RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 FAM227BQ96M60 508 aa26.76■■□□□ 1.87
NKX6-3-202ENST00000524115 RBSNQ9H1K0 784 aa26.76■■□□□ 1.87
NKX6-3-202ENST00000524115 C10orf71Q711Q0 1435 aa26.76■■□□□ 1.87
NKX6-3-202ENST00000524115 USP48Q86UV5 1035 aa26.76■■□□□ 1.87
NKX6-3-202ENST00000524115 TLR7Q9NYK1 1049 aaKnown RBP26.76■■□□□ 1.87
NKX6-3-202ENST00000524115 RBM27Q9P2N5 1060 aaKnown RBP26.76■■□□□ 1.87
NKX6-3-202ENST00000524115 TBC1D2BQ9UPU7 963 aa26.76■■□□□ 1.87
NKX6-3-202ENST00000524115 A0A0G2JLW4 131 aa26.75■■□□□ 1.87
NKX6-3-202ENST00000524115 FAM184AQ8NB25 1140 aa26.75■■□□□ 1.87
NKX6-3-202ENST00000524115 CWC25Q9NXE8 425 aaPredicted RBP26.75■■□□□ 1.87
NKX6-3-202ENST00000524115 PIP4K2AP48426 406 aaPredicted RBP26.74■■□□□ 1.87
NKX6-3-202ENST00000524115 UBE2HP62256 183 aa26.74■■□□□ 1.87
NKX6-3-202ENST00000524115 TSPY26PQ9H489 355 aa26.74■■□□□ 1.87
NKX6-3-202ENST00000524115 U3KPZ7 1027 aaPredicted RBP26.74■■□□□ 1.87
NKX6-3-202ENST00000524115 SYCE3A1L190 88 aa26.73■■□□□ 1.87
NKX6-3-202ENST00000524115 TFCP2Q12800 502 aa26.73■■□□□ 1.87
NKX6-3-202ENST00000524115 ADCK5Q3MIX3 580 aa26.73■■□□□ 1.87
NKX6-3-202ENST00000524115 CCDC191Q8NCU4 936 aa26.73■■□□□ 1.87
NKX6-3-202ENST00000524115 PDLIM2Q96JY6 352 aa26.73■■□□□ 1.87
NKX6-3-202ENST00000524115 HAUS7Q99871 368 aa26.73■■□□□ 1.87
NKX6-3-202ENST00000524115 A0A0D9SFI3 127 aa26.73■■□□□ 1.87
NKX6-3-202ENST00000524115 GJB2P29033 226 aa26.73■■□□□ 1.87
NKX6-3-202ENST00000524115 ZSCAN30Q86W11 494 aa26.73■■□□□ 1.87
NKX6-3-202ENST00000524115 CCDC83Q8IWF9 413 aa26.73■■□□□ 1.87
NKX6-3-202ENST00000524115 DBNLQ9UJU6 430 aaKnown RBP26.73■■□□□ 1.87
NKX6-3-202ENST00000524115 DPEP1P16444 411 aa26.72■■□□□ 1.87
NKX6-3-202ENST00000524115 RPS6KB1P23443 525 aa26.72■■□□□ 1.87
NKX6-3-202ENST00000524115 IL15P40933 162 aaPredicted RBP26.71■■□□□ 1.87
NKX6-3-202ENST00000524115 CCDC183Q5T5S1 534 aa26.71■■□□□ 1.87
NKX6-3-202ENST00000524115 KLHDC4Q8TBB5 520 aa26.71■■□□□ 1.87
NKX6-3-202ENST00000524115 TAF5LO75529 589 aa26.7■■□□□ 1.87
NKX6-3-202ENST00000524115 UVSSAQ2YD98 709 aa26.7■■□□□ 1.87
NKX6-3-202ENST00000524115 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.7■■□□□ 1.87
NKX6-3-202ENST00000524115 NBPF26B4DH59 902 aa26.7■■□□□ 1.86
NKX6-3-202ENST00000524115 NBPF10Q6P3W6 841 aaKnown RBP26.7■■□□□ 1.86
NKX6-3-202ENST00000524115 BICDL1Q6ZP65 573 aa26.7■■□□□ 1.86
NKX6-3-202ENST00000524115 NBPF15Q8N660 670 aa26.7■■□□□ 1.86
NKX6-3-202ENST00000524115 FBXO3Q9UK99 471 aa26.7■■□□□ 1.86
NKX6-3-202ENST00000524115 ATP5J2-PTCD1G3V325 749 aa26.69■■□□□ 1.86
NKX6-3-202ENST00000524115 CIAO1O76071 339 aa26.69■■□□□ 1.86
NKX6-3-202ENST00000524115 CAMTA2O94983 1202 aa26.69■■□□□ 1.86
NKX6-3-202ENST00000524115 SERPINB2P05120 415 aa26.69■■□□□ 1.86
NKX6-3-202ENST00000524115 TBC1D9BQ66K14 1250 aa26.69■■□□□ 1.86
NKX6-3-202ENST00000524115 LMBR1LQ6UX01 489 aa26.69■■□□□ 1.86
NKX6-3-202ENST00000524115 DZIP3Q86Y13 1208 aaKnown RBP26.69■■□□□ 1.86
NKX6-3-202ENST00000524115 NSFL1CQ9UNZ2 370 aaKnown RBP26.69■■□□□ 1.86
NKX6-3-202ENST00000524115 KCNA3P22001 575 aa26.68■■□□□ 1.86
NKX6-3-202ENST00000524115 FOXO4P98177 505 aa26.68■■□□□ 1.86
NKX6-3-202ENST00000524115 ME3Q16798 604 aa26.68■■□□□ 1.86
NKX6-3-202ENST00000524115 MCMDC2Q4G0Z9 681 aa26.68■■□□□ 1.86
NKX6-3-202ENST00000524115 MTMR6Q9Y217 621 aa26.68■■□□□ 1.86
NKX6-3-202ENST00000524115 MCM5P33992 734 aa26.67■■□□□ 1.86
NKX6-3-202ENST00000524115 SH3TC1Q8TE82 1336 aa26.67■■□□□ 1.86
NKX6-3-202ENST00000524115 HMGB1P09429 215 aaKnown RBP26.66■■□□□ 1.86
NKX6-3-202ENST00000524115 CPA1P15085 419 aa26.66■■□□□ 1.86
NKX6-3-202ENST00000524115 LRRFIP1Q32MZ4 808 aaKnown RBP26.66■■□□□ 1.86
NKX6-3-202ENST00000524115 KBTBD3Q8NAB2 608 aa26.66■■□□□ 1.86
NKX6-3-202ENST00000524115 ZNF784Q8NCA9 323 aaPredicted RBP26.66■■□□□ 1.86
NKX6-3-202ENST00000524115 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.66■■□□□ 1.86
NKX6-3-202ENST00000524115 CHMP4CQ96CF2 233 aa26.66■■□□□ 1.86
NKX6-3-202ENST00000524115 HELLSQ9NRZ9 838 aa26.66■■□□□ 1.86
NKX6-3-202ENST00000524115 LARGE1O95461 756 aa26.66■■□□□ 1.86
NKX6-3-202ENST00000524115 MSNP26038 577 aaKnown RBP26.66■■□□□ 1.86
NKX6-3-202ENST00000524115 BCS1LQ9Y276 419 aa26.66■■□□□ 1.86
NKX6-3-202ENST00000524115 CHAMP1Q96JM3 812 aa26.65■■□□□ 1.86
NKX6-3-202ENST00000524115 TPCN1Q9ULQ1 816 aa26.65■■□□□ 1.86
NKX6-3-202ENST00000524115 CNPY2Q9Y2B0 182 aa26.65■■□□□ 1.86
NKX6-3-202ENST00000524115 DBNDD2Q9BQY9 259 aa26.64■■□□□ 1.86
NKX6-3-202ENST00000524115 CHRNA5P30532 468 aa26.63■■□□□ 1.85
NKX6-3-202ENST00000524115 LARP1BQ659C4 914 aaKnown RBP26.63■■□□□ 1.85
NKX6-3-202ENST00000524115 CCDC39Q9UFE4 941 aa26.63■■□□□ 1.85
NKX6-3-202ENST00000524115 SPEF2Q9C093 1822 aa26.63■■□□□ 1.85
NKX6-3-202ENST00000524115 EYA2O00167 538 aa26.63■■□□□ 1.85
NKX6-3-202ENST00000524115 GADD45BO75293 160 aaPredicted RBP26.63■■□□□ 1.85
NKX6-3-202ENST00000524115 TRIM28Q13263 835 aaKnown RBP26.63■■□□□ 1.85
NKX6-3-202ENST00000524115 NEK1Q96PY6 1258 aa26.63■■□□□ 1.85
NKX6-3-202ENST00000524115 PIM2Q9P1W9 311 aa26.63■■□□□ 1.85
NKX6-3-202ENST00000524115 ZNF589Q86UQ0 364 aaPredicted RBP26.62■■□□□ 1.85
NKX6-3-202ENST00000524115 SETDB2Q96T68 719 aa26.62■■□□□ 1.85
NKX6-3-202ENST00000524115 KIF13BQ9NQT8 1826 aa26.62■■□□□ 1.85
NKX6-3-202ENST00000524115 KRT85P78386 507 aa26.61■■□□□ 1.85
NKX6-3-202ENST00000524115 CLEC4GQ6UXB4 293 aa26.61■■□□□ 1.85
NKX6-3-202ENST00000524115 DNAJC2Q99543 621 aaKnown RBP26.61■■□□□ 1.85
NKX6-3-202ENST00000524115 CHMP3Q9Y3E7 222 aa26.61■■□□□ 1.85
NKX6-3-202ENST00000524115 ELP1O95163 1332 aa26.61■■□□□ 1.85
NKX6-3-202ENST00000524115 ATG9AQ7Z3C6 839 aa26.6■■□□□ 1.85
NKX6-3-202ENST00000524115 LARP6Q9BRS8 491 aaKnown RBP26.6■■□□□ 1.85
NKX6-3-202ENST00000524115 DSCC1Q9BVC3 393 aa26.6■■□□□ 1.85
NKX6-3-202ENST00000524115 TTLL7Q6ZT98 887 aa26.6■■□□□ 1.85
NKX6-3-202ENST00000524115 ISCA1Q9BUE6 129 aa26.6■■□□□ 1.85
NKX6-3-202ENST00000524115 GDPD2Q9HCC8 539 aa26.6■■□□□ 1.85
NKX6-3-202ENST00000524115 NOL7Q9UMY1 257 aaKnown RBP26.6■■□□□ 1.85
NKX6-3-202ENST00000524115 ZNF609O15014 1411 aa26.59■■□□□ 1.85
NKX6-3-202ENST00000524115 VPS37CA5D8V6 355 aaPredicted RBP26.59■■□□□ 1.85
NKX6-3-202ENST00000524115 ST3GAL1Q11201 340 aa26.59■■□□□ 1.85
NKX6-3-202ENST00000524115 JARID2Q92833 1246 aaPredicted RBP26.59■■□□□ 1.85
NKX6-3-202ENST00000524115 PAG1Q9NWQ8 432 aa26.59■■□□□ 1.85
NKX6-3-202ENST00000524115 AKAP2Q9Y2D5 859 aa26.59■■□□□ 1.85
NKX6-3-202ENST00000524115 CARMIL3Q8ND23 1372 aa26.58■■□□□ 1.85
NKX6-3-202ENST00000524115 TOB2Q14106 344 aaPredicted RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms