RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 MICALL2Q8IY33 904 aa20.53■□□□□ 0.88
PABPC1-221ENST00000522720 CLUAP1Q96AJ1 413 aa20.53■□□□□ 0.88
PABPC1-221ENST00000522720 IRS2Q9Y4H2 1338 aa20.53■□□□□ 0.88
PABPC1-221ENST00000522720 USP17L3A6NCW0 530 aa20.52■□□□□ 0.88
PABPC1-221ENST00000522720 USP17L4A6NCW7 530 aa20.52■□□□□ 0.88
PABPC1-221ENST00000522720 ITGBL1O95965 494 aaPredicted RBP20.52■□□□□ 0.88
PABPC1-221ENST00000522720 GNAI3P08754 354 aa20.52■□□□□ 0.88
PABPC1-221ENST00000522720 USP17L1Q7RTZ2 530 aa20.52■□□□□ 0.88
PABPC1-221ENST00000522720 MROH5Q6ZUA9 1318 aa20.52■□□□□ 0.87
PABPC1-221ENST00000522720 SHTN1A0MZ66 631 aa20.51■□□□□ 0.87
PABPC1-221ENST00000522720 RFX5P48382 616 aaPredicted RBP20.51■□□□□ 0.87
PABPC1-221ENST00000522720 LRRC24Q50LG9 513 aa20.51■□□□□ 0.87
PABPC1-221ENST00000522720 MAP1SQ66K74 1059 aaPredicted RBP20.51■□□□□ 0.87
PABPC1-221ENST00000522720 RSBN1LQ6PCB5 846 aaPredicted RBP20.51■□□□□ 0.87
PABPC1-221ENST00000522720 CNTROBQ8N137 903 aa20.51■□□□□ 0.87
PABPC1-221ENST00000522720 AGBL3Q8NEM8 1001 aa20.51■□□□□ 0.87
PABPC1-221ENST00000522720 KLHDC4Q8TBB5 520 aa20.51■□□□□ 0.87
PABPC1-221ENST00000522720 LRRFIP2Q9Y608 721 aaKnown RBP20.51■□□□□ 0.87
PABPC1-221ENST00000522720 HIRAP54198 1017 aaPredicted RBP20.5■□□□□ 0.87
PABPC1-221ENST00000522720 UBE4AQ14139 1066 aa20.5■□□□□ 0.87
PABPC1-221ENST00000522720 GMLQ99445 158 aa20.5■□□□□ 0.87
PABPC1-221ENST00000522720 ZNF609O15014 1411 aa20.5■□□□□ 0.87
PABPC1-221ENST00000522720 PASKQ96RG2 1323 aa20.5■□□□□ 0.87
PABPC1-221ENST00000522720 HTRA3P83110 453 aa20.49■□□□□ 0.87
PABPC1-221ENST00000522720 PTPN12Q05209 780 aaKnown RBP20.49■□□□□ 0.87
PABPC1-221ENST00000522720 STRIP1Q5VSL9 837 aa20.49■□□□□ 0.87
PABPC1-221ENST00000522720 TRPM4Q8TD43 1214 aa20.49■□□□□ 0.87
PABPC1-221ENST00000522720 ZC3H15Q8WU90 426 aaKnown RBP20.49■□□□□ 0.87
PABPC1-221ENST00000522720 CD209Q9NNX6 404 aa20.49■□□□□ 0.87
PABPC1-221ENST00000522720 PGAP2Q9UHJ9 254 aa20.49■□□□□ 0.87
PABPC1-221ENST00000522720 DACT2Q5SW24 774 aa20.48■□□□□ 0.87
PABPC1-221ENST00000522720 SAMD7Q7Z3H4 446 aa20.48■□□□□ 0.87
PABPC1-221ENST00000522720 TMEM57Q8N5G2 664 aa20.48■□□□□ 0.87
PABPC1-221ENST00000522720 DNAJC5GQ8N7S2 189 aa20.48■□□□□ 0.87
PABPC1-221ENST00000522720 EYA2O00167 538 aa20.47■□□□□ 0.87
PABPC1-221ENST00000522720 ZNF280AP59817 542 aaPredicted RBP20.47■□□□□ 0.87
PABPC1-221ENST00000522720 METTL24Q5JXM2 366 aa20.47■□□□□ 0.87
PABPC1-221ENST00000522720 TTLL5Q6EMB2 1281 aa20.47■□□□□ 0.87
PABPC1-221ENST00000522720 ZNF804AQ7Z570 1209 aa20.47■□□□□ 0.87
PABPC1-221ENST00000522720 VGLL2Q8N8G2 317 aa20.47■□□□□ 0.87
PABPC1-221ENST00000522720 PDE8BO95263 885 aa20.46■□□□□ 0.87
PABPC1-221ENST00000522720 EGFRP00533 1210 aa20.46■□□□□ 0.87
PABPC1-221ENST00000522720 IL1R1P14778 569 aa20.46■□□□□ 0.87
PABPC1-221ENST00000522720 TBC1D10BQ4KMP7 808 aaPredicted RBP20.46■□□□□ 0.87
PABPC1-221ENST00000522720 FTSJ3Q8IY81 847 aaKnown RBP20.46■□□□□ 0.87
PABPC1-221ENST00000522720 DZIP1LQ8IYY4 767 aaKnown RBP20.46■□□□□ 0.87
PABPC1-221ENST00000522720 FBXO3Q9UK99 471 aa20.46■□□□□ 0.87
PABPC1-221ENST00000522720 ZNF646O15015 1829 aaPredicted RBP20.46■□□□□ 0.87
PABPC1-221ENST00000522720 GNAI2P04899 355 aa20.45■□□□□ 0.86
PABPC1-221ENST00000522720 USP17L8P0C7I0 530 aa20.45■□□□□ 0.86
PABPC1-221ENST00000522720 GTF2IP78347 998 aa20.45■□□□□ 0.86
PABPC1-221ENST00000522720 FBXW7Q969H0 707 aa20.45■□□□□ 0.86
PABPC1-221ENST00000522720 MYO3BQ8WXR4 1341 aa20.45■□□□□ 0.86
PABPC1-221ENST00000522720 CIAO1O76071 339 aa20.44■□□□□ 0.86
PABPC1-221ENST00000522720 RLBP1P12271 317 aa20.44■□□□□ 0.86
PABPC1-221ENST00000522720 MTX1Q13505 466 aa20.44■□□□□ 0.86
PABPC1-221ENST00000522720 RBM26Q5T8P6 1007 aaKnown RBP20.44■□□□□ 0.86
PABPC1-221ENST00000522720 ATG9AQ7Z3C6 839 aa20.44■□□□□ 0.86
PABPC1-221ENST00000522720 FAM84BQ96KN1 310 aaPredicted RBP20.44■□□□□ 0.86
PABPC1-221ENST00000522720 MXD3Q9BW11 206 aa20.44■□□□□ 0.86
PABPC1-221ENST00000522720 CREBZFQ9NS37 354 aa20.44■□□□□ 0.86
PABPC1-221ENST00000522720 POLR2AP24928 1970 aaKnown RBP20.43■□□□□ 0.86
PABPC1-221ENST00000522720 KIF4BQ2VIQ3 1234 aa20.43■□□□□ 0.86
PABPC1-221ENST00000522720 COPRSQ9NQ92 184 aa20.43■□□□□ 0.86
PABPC1-221ENST00000522720 TMEM88BA6NKF7 163 aa20.42■□□□□ 0.86
PABPC1-221ENST00000522720 SRGAP3O43295 1099 aa20.42■□□□□ 0.86
PABPC1-221ENST00000522720 HIBADHP31937 336 aaKnown RBP20.42■□□□□ 0.86
PABPC1-221ENST00000522720 GYG1P46976 350 aa20.42■□□□□ 0.86
PABPC1-221ENST00000522720 MMP14P50281 582 aa20.42■□□□□ 0.86
PABPC1-221ENST00000522720 SIL1Q9H173 461 aa20.42■□□□□ 0.86
PABPC1-221ENST00000522720 RCAN3Q9UKA8 241 aa20.42■□□□□ 0.86
PABPC1-221ENST00000522720 TRAF5O00463 557 aa20.41■□□□□ 0.86
PABPC1-221ENST00000522720 SASH1O94885 1247 aa20.41■□□□□ 0.86
PABPC1-221ENST00000522720 FGFR2P21802 821 aa20.41■□□□□ 0.86
PABPC1-221ENST00000522720 PUM3Q15397 648 aaKnown RBP20.41■□□□□ 0.86
PABPC1-221ENST00000522720 CDC37L1Q7L3B6 337 aa20.41■□□□□ 0.86
PABPC1-221ENST00000522720 FBXO33Q7Z6M2 555 aa20.41■□□□□ 0.86
PABPC1-221ENST00000522720 OGFOD1Q8N543 542 aa20.41■□□□□ 0.86
PABPC1-221ENST00000522720 TDRD7Q8NHU6 1098 aaKnown RBP20.41■□□□□ 0.86
PABPC1-221ENST00000522720 MYOZ2Q9NPC6 264 aa20.41■□□□□ 0.86
PABPC1-221ENST00000522720 PA2G4Q9UQ80 394 aaKnown RBP20.41■□□□□ 0.86
PABPC1-221ENST00000522720 ZBTB7BO15156 539 aaPredicted RBP20.4■□□□□ 0.86
PABPC1-221ENST00000522720 IL15P40933 162 aaPredicted RBP20.4■□□□□ 0.86
PABPC1-221ENST00000522720 FMR1Q06787 632 aaKnown RBP eCLIP20.4■□□□□ 0.86
PABPC1-221ENST00000522720 ITPRIPQ8IWB1 547 aa20.4■□□□□ 0.86
PABPC1-221ENST00000522720 KLRG1Q96E93 195 aa20.4■□□□□ 0.86
PABPC1-221ENST00000522720 TRPM7Q96QT4 1865 aa20.39■□□□□ 0.86
PABPC1-221ENST00000522720 FAM205AQ6ZU69 1335 aa20.39■□□□□ 0.85
PABPC1-221ENST00000522720 IFIT1P09914 478 aaKnown RBP20.39■□□□□ 0.85
PABPC1-221ENST00000522720 MS4A1P11836 297 aa20.39■□□□□ 0.85
PABPC1-221ENST00000522720 FKBP1AP62942 108 aaKnown RBP20.39■□□□□ 0.85
PABPC1-221ENST00000522720 CAVIN4Q5BKX8 364 aa20.39■□□□□ 0.85
PABPC1-221ENST00000522720 GLIS2Q9BZE0 524 aaPredicted RBP20.39■□□□□ 0.85
PABPC1-221ENST00000522720 CEP126Q9P2H0 1117 aa20.39■□□□□ 0.85
PABPC1-221ENST00000522720 SCARF1Q14162 830 aa20.38■□□□□ 0.85
PABPC1-221ENST00000522720 USP48Q86UV5 1035 aa20.38■□□□□ 0.85
PABPC1-221ENST00000522720 VPS37DQ86XT2 251 aa20.38■□□□□ 0.85
PABPC1-221ENST00000522720 KIAA0825Q8IV33 1275 aa20.38■□□□□ 0.85
PABPC1-221ENST00000522720 CERS5Q8N5B7 392 aa20.38■□□□□ 0.85
PABPC1-221ENST00000522720 PANK1Q8TE04 598 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms