	SPDYE3	A6NKU9	549 aa		10.85	□□□□□ -0.67
PPP6R3-223	ENST00000531432	DEAF1	O75398	565 aa	Predicted RBP	10.85	□□□□□ -0.67
PPP6R3-223	ENST00000531432	VN1R5	Q7Z5H4	357 aa		10.85	□□□□□ -0.67
PPP6R3-223	ENST00000531432	DUSP9	Q99956	384 aa	Known RBP	10.85	□□□□□ -0.67
PPP6R3-223	ENST00000531432	TRIM28	Q13263	835 aa	Known RBP	10.84	□□□□□ -0.67
PPP6R3-223	ENST00000531432	SETDB1	Q15047	1291 aa		10.84	□□□□□ -0.67
PPP6R3-223	ENST00000531432	NXPE4	Q6UWF7	544 aa		10.84	□□□□□ -0.67
PPP6R3-223	ENST00000531432	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.84	□□□□□ -0.67
PPP6R3-223	ENST00000531432	OSBPL7	Q9BZF2	842 aa		10.84	□□□□□ -0.67
PPP6R3-223	ENST00000531432		H3BRJ5	948 aa		10.83	□□□□□ -0.68
PPP6R3-223	ENST00000531432	DTWD1	Q8N5C7	304 aa		10.83	□□□□□ -0.68
PPP6R3-223	ENST00000531432	TRAK1	Q9UPV9	953 aa		10.83	□□□□□ -0.68
PPP6R3-223	ENST00000531432	TMEM238L	A0A1B0GVL6	79 aa		10.82	□□□□□ -0.68
PPP6R3-223	ENST00000531432	FAM177B	A6PVY3	158 aa		10.82	□□□□□ -0.68
PPP6R3-223	ENST00000531432	RAC1	P63000	192 aa		10.82	□□□□□ -0.68
PPP6R3-223	ENST00000531432	RASSF7	Q02833	373 aa		10.82	□□□□□ -0.68
PPP6R3-223	ENST00000531432	PRRT3	Q5FWE3	981 aa		10.82	□□□□□ -0.68
PPP6R3-223	ENST00000531432	BCL2L13	Q9BXK5	485 aa		10.82	□□□□□ -0.68
PPP6R3-223	ENST00000531432	TM4SF5	O14894	197 aa		10.81	□□□□□ -0.68
PPP6R3-223	ENST00000531432	SPATA31C1	P0DKV0	1188 aa		10.81	□□□□□ -0.68
PPP6R3-223	ENST00000531432	ITPKA	P23677	461 aa		10.81	□□□□□ -0.68
PPP6R3-223	ENST00000531432	FCGRT	P55899	365 aa		10.81	□□□□□ -0.68
PPP6R3-223	ENST00000531432	CABP4	P57796	275 aa		10.81	□□□□□ -0.68
PPP6R3-223	ENST00000531432	HGSNAT	Q68CP4	663 aa		10.81	□□□□□ -0.68
PPP6R3-223	ENST00000531432	FBXO11	Q86XK2	927 aa		10.81	□□□□□ -0.68
PPP6R3-223	ENST00000531432	GALNT11	Q8NCW6	608 aa		10.81	□□□□□ -0.68
PPP6R3-223	ENST00000531432	DCAF5	Q96JK2	942 aa		10.81	□□□□□ -0.68
PPP6R3-223	ENST00000531432	CARD10	Q9BWT7	1032 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms