RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 G3V3G9 751 aa13.83□□□□□ -0.2
CCDC84-205ENST00000528088 OSBPP22059 807 aa13.83□□□□□ -0.2
CCDC84-205ENST00000528088 CRAMP1Q96RY5 1269 aa13.83□□□□□ -0.2
CCDC84-205ENST00000528088 TMX4Q9H1E5 349 aaPredicted RBP13.83□□□□□ -0.2
CCDC84-205ENST00000528088 TNNQ9UQP3 1299 aa13.83□□□□□ -0.2
CCDC84-205ENST00000528088 ABCC4O15439 1325 aa13.82□□□□□ -0.2
CCDC84-205ENST00000528088 H7C1W4 665 aa13.82□□□□□ -0.2
CCDC84-205ENST00000528088 MS4A1P11836 297 aa13.82□□□□□ -0.2
CCDC84-205ENST00000528088 VEGFAP15692 232 aaPredicted RBP13.82□□□□□ -0.2
CCDC84-205ENST00000528088 HTRA3P83110 453 aa13.82□□□□□ -0.2
CCDC84-205ENST00000528088 CCDC152Q4G0S7 254 aa13.82□□□□□ -0.2
CCDC84-205ENST00000528088 DZIP1LQ8IYY4 767 aaKnown RBP13.82□□□□□ -0.2
CCDC84-205ENST00000528088 RTKN2Q8IZC4 609 aa13.82□□□□□ -0.2
CCDC84-205ENST00000528088 SPEF2Q9C093 1822 aa13.82□□□□□ -0.2
CCDC84-205ENST00000528088 PPEF1O14829 653 aaPredicted RBP13.81□□□□□ -0.2
CCDC84-205ENST00000528088 PLIN1O60240 522 aa13.81□□□□□ -0.2
CCDC84-205ENST00000528088 CTSWP56202 376 aa13.81□□□□□ -0.2
CCDC84-205ENST00000528088 ITPRIPQ8IWB1 547 aa13.81□□□□□ -0.2
CCDC84-205ENST00000528088 OXER1Q8TDS5 423 aa13.81□□□□□ -0.2
CCDC84-205ENST00000528088 DICER1Q9UPY3 1922 aaKnown RBP13.81□□□□□ -0.2
CCDC84-205ENST00000528088 ZNF541Q9H0D2 1346 aa13.81□□□□□ -0.2
CCDC84-205ENST00000528088 UBTFL1P0CB47 393 aaPredicted RBP13.8□□□□□ -0.2
CCDC84-205ENST00000528088 PLCG2P16885 1265 aa13.8□□□□□ -0.2
CCDC84-205ENST00000528088 IARSP41252 1262 aaKnown RBP13.8□□□□□ -0.2
CCDC84-205ENST00000528088 TMEM57Q8N5G2 664 aa13.8□□□□□ -0.2
CCDC84-205ENST00000528088 DAXXQ9UER7 740 aaPredicted RBP13.8□□□□□ -0.2
CCDC84-205ENST00000528088 COL4A5P29400 1685 aa13.8□□□□□ -0.2
CCDC84-205ENST00000528088 NBPF7P0C2Y1 421 aaPredicted RBP13.8□□□□□ -0.2
CCDC84-205ENST00000528088 POTEIP0CG38 1075 aa13.8□□□□□ -0.2
CCDC84-205ENST00000528088 POTEJP0CG39 1038 aa13.8□□□□□ -0.2
CCDC84-205ENST00000528088 SF3B3Q15393 1217 aaKnown RBP13.8□□□□□ -0.2
CCDC84-205ENST00000528088 PSMD1Q99460 953 aa13.8□□□□□ -0.2
CCDC84-205ENST00000528088 WDR90Q96KV7 1748 aa13.79□□□□□ -0.2
CCDC84-205ENST00000528088 APLP1P51693 650 aa13.79□□□□□ -0.2
CCDC84-205ENST00000528088 FSTL1Q12841 308 aa13.79□□□□□ -0.2
CCDC84-205ENST00000528088 GRAPQ13588 217 aa13.79□□□□□ -0.2
CCDC84-205ENST00000528088 INTS3Q68E01 1043 aaKnown RBP13.79□□□□□ -0.2
CCDC84-205ENST00000528088 GRAPLQ8TC17 118 aaPredicted RBP13.79□□□□□ -0.2
CCDC84-205ENST00000528088 PANK1Q8TE04 598 aa13.79□□□□□ -0.2
CCDC84-205ENST00000528088 SUCLG2Q96I99 432 aa13.79□□□□□ -0.2
CCDC84-205ENST00000528088 HDAC5Q9UQL6 1122 aa13.79□□□□□ -0.2
CCDC84-205ENST00000528088 FZD9O00144 591 aa13.78□□□□□ -0.2
CCDC84-205ENST00000528088 CASP7P55210 303 aa13.78□□□□□ -0.2
CCDC84-205ENST00000528088 MAP2K5Q13163 448 aa13.78□□□□□ -0.2
CCDC84-205ENST00000528088 TAF7LQ5H9L4 462 aa13.78□□□□□ -0.2
CCDC84-205ENST00000528088 CC2D2BQ6DHV5 1058 aa13.78□□□□□ -0.2
CCDC84-205ENST00000528088 SMC1BQ8NDV3 1235 aa13.78□□□□□ -0.2
CCDC84-205ENST00000528088 CCDC102AQ96A19 550 aa13.78□□□□□ -0.2
CCDC84-205ENST00000528088 CDC5LQ99459 802 aaKnown RBP13.78□□□□□ -0.2
CCDC84-205ENST00000528088 USP44Q9H0E7 712 aa13.78□□□□□ -0.2
CCDC84-205ENST00000528088 GREM2Q9H772 168 aa13.78□□□□□ -0.2
CCDC84-205ENST00000528088 SEC31BQ9NQW1 1179 aa13.78□□□□□ -0.2
CCDC84-205ENST00000528088 GNAI3P08754 354 aa13.77□□□□□ -0.21
CCDC84-205ENST00000528088 FAM161AQ3B820 660 aa13.77□□□□□ -0.21
CCDC84-205ENST00000528088 LMBR1LQ6UX01 489 aa13.77□□□□□ -0.21
CCDC84-205ENST00000528088 ANKRD18AQ8IVF6 992 aa13.77□□□□□ -0.21
CCDC84-205ENST00000528088 DNAJC5GQ8N7S2 189 aa13.77□□□□□ -0.21
CCDC84-205ENST00000528088 TTLL11Q8NHH1 800 aa13.77□□□□□ -0.21
CCDC84-205ENST00000528088 DDX12PQ92771 950 aa13.77□□□□□ -0.21
CCDC84-205ENST00000528088 L3MBTL3Q96JM7 780 aaPredicted RBP13.77□□□□□ -0.21
CCDC84-205ENST00000528088 MEIS3Q99687 375 aa13.77□□□□□ -0.21
CCDC84-205ENST00000528088 PLA2G12BQ9BX93 195 aa13.77□□□□□ -0.21
CCDC84-205ENST00000528088 ATP6V0A2Q9Y487 856 aa13.77□□□□□ -0.21
CCDC84-205ENST00000528088 ANKRD18BA2A2Z9 1011 aa13.76□□□□□ -0.21
CCDC84-205ENST00000528088 BBOX1O75936 387 aa13.76□□□□□ -0.21
CCDC84-205ENST00000528088 RLBP1P12271 317 aa13.76□□□□□ -0.21
CCDC84-205ENST00000528088 IFIT5Q13325 482 aaKnown RBP13.76□□□□□ -0.21
CCDC84-205ENST00000528088 CCDC57Q2TAC2 916 aa13.76□□□□□ -0.21
CCDC84-205ENST00000528088 CELF1Q92879 486 aaKnown RBP13.76□□□□□ -0.21
CCDC84-205ENST00000528088 FAM117AQ9C073 453 aa13.76□□□□□ -0.21
CCDC84-205ENST00000528088 BICC1Q9H694 974 aaKnown RBP13.76□□□□□ -0.21
CCDC84-205ENST00000528088 COL4A1P02462 1669 aa13.76□□□□□ -0.21
CCDC84-205ENST00000528088 UTYO14607 1347 aa13.76□□□□□ -0.21
CCDC84-205ENST00000528088 IRF6O14896 467 aa13.75□□□□□ -0.21
CCDC84-205ENST00000528088 ITGA6P23229 1130 aa13.75□□□□□ -0.21
CCDC84-205ENST00000528088 IGHMBP2P38935 993 aaKnown RBP13.75□□□□□ -0.21
CCDC84-205ENST00000528088 FOXO4P98177 505 aa13.75□□□□□ -0.21
CCDC84-205ENST00000528088 EPHA10Q5JZY3 1008 aa13.75□□□□□ -0.21
CCDC84-205ENST00000528088 LARGE2Q8N3Y3 721 aa13.75□□□□□ -0.21
CCDC84-205ENST00000528088 COG6Q9Y2V7 657 aa13.75□□□□□ -0.21
CCDC84-205ENST00000528088 LRRFIP2Q9Y608 721 aaKnown RBP13.75□□□□□ -0.21
CCDC84-205ENST00000528088 FECHP22830 423 aa13.74□□□□□ -0.21
CCDC84-205ENST00000528088 RRP1P56182 461 aaKnown RBP13.74□□□□□ -0.21
CCDC84-205ENST00000528088 RPS8P62241 208 aaKnown RBP13.74□□□□□ -0.21
CCDC84-205ENST00000528088 AOC3Q16853 763 aa13.74□□□□□ -0.21
CCDC84-205ENST00000528088 TMC4Q7Z404 712 aa13.74□□□□□ -0.21
CCDC84-205ENST00000528088 SP8Q8IXZ3 490 aa13.74□□□□□ -0.21
CCDC84-205ENST00000528088 JDP2Q8WYK2 163 aa13.74□□□□□ -0.21
CCDC84-205ENST00000528088 MPHOSPH8Q99549 860 aa13.74□□□□□ -0.21
CCDC84-205ENST00000528088 TAF1DQ9H5J8 278 aaPredicted RBP13.74□□□□□ -0.21
CCDC84-205ENST00000528088 PPIP5K2O43314 1243 aa13.74□□□□□ -0.21
CCDC84-205ENST00000528088 GNAI2P04899 355 aa13.74□□□□□ -0.21
CCDC84-205ENST00000528088 COLQQ9Y215 455 aaPredicted RBP13.74□□□□□ -0.21
CCDC84-205ENST00000528088 RTL9Q8NET4 1388 aa13.73□□□□□ -0.21
CCDC84-205ENST00000528088 CSF1RP07333 972 aa13.73□□□□□ -0.21
CCDC84-205ENST00000528088 MVPQ14764 893 aaKnown RBP13.73□□□□□ -0.21
CCDC84-205ENST00000528088 GRIPAP1Q4V328 841 aa13.73□□□□□ -0.21
CCDC84-205ENST00000528088 MPNDQ8N594 471 aa13.73□□□□□ -0.21
CCDC84-205ENST00000528088 RTFDC1Q9BY42 306 aaPredicted RBP13.73□□□□□ -0.21
CCDC84-205ENST00000528088 DDX19BQ9UMR2 479 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms