RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 INCENPQ9NQS7 918 aa8.76□□□□□ -1.01
C11orf54-207ENST00000528288 CEP126Q9P2H0 1117 aa8.76□□□□□ -1.01
C11orf54-207ENST00000528288 ELP1O95163 1332 aa8.76□□□□□ -1.01
C11orf54-207ENST00000528288 A0A1B0GVL5 298 aa8.76□□□□□ -1.01
C11orf54-207ENST00000528288 SNAP23O00161 211 aa8.76□□□□□ -1.01
C11orf54-207ENST00000528288 PFKFB2O60825 505 aa8.76□□□□□ -1.01
C11orf54-207ENST00000528288 CCDC57Q2TAC2 916 aa8.76□□□□□ -1.01
C11orf54-207ENST00000528288 XAGE2Q96GT9 111 aa8.76□□□□□ -1.01
C11orf54-207ENST00000528288 PUS7LQ9H0K6 701 aaKnown RBP8.76□□□□□ -1.01
C11orf54-207ENST00000528288 SIPA1L3O60292 1781 aaPredicted RBP8.76□□□□□ -1.01
C11orf54-207ENST00000528288 BIN1O00499 593 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 DYNC1I1O14576 645 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 ILDR1Q86SU0 546 aaPredicted RBP8.75□□□□□ -1.01
C11orf54-207ENST00000528288 ZNF710Q8N1W2 664 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 MYRIPQ8NFW9 859 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 DDX19AQ9NUU7 478 aaKnown RBP8.75□□□□□ -1.01
C11orf54-207ENST00000528288 ASAP1Q9ULH1 1129 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 RIOK3O14730 519 aaKnown RBP8.75□□□□□ -1.01
C11orf54-207ENST00000528288 IL15P40933 162 aaPredicted RBP8.75□□□□□ -1.01
C11orf54-207ENST00000528288 ZNF75DP51815 510 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 FSIP1Q8NA03 581 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 HELBQ8NG08 1087 aaPredicted RBP8.75□□□□□ -1.01
C11orf54-207ENST00000528288 ZNF592Q92610 1267 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 AIFM3Q96NN9 605 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 JCADQ9P266 1359 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 AFDNP55196 1824 aaKnown RBP8.75□□□□□ -1.01
C11orf54-207ENST00000528288 EXOSC10Q01780 885 aaKnown RBP8.75□□□□□ -1.01
C11orf54-207ENST00000528288 FILIP1Q7Z7B0 1213 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 DNAJC10Q8IXB1 793 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 CLIP2Q9UDT6 1046 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 FDPSP14324 419 aaKnown RBP8.75□□□□□ -1.01
C11orf54-207ENST00000528288 TERF1P54274 439 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 NAA30Q147X3 362 aaPredicted RBP8.75□□□□□ -1.01
C11orf54-207ENST00000528288 SMARCC2Q8TAQ2 1214 aa8.75□□□□□ -1.01
C11orf54-207ENST00000528288 SYTL4Q96C24 671 aaPredicted RBP8.75□□□□□ -1.01
C11orf54-207ENST00000528288 ALDH8A1Q9H2A2 487 aaPredicted RBP8.75□□□□□ -1.01
C11orf54-207ENST00000528288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.018e-7■■■□□ 14.9
C11orf54-207ENST00000528288 FOXP2O15409 715 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 FGAP02671 866 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 APPP05067 770 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 CACTINQ8WUQ7 758 aaKnown RBP8.74□□□□□ -1.01
C11orf54-207ENST00000528288 HELLSQ9NRZ9 838 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 CLIC4Q9Y696 253 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 TRPM3Q9HCF6 1732 aaPredicted RBP8.74□□□□□ -1.01
C11orf54-207ENST00000528288 SH3TC1Q8TE82 1336 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 KLF18A0A0U1RQI7 1052 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 UBE2Q2LH0YL09 131 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 EVA1CP58658 441 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 HLFQ16534 295 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 PTPN21Q16825 1174 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 CFAP45Q9UL16 551 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 MST1RQ04912 1400 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 SCN11AQ9UI33 1791 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 PALLDQ8WX93 1383 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 GOLGA8BA8MQT2 603 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 GOLGA6L6A8MZA4 724 aa8.74□□□□□ -1.01
C11orf54-207ENST00000528288 GOLGA6L19H0YKK7 550 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 PRC1O43663 620 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 CCDC158Q5M9N0 1113 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 ZSCAN25Q6NSZ9 544 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 CCDC73Q6ZRK6 1079 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 SENP2Q9HC62 589 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 SPTLC3Q9NUV7 552 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 TRMT1Q9NXH9 659 aaKnown RBP8.73□□□□□ -1.01
C11orf54-207ENST00000528288 SPATA31A3Q5VYP0 1347 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 SPDYE4A6NLX3 237 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 IDH1O75874 414 aaKnown RBP8.73□□□□□ -1.01
C11orf54-207ENST00000528288 MARCKSP29966 332 aaPredicted RBP8.73□□□□□ -1.01
C11orf54-207ENST00000528288 SNW1Q13573 536 aaKnown RBP8.73□□□□□ -1.01
C11orf54-207ENST00000528288 SF3A1Q15459 793 aaKnown RBP8.73□□□□□ -1.01
C11orf54-207ENST00000528288 SDF4Q9BRK5 362 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 MYL10Q9BUA6 226 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 DSCC1Q9BVC3 393 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 ZSCAN16Q9H4T2 348 aaPredicted RBP8.73□□□□□ -1.01
C11orf54-207ENST00000528288 BCL2L12Q9HB09 334 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 PCDHA7Q9UN72 937 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 PHRF1Q9P1Y6 1649 aaKnown RBP8.73□□□□□ -1.01
C11orf54-207ENST00000528288 USP27XA6NNY8 438 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 BECN2A8MW95 431 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 KINO60870 393 aaKnown RBP8.73□□□□□ -1.01
C11orf54-207ENST00000528288 AOPEPQ8N6M6 819 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 CCDC191Q8NCU4 936 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 KIF3AQ9Y496 699 aa8.73□□□□□ -1.01
C11orf54-207ENST00000528288 NDUFA8P51970 172 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 CBX1P83916 185 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 METTL24Q5JXM2 366 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 GREM2Q9H772 168 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 MRC1P22897 1456 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 CARMIL3Q8ND23 1372 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 KIF28PB7ZC32 967 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 PLA2G4DQ86XP0 818 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 ORC3Q9UBD5 711 aaPredicted RBP8.72□□□□□ -1.01
C11orf54-207ENST00000528288 RCOR1Q9UKL0 485 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 ARFGEF2Q9Y6D5 1785 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 HMGB1P09429 215 aaKnown RBP8.72□□□□□ -1.01
C11orf54-207ENST00000528288 ANTXR2P58335 489 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 IQCB1Q15051 598 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 STK38Q15208 465 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 LDHAL6AQ6ZMR3 332 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 BRINP3Q76B58 766 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms