RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 TIMM44O43615 452 aa8.93□□□□□ -0.98
HDAC3-216ENST00000523088 RPS6KA4O75676 772 aa8.93□□□□□ -0.98
HDAC3-216ENST00000523088 RFC4P35249 363 aa8.93□□□□□ -0.98
HDAC3-216ENST00000523088 FOSBP53539 338 aa8.93□□□□□ -0.98
HDAC3-216ENST00000523088 GSCP56915 257 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-216ENST00000523088 BIRC2Q13490 618 aa8.93□□□□□ -0.98
HDAC3-216ENST00000523088 ITPK1Q13572 414 aa8.93□□□□□ -0.98
HDAC3-216ENST00000523088 CCDC91Q7Z6B0 441 aa8.93□□□□□ -0.98
HDAC3-216ENST00000523088 IFNLR1Q8IU57 520 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-216ENST00000523088 IQCF2Q8IXL9 164 aa8.93□□□□□ -0.98
HDAC3-216ENST00000523088 ZNF396Q96N95 335 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-216ENST00000523088 TACO1Q9BSH4 297 aaKnown RBP8.93□□□□□ -0.98
HDAC3-216ENST00000523088 KLHL42Q9P2K6 505 aa8.93□□□□□ -0.98
HDAC3-216ENST00000523088 SIPA1L3O60292 1781 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-216ENST00000523088 ECM2O94769 699 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-216ENST00000523088 NFKBIBQ15653 356 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 ZSCAN26Q16670 478 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 TSNAXIP1Q2TAA8 658 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 MSL1Q68DK7 614 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 ZNF662Q6ZS27 426 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 C11orf96Q7Z7L8 435 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 MIGA1Q8NAN2 632 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 NFATC2IPQ8NCF5 419 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 PIK3R5Q8WYR1 880 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 RSPH1Q8WYR4 309 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 BHMTQ93088 406 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 IFT122Q9HBG6 1241 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 SUFUQ9UMX1 484 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 STK24Q9Y6E0 443 aa8.92□□□□□ -0.98
HDAC3-216ENST00000523088 HMOX1P09601 288 aa8.91□□□□□ -0.98
HDAC3-216ENST00000523088 NBPF7P0C2Y1 421 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-216ENST00000523088 SKILP12757 684 aa8.91□□□□□ -0.98
HDAC3-216ENST00000523088 KCNA2P16389 499 aa8.91□□□□□ -0.98
HDAC3-216ENST00000523088 PSMD2Q13200 908 aa8.91□□□□□ -0.98
HDAC3-216ENST00000523088 DCTN1Q14203 1278 aa8.91□□□□□ -0.98
HDAC3-216ENST00000523088 MCM6Q14566 821 aa8.91□□□□□ -0.98
HDAC3-216ENST00000523088 FAM184AQ8NB25 1140 aa8.91□□□□□ -0.98
HDAC3-216ENST00000523088 IQCGQ9H095 443 aaKnown RBP8.91□□□□□ -0.98
HDAC3-216ENST00000523088 CXorf56Q9H5V9 222 aa8.91□□□□□ -0.98
HDAC3-216ENST00000523088 CCDC87Q9NVE4 849 aa8.91□□□□□ -0.98
HDAC3-216ENST00000523088 CWC15Q9P013 229 aaKnown RBP8.91□□□□□ -0.98
HDAC3-216ENST00000523088 TBC1D2BQ9UPU7 963 aa8.91□□□□□ -0.98
HDAC3-216ENST00000523088 BRCA1P38398 1863 aaKnown RBP8.91□□□□□ -0.98
HDAC3-216ENST00000523088 ARFGEF1Q9Y6D6 1849 aa8.9□□□□□ -0.98
HDAC3-216ENST00000523088 RBM47A0AV96 593 aaKnown RBP8.9□□□□□ -0.98
HDAC3-216ENST00000523088 GNAT3A8MTJ3 354 aa8.9□□□□□ -0.98
HDAC3-216ENST00000523088 RNMTO43148 476 aaKnown RBP8.9□□□□□ -0.98
HDAC3-216ENST00000523088 PTCD1O75127 700 aaKnown RBP8.9□□□□□ -0.98
HDAC3-216ENST00000523088 CCDC175P0C221 793 aa8.9□□□□□ -0.98
HDAC3-216ENST00000523088 TGFB2P61812 414 aa8.9□□□□□ -0.98
HDAC3-216ENST00000523088 IRX1P78414 480 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-216ENST00000523088 TEFQ10587 303 aa8.9□□□□□ -0.98
HDAC3-216ENST00000523088 TMED1Q13445 227 aa8.9□□□□□ -0.98
HDAC3-216ENST00000523088 PPP4R3CPQ6ZMV5 832 aa8.9□□□□□ -0.98
HDAC3-216ENST00000523088 CCAR1Q8IX12 1150 aaKnown RBP8.9□□□□□ -0.98
HDAC3-216ENST00000523088 TTC5Q8N0Z6 440 aa8.9□□□□□ -0.98
HDAC3-216ENST00000523088 GOLGA6L1Q8N7Z2 621 aa8.9□□□□□ -0.98
HDAC3-216ENST00000523088 C1orf131Q8NDD1 294 aaKnown RBP8.9□□□□□ -0.98
HDAC3-216ENST00000523088 VPS37AQ8NEZ2 397 aa8.9□□□□□ -0.98
HDAC3-216ENST00000523088 NLGN2Q8NFZ4 835 aa8.9□□□□□ -0.98
HDAC3-216ENST00000523088 SMCR8Q8TEV9 937 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-216ENST00000523088 SYAP1Q96A49 352 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-216ENST00000523088 RMDN2Q96LZ7 410 aa8.9□□□□□ -0.98
HDAC3-216ENST00000523088 MMTAG2Q9BU76 263 aaKnown RBP8.9□□□□□ -0.98
HDAC3-216ENST00000523088 INO80BQ9C086 356 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-216ENST00000523088 DEF6Q9H4E7 631 aa8.9□□□□□ -0.98
HDAC3-216ENST00000523088 KCPQ6ZWJ8 1503 aa8.9□□□□□ -0.99
HDAC3-216ENST00000523088 C10orf71Q711Q0 1435 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 USP42Q9H9J4 1324 aaKnown RBP8.89□□□□□ -0.99
HDAC3-216ENST00000523088 FSD2A1L4K1 749 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 GOLGA6L22H0YM25 854 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 TPPPO94811 219 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 PARNO95453 639 aaKnown RBP8.89□□□□□ -0.99
HDAC3-216ENST00000523088 STARD3NLO95772 234 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 MMP10P09238 476 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 CRKLP46109 303 aaKnown RBP8.89□□□□□ -0.99
HDAC3-216ENST00000523088 TRAF1Q13077 416 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 MTHFSDQ2M296 383 aaKnown RBP8.89□□□□□ -0.99
HDAC3-216ENST00000523088 SOGA3Q5TF21 947 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 GIMAP6Q6P9H5 292 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 C16orf87Q6PH81 154 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 PDILTQ8N807 584 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 ZNF784Q8NCA9 323 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-216ENST00000523088 C17orf50Q8WW18 174 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 TEKT1Q969V4 418 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 SEZ6LQ9BYH1 1024 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 FAN1Q9Y2M0 1017 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 PARP3Q9Y6F1 533 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 SCINQ9Y6U3 715 aa8.89□□□□□ -0.99
HDAC3-216ENST00000523088 KIAA1551Q9HCM1 1747 aa8.88□□□□□ -0.99
HDAC3-216ENST00000523088 GOLGA6L6A8MZA4 724 aa8.88□□□□□ -0.99
HDAC3-216ENST00000523088 ZPR1O75312 459 aa8.88□□□□□ -0.99
HDAC3-216ENST00000523088 FCHSD2O94868 740 aa8.88□□□□□ -0.99
HDAC3-216ENST00000523088 ATICP31939 592 aa8.88□□□□□ -0.99
HDAC3-216ENST00000523088 COL19A1Q14993 1142 aa8.88□□□□□ -0.99
HDAC3-216ENST00000523088 ZSCAN30Q86W11 494 aa8.88□□□□□ -0.99
HDAC3-216ENST00000523088 SLC4A9Q96Q91 983 aa8.88□□□□□ -0.99
HDAC3-216ENST00000523088 SLX1AQ9BQ83 275 aa8.88□□□□□ -0.99
HDAC3-216ENST00000523088 NOL10Q9BSC4 688 aaKnown RBP8.88□□□□□ -0.99
HDAC3-216ENST00000523088 CTDP1Q9Y5B0 961 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms