RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 TIMELESSQ9UNS1 1208 aa7.53□□□□□ -1.2
CHKA-204ENST00000528235 WASF2Q9Y6W5 498 aa7.53□□□□□ -1.2
CHKA-204ENST00000528235 PASKQ96RG2 1323 aa7.52□□□□□ -1.2
CHKA-204ENST00000528235 SLX4Q8IY92 1834 aa7.52□□□□□ -1.2
CHKA-204ENST00000528235 TONSLQ96HA7 1378 aa7.52□□□□□ -1.21
CHKA-204ENST00000528235 NFKBIEO00221 500 aa7.52□□□□□ -1.21
CHKA-204ENST00000528235 PTCD1O75127 700 aaKnown RBP7.52□□□□□ -1.21
CHKA-204ENST00000528235 DDNO94850 711 aaPredicted RBP7.52□□□□□ -1.21
CHKA-204ENST00000528235 CABP4P57796 275 aa7.52□□□□□ -1.21
CHKA-204ENST00000528235 EAPPQ56P03 285 aaPredicted RBP7.52□□□□□ -1.21
CHKA-204ENST00000528235 LCE2AQ5TA79 106 aaPredicted RBP7.52□□□□□ -1.21
CHKA-204ENST00000528235 USPL1Q5W0Q7 1092 aa7.52□□□□□ -1.21
CHKA-204ENST00000528235 ZNF622Q969S3 477 aaKnown RBP eCLIP7.52□□□□□ -1.21
CHKA-204ENST00000528235 UNC93B1Q9H1C4 597 aa7.52□□□□□ -1.21
CHKA-204ENST00000528235 WDR33Q9C0J8 1336 aaKnown RBP7.52□□□□□ -1.21
CHKA-204ENST00000528235 SIAH2O43255 324 aa7.51□□□□□ -1.21
CHKA-204ENST00000528235 SERPINB2P05120 415 aa7.51□□□□□ -1.21
CHKA-204ENST00000528235 SH3BP2P78314 561 aa7.51□□□□□ -1.21
CHKA-204ENST00000528235 KCNH2Q12809 1159 aa7.51□□□□□ -1.21
CHKA-204ENST00000528235 ABT1Q9ULW3 272 aaKnown RBP7.51□□□□□ -1.21
CHKA-204ENST00000528235 EMILIN1Q9Y6C2 1016 aa7.51□□□□□ -1.21
CHKA-204ENST00000528235 COL11A2P13942 1736 aaPredicted RBP7.51□□□□□ -1.21
CHKA-204ENST00000528235 NCAPD2Q15021 1401 aa7.51□□□□□ -1.21
CHKA-204ENST00000528235 AKAP11Q9UKA4 1901 aa7.5□□□□□ -1.21
CHKA-204ENST00000528235 RASSF10A6NK89 507 aa7.5□□□□□ -1.21
CHKA-204ENST00000528235 C21orf2O43822 256 aa7.5□□□□□ -1.21
CHKA-204ENST00000528235 GRM1Q13255 1194 aa7.5□□□□□ -1.21
CHKA-204ENST00000528235 TBC1D2Q9BYX2 928 aa7.5□□□□□ -1.21
CHKA-204ENST00000528235 TAOK3Q9H2K8 898 aa7.5□□□□□ -1.21
CHKA-204ENST00000528235 ADAMTSL1Q8N6G6 1762 aa7.49□□□□□ -1.21
CHKA-204ENST00000528235 SNRPBP14678 240 aaKnown RBP7.49□□□□□ -1.21
CHKA-204ENST00000528235 ECE1P42892 770 aa7.49□□□□□ -1.21
CHKA-204ENST00000528235 NFIXQ14938 502 aa7.49□□□□□ -1.21
CHKA-204ENST00000528235 PLEKHO1Q53GL0 409 aaPredicted RBP7.49□□□□□ -1.21
CHKA-204ENST00000528235 BAP1Q92560 729 aa7.49□□□□□ -1.21
CHKA-204ENST00000528235 TAF1DQ9H5J8 278 aaPredicted RBP7.49□□□□□ -1.21
CHKA-204ENST00000528235 NARFQ9UHQ1 456 aa7.49□□□□□ -1.21
CHKA-204ENST00000528235 WASHC2AQ641Q2 1341 aa7.49□□□□□ -1.21
CHKA-204ENST00000528235 THSD7BQ9C0I4 1608 aa7.49□□□□□ -1.21
CHKA-204ENST00000528235 ST20-MTHFSA0A0A6YYL1 179 aa7.48□□□□□ -1.21
CHKA-204ENST00000528235 NPHP1O15259 732 aa7.48□□□□□ -1.21
CHKA-204ENST00000528235 CAPN5O15484 640 aaPredicted RBP7.48□□□□□ -1.21
CHKA-204ENST00000528235 VARSP26640 1264 aaKnown RBP7.48□□□□□ -1.21
CHKA-204ENST00000528235 PDE6BP35913 854 aa7.48□□□□□ -1.21
CHKA-204ENST00000528235 MTHFSP49914 203 aa7.48□□□□□ -1.21
CHKA-204ENST00000528235 NFX1Q12986 1120 aaKnown RBP7.48□□□□□ -1.21
CHKA-204ENST00000528235 C1orf141Q5JVX7 400 aa7.48□□□□□ -1.21
CHKA-204ENST00000528235 ZNF530Q6P9A1 599 aaPredicted RBP7.48□□□□□ -1.21
CHKA-204ENST00000528235 RSBN1LQ6PCB5 846 aaPredicted RBP7.48□□□□□ -1.21
CHKA-204ENST00000528235 BICDL1Q6ZP65 573 aa7.48□□□□□ -1.21
CHKA-204ENST00000528235 PNMA8AQ86V59 439 aaPredicted RBP7.48□□□□□ -1.21
CHKA-204ENST00000528235 PARP9Q8IXQ6 854 aa7.48□□□□□ -1.21
CHKA-204ENST00000528235 CNTROBQ8N137 903 aa7.48□□□□□ -1.21
CHKA-204ENST00000528235 ZNF511Q8NB15 262 aa7.48□□□□□ -1.21
CHKA-204ENST00000528235 NFATC2IPQ8NCF5 419 aa7.48□□□□□ -1.21
CHKA-204ENST00000528235 HACL1Q9UJ83 578 aa7.48□□□□□ -1.21
CHKA-204ENST00000528235 LTBP3Q9NS15 1303 aa7.48□□□□□ -1.21
CHKA-204ENST00000528235 TRIM66O15016 1216 aa7.47□□□□□ -1.21
CHKA-204ENST00000528235 CTHP32929 405 aa7.47□□□□□ -1.21
CHKA-204ENST00000528235 EPHX2P34913 555 aa7.47□□□□□ -1.21
CHKA-204ENST00000528235 LINC01559Q495D7 138 aa7.47□□□□□ -1.21
CHKA-204ENST00000528235 SOGA3Q5TF21 947 aa7.47□□□□□ -1.21
CHKA-204ENST00000528235 MAP1SQ66K74 1059 aaPredicted RBP7.47□□□□□ -1.21
CHKA-204ENST00000528235 INTS5Q6P9B9 1019 aaKnown RBP7.47□□□□□ -1.21
CHKA-204ENST00000528235 GPR101Q96P66 508 aaPredicted RBP7.47□□□□□ -1.21
CHKA-204ENST00000528235 MCOLN1Q9GZU1 580 aa7.47□□□□□ -1.21
CHKA-204ENST00000528235 ZBTB3Q9H5J0 574 aa7.47□□□□□ -1.21
CHKA-204ENST00000528235 COL15A1P39059 1388 aa7.46□□□□□ -1.21
CHKA-204ENST00000528235 CARMIL3Q8ND23 1372 aa7.46□□□□□ -1.21
CHKA-204ENST00000528235 TERTO14746 1132 aaKnown RBP7.46□□□□□ -1.22
CHKA-204ENST00000528235 SPTLC1O15269 473 aa7.46□□□□□ -1.22
CHKA-204ENST00000528235 DGKZQ13574 1117 aa7.46□□□□□ -1.22
CHKA-204ENST00000528235 AMOTQ4VCS5 1084 aa7.46□□□□□ -1.22
CHKA-204ENST00000528235 PRPF38BQ5VTL8 546 aaKnown RBP7.46□□□□□ -1.22
CHKA-204ENST00000528235 LYPD8Q6UX82 237 aa7.46□□□□□ -1.22
CHKA-204ENST00000528235 DNAJC10Q8IXB1 793 aa7.46□□□□□ -1.22
CHKA-204ENST00000528235 MPNDQ8N594 471 aa7.46□□□□□ -1.22
CHKA-204ENST00000528235 CNKSR1Q969H4 720 aa7.46□□□□□ -1.22
CHKA-204ENST00000528235 CAPNS2Q96L46 248 aa7.46□□□□□ -1.22
CHKA-204ENST00000528235 TESK2Q96S53 571 aa7.46□□□□□ -1.22
CHKA-204ENST00000528235 PODXL2Q9NZ53 605 aa7.46□□□□□ -1.22
CHKA-204ENST00000528235 SOS1Q07889 1333 aaPredicted RBP7.46□□□□□ -1.22
CHKA-204ENST00000528235 POLR2AP24928 1970 aaKnown RBP7.46□□□□□ -1.22
CHKA-204ENST00000528235 SCN7AQ01118 1682 aa7.45□□□□□ -1.22
CHKA-204ENST00000528235 LTBP1Q14766 1721 aa7.45□□□□□ -1.22
CHKA-204ENST00000528235 INSM1Q01101 510 aaPredicted RBP7.45□□□□□ -1.22
CHKA-204ENST00000528235 EIF4A2Q14240 407 aaKnown RBP7.45□□□□□ -1.22
CHKA-204ENST00000528235 CYP4F22Q6NT55 531 aa7.45□□□□□ -1.22
CHKA-204ENST00000528235 RIC3Q7Z5B4 369 aa7.45□□□□□ -1.22
CHKA-204ENST00000528235 BRIP1Q9BX63 1249 aa7.45□□□□□ -1.22
CHKA-204ENST00000528235 DDX21Q9NR30 783 aaKnown RBP eCLIP7.45□□□□□ -1.22
CHKA-204ENST00000528235 A0A087WZG4 1122 aa7.44□□□□□ -1.22
CHKA-204ENST00000528235 WIPF1O43516 503 aa7.44□□□□□ -1.22
CHKA-204ENST00000528235 CA12O43570 354 aa7.44□□□□□ -1.22
CHKA-204ENST00000528235 CYP19A1P11511 503 aaPredicted RBP7.44□□□□□ -1.22
CHKA-204ENST00000528235 CANXP27824 592 aaKnown RBP7.44□□□□□ -1.22
CHKA-204ENST00000528235 MAP2K2P36507 400 aa7.44□□□□□ -1.22
CHKA-204ENST00000528235 CDCA8Q53HL2 280 aa7.44□□□□□ -1.22
CHKA-204ENST00000528235 NPM2Q86SE8 214 aaKnown RBP7.44□□□□□ -1.22
CHKA-204ENST00000528235 ZBTB1Q9Y2K1 713 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms