RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 C16orf71Q8IYS4 520 aaPredicted RBP24.67■■□□□ 1.54
EXOSC4-202ENST00000525936 GPRC5DQ9NZD1 345 aa24.67■■□□□ 1.54
EXOSC4-202ENST00000525936 G3V3G9 751 aa24.66■■□□□ 1.54
EXOSC4-202ENST00000525936 SRGAP3O43295 1099 aa24.66■■□□□ 1.54
EXOSC4-202ENST00000525936 EPHX2P34913 555 aa24.66■■□□□ 1.54
EXOSC4-202ENST00000525936 EPS15P42566 896 aa24.66■■□□□ 1.54
EXOSC4-202ENST00000525936 GMPSP49915 693 aaPredicted RBP24.66■■□□□ 1.54
EXOSC4-202ENST00000525936 PDE3AQ14432 1141 aa24.66■■□□□ 1.54
EXOSC4-202ENST00000525936 DCAF8Q5TAQ9 597 aa24.66■■□□□ 1.54
EXOSC4-202ENST00000525936 DPF2Q92785 391 aa24.66■■□□□ 1.54
EXOSC4-202ENST00000525936 MVPQ14764 893 aaKnown RBP24.65■■□□□ 1.54
EXOSC4-202ENST00000525936 METTL24Q5JXM2 366 aa24.65■■□□□ 1.54
EXOSC4-202ENST00000525936 ZNF609O15014 1411 aa24.64■■□□□ 1.54
EXOSC4-202ENST00000525936 PSME4Q14997 1843 aa24.64■■□□□ 1.54
EXOSC4-202ENST00000525936 CD209Q9NNX6 404 aa24.64■■□□□ 1.54
EXOSC4-202ENST00000525936 PA2G4Q9UQ80 394 aaKnown RBP24.64■■□□□ 1.54
EXOSC4-202ENST00000525936 ZBTB12Q9Y330 459 aaPredicted RBP24.64■■□□□ 1.54
EXOSC4-202ENST00000525936 PNMA6EA0A0J9YXQ4 647 aa24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 USP17L3A6NCW0 530 aa24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 USP17L4A6NCW7 530 aa24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 POTEIP0CG38 1075 aa24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 POTEJP0CG39 1038 aa24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 FGFR2P21802 821 aa24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 RPS12P25398 132 aaKnown RBP24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 LMOD1P29536 600 aaPredicted RBP24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 ATP8B2P98198 1209 aa24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 FSTL1Q12841 308 aa24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 C20orf194Q5TEA3 1177 aa24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 USP17L1Q7RTZ2 530 aa24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 PNMA8AQ86V59 439 aaPredicted RBP24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 GMLQ99445 158 aa24.63■■□□□ 1.53
EXOSC4-202ENST00000525936 IL1R1P14778 569 aa24.62■■□□□ 1.53
EXOSC4-202ENST00000525936 IL15P40933 162 aaPredicted RBP24.62■■□□□ 1.53
EXOSC4-202ENST00000525936 POLA2Q14181 598 aa24.62■■□□□ 1.53
EXOSC4-202ENST00000525936 FAM84BQ96KN1 310 aaPredicted RBP24.62■■□□□ 1.53
EXOSC4-202ENST00000525936 COG6Q9Y2V7 657 aa24.62■■□□□ 1.53
EXOSC4-202ENST00000525936 DACT2Q5SW24 774 aa24.61■■□□□ 1.53
EXOSC4-202ENST00000525936 STRIP1Q5VSL9 837 aa24.61■■□□□ 1.53
EXOSC4-202ENST00000525936 RSBN1LQ6PCB5 846 aaPredicted RBP24.61■■□□□ 1.53
EXOSC4-202ENST00000525936 SMC1BQ8NDV3 1235 aa24.61■■□□□ 1.53
EXOSC4-202ENST00000525936 SSH3Q8TE77 659 aa24.61■■□□□ 1.53
EXOSC4-202ENST00000525936 SIL1Q9H173 461 aa24.61■■□□□ 1.53
EXOSC4-202ENST00000525936 CNOT7Q9UIV1 285 aaKnown RBP24.61■■□□□ 1.53
EXOSC4-202ENST00000525936 DDX19BQ9UMR2 479 aa24.61■■□□□ 1.53
EXOSC4-202ENST00000525936 ADAMTSL1Q8N6G6 1762 aa24.61■■□□□ 1.53
EXOSC4-202ENST00000525936 ZNF646O15015 1829 aaPredicted RBP24.61■■□□□ 1.53
EXOSC4-202ENST00000525936 USP50Q70EL3 339 aaPredicted RBP24.6■■□□□ 1.53
EXOSC4-202ENST00000525936 FBXO33Q7Z6M2 555 aa24.6■■□□□ 1.53
EXOSC4-202ENST00000525936 LDHDQ86WU2 507 aa24.6■■□□□ 1.53
EXOSC4-202ENST00000525936 AGBL3Q8NEM8 1001 aa24.6■■□□□ 1.53
EXOSC4-202ENST00000525936 C1orf115Q9H7X2 142 aa24.6■■□□□ 1.53
EXOSC4-202ENST00000525936 ADARB2Q9NS39 739 aaKnown RBP24.6■■□□□ 1.53
EXOSC4-202ENST00000525936 ZBTB40Q9NUA8 1239 aa24.6■■□□□ 1.53
EXOSC4-202ENST00000525936 PUM3Q15397 648 aaKnown RBP24.59■■□□□ 1.53
EXOSC4-202ENST00000525936 ZNF804AQ7Z570 1209 aa24.59■■□□□ 1.53
EXOSC4-202ENST00000525936 SHTN1A0MZ66 631 aa24.58■■□□□ 1.53
EXOSC4-202ENST00000525936 CHADLQ6NUI6 762 aa24.58■■□□□ 1.53
EXOSC4-202ENST00000525936 TDRD7Q8NHU6 1098 aaKnown RBP24.58■■□□□ 1.53
EXOSC4-202ENST00000525936 CEP126Q9P2H0 1117 aa24.58■■□□□ 1.53
EXOSC4-202ENST00000525936 SASH1O94885 1247 aa24.57■■□□□ 1.52
EXOSC4-202ENST00000525936 HIBADHP31937 336 aaKnown RBP24.57■■□□□ 1.52
EXOSC4-202ENST00000525936 GYG1P46976 350 aa24.57■■□□□ 1.52
EXOSC4-202ENST00000525936 TTLL5Q6EMB2 1281 aa24.57■■□□□ 1.52
EXOSC4-202ENST00000525936 MICALL2Q8IY33 904 aa24.57■■□□□ 1.52
EXOSC4-202ENST00000525936 LPIN2Q92539 896 aa24.57■■□□□ 1.52
EXOSC4-202ENST00000525936 H7C1D1 291 aa24.56■■□□□ 1.52
EXOSC4-202ENST00000525936 HIRAP54198 1017 aaPredicted RBP24.56■■□□□ 1.52
EXOSC4-202ENST00000525936 ZNF280AP59817 542 aaPredicted RBP24.56■■□□□ 1.52
EXOSC4-202ENST00000525936 EAPPQ56P03 285 aaPredicted RBP24.56■■□□□ 1.52
EXOSC4-202ENST00000525936 CEP85Q6P2H3 762 aa24.56■■□□□ 1.52
EXOSC4-202ENST00000525936 GTF2IP78347 998 aa24.55■■□□□ 1.52
EXOSC4-202ENST00000525936 CHMP4BQ9H444 224 aaKnown RBP24.55■■□□□ 1.52
EXOSC4-202ENST00000525936 PGAP2Q9UHJ9 254 aa24.55■■□□□ 1.52
EXOSC4-202ENST00000525936 IFIT1P09914 478 aaKnown RBP24.54■■□□□ 1.52
EXOSC4-202ENST00000525936 MXD3Q9BW11 206 aa24.54■■□□□ 1.52
EXOSC4-202ENST00000525936 NOP58Q9Y2X3 529 aaKnown RBP24.54■■□□□ 1.52
EXOSC4-202ENST00000525936 FAM205AQ6ZU69 1335 aa24.54■■□□□ 1.52
EXOSC4-202ENST00000525936 MYO3BQ8WXR4 1341 aa24.54■■□□□ 1.52
EXOSC4-202ENST00000525936 ITGBL1O95965 494 aaPredicted RBP24.53■■□□□ 1.52
EXOSC4-202ENST00000525936 RRP1P56182 461 aaKnown RBP24.53■■□□□ 1.52
EXOSC4-202ENST00000525936 FKBP1AP62942 108 aaKnown RBP24.53■■□□□ 1.52
EXOSC4-202ENST00000525936 TRPM4Q8TD43 1214 aa24.53■■□□□ 1.52
EXOSC4-202ENST00000525936 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.53■■□□□ 1.52
EXOSC4-202ENST00000525936 CEP350Q5VT06 3117 aa24.53■■□□□ 1.52
EXOSC4-202ENST00000525936 EGFRP00533 1210 aa24.52■■□□□ 1.52
EXOSC4-202ENST00000525936 USP17L8P0C7I0 530 aa24.52■■□□□ 1.52
EXOSC4-202ENST00000525936 SLC5A1P13866 664 aa24.52■■□□□ 1.52
EXOSC4-202ENST00000525936 HSPA6P17066 643 aa24.52■■□□□ 1.52
EXOSC4-202ENST00000525936 BCAMP50895 628 aa24.52■■□□□ 1.52
EXOSC4-202ENST00000525936 TFCP2Q12800 502 aa24.52■■□□□ 1.52
EXOSC4-202ENST00000525936 ATP2B3Q16720 1220 aa24.52■■□□□ 1.52
EXOSC4-202ENST00000525936 CAVIN4Q5BKX8 364 aa24.52■■□□□ 1.52
EXOSC4-202ENST00000525936 SAMD7Q7Z3H4 446 aa24.52■■□□□ 1.52
EXOSC4-202ENST00000525936 CERS5Q8N5B7 392 aa24.52■■□□□ 1.52
EXOSC4-202ENST00000525936 ZC3H15Q8WU90 426 aaKnown RBP24.52■■□□□ 1.52
EXOSC4-202ENST00000525936 ZBTB22O15209 634 aa24.51■■□□□ 1.51
EXOSC4-202ENST00000525936 MMP14P50281 582 aa24.51■■□□□ 1.51
EXOSC4-202ENST00000525936 G3BP1Q13283 466 aaKnown RBP eCLIP24.51■■□□□ 1.51
EXOSC4-202ENST00000525936 RPAP2Q8IXW5 612 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms