RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 LNPKQ9C0E8 428 aa29.72■■■□□ 2.35
PVT1-212ENST00000521951 GOLGB1Q14789 3259 aaKnown RBP29.72■■■□□ 2.35
PVT1-212ENST00000521951 IFIT1P09914 478 aaKnown RBP29.71■■■□□ 2.35
PVT1-212ENST00000521951 SUPT20HQ8NEM7 779 aa29.71■■■□□ 2.35
PVT1-212ENST00000521951 CCDC8Q9H0W5 538 aaPredicted RBP29.71■■■□□ 2.35
PVT1-212ENST00000521951 NFKBIEO00221 500 aa29.71■■■□□ 2.35
PVT1-212ENST00000521951 KLRK1P26718 216 aa29.71■■■□□ 2.35
PVT1-212ENST00000521951 GPR162Q16538 588 aa29.71■■■□□ 2.35
PVT1-212ENST00000521951 IRS2Q9Y4H2 1338 aa29.7■■■□□ 2.35
PVT1-212ENST00000521951 ADORA1P30542 326 aa29.7■■■□□ 2.34
PVT1-212ENST00000521951 ARHGAP27Q6ZUM4 889 aa29.7■■■□□ 2.34
PVT1-212ENST00000521951 TXNRD3Q86VQ6 643 aa29.7■■■□□ 2.34
PVT1-212ENST00000521951 C16orf71Q8IYS4 520 aaPredicted RBP29.7■■■□□ 2.34
PVT1-212ENST00000521951 XAGE2Q96GT9 111 aa29.7■■■□□ 2.34
PVT1-212ENST00000521951 C15orf52Q6ZUT6 534 aaKnown RBP29.69■■■□□ 2.34
PVT1-212ENST00000521951 EYA3Q99504 573 aa29.69■■■□□ 2.34
PVT1-212ENST00000521951 DBNDD2Q9BQY9 259 aa29.69■■■□□ 2.34
PVT1-212ENST00000521951 TLR7Q9NYK1 1049 aaKnown RBP29.69■■■□□ 2.34
PVT1-212ENST00000521951 ARAP2Q8WZ64 1704 aa29.69■■■□□ 2.34
PVT1-212ENST00000521951 IFIT2P09913 472 aaKnown RBP29.68■■■□□ 2.34
PVT1-212ENST00000521951 WASHC4Q2M389 1173 aa29.68■■■□□ 2.34
PVT1-212ENST00000521951 TAOK3Q9H2K8 898 aa29.68■■■□□ 2.34
PVT1-212ENST00000521951 DBNLQ9UJU6 430 aaKnown RBP29.68■■■□□ 2.34
PVT1-212ENST00000521951 MED23Q9ULK4 1368 aa29.68■■■□□ 2.34
PVT1-212ENST00000521951 RIMBP2O15034 1052 aa29.67■■■□□ 2.34
PVT1-212ENST00000521951 ZC3H12CQ9C0D7 883 aaKnown RBP29.67■■■□□ 2.34
PVT1-212ENST00000521951 LTBP3Q9NS15 1303 aa29.67■■■□□ 2.34
PVT1-212ENST00000521951 FAM84BQ96KN1 310 aaPredicted RBP29.66■■■□□ 2.34
PVT1-212ENST00000521951 GYG1P46976 350 aa29.66■■■□□ 2.34
PVT1-212ENST00000521951 RASSF7Q02833 373 aa29.66■■■□□ 2.34
PVT1-212ENST00000521951 OTUD7AQ8TE49 926 aaPredicted RBP29.66■■■□□ 2.34
PVT1-212ENST00000521951 ZNF277Q9NRM2 450 aaPredicted RBP29.66■■■□□ 2.34
PVT1-212ENST00000521951 BCAMP50895 628 aa29.64■■■□□ 2.34
PVT1-212ENST00000521951 KIAA2012Q0VF49 1180 aa29.64■■■□□ 2.34
PVT1-212ENST00000521951 GORABQ5T7V8 394 aa29.64■■■□□ 2.34
PVT1-212ENST00000521951 FBXO33Q7Z6M2 555 aa29.64■■■□□ 2.34
PVT1-212ENST00000521951 VPS33BQ9H267 617 aa29.64■■■□□ 2.34
PVT1-212ENST00000521951 AOC3Q16853 763 aa29.63■■■□□ 2.33
PVT1-212ENST00000521951 CAVIN4Q5BKX8 364 aa29.63■■■□□ 2.33
PVT1-212ENST00000521951 PPIP5K2O43314 1243 aa29.62■■■□□ 2.33
PVT1-212ENST00000521951 GRIN3BO60391 1043 aa29.62■■■□□ 2.33
PVT1-212ENST00000521951 PDE4AP27815 886 aa29.62■■■□□ 2.33
PVT1-212ENST00000521951 HIBADHP31937 336 aaKnown RBP29.62■■■□□ 2.33
PVT1-212ENST00000521951 CCDC88AQ3V6T2 1871 aa29.62■■■□□ 2.33
PVT1-212ENST00000521951 SALL3Q9BXA9 1300 aa29.61■■■□□ 2.33
PVT1-212ENST00000521951 IARSP41252 1262 aaKnown RBP29.61■■■□□ 2.33
PVT1-212ENST00000521951 PHKA1P46020 1223 aa29.61■■■□□ 2.33
PVT1-212ENST00000521951 CCDC102BQ68D86 513 aa29.61■■■□□ 2.33
PVT1-212ENST00000521951 PRELPP51888 382 aa29.61■■■□□ 2.33
PVT1-212ENST00000521951 ZNF804AQ7Z570 1209 aa29.61■■■□□ 2.33
PVT1-212ENST00000521951 CCDC158Q5M9N0 1113 aa29.6■■■□□ 2.33
PVT1-212ENST00000521951 VPS37DQ86XT2 251 aa29.6■■■□□ 2.33
PVT1-212ENST00000521951 SBF1O95248 1867 aa29.59■■■□□ 2.33
PVT1-212ENST00000521951 DOK7Q18PE1 504 aa29.59■■■□□ 2.33
PVT1-212ENST00000521951 LARGE2Q8N3Y3 721 aa29.59■■■□□ 2.33
PVT1-212ENST00000521951 SKAP1Q86WV1 359 aa29.58■■■□□ 2.33
PVT1-212ENST00000521951 COA1Q9GZY4 146 aa29.58■■■□□ 2.33
PVT1-212ENST00000521951 CD209Q9NNX6 404 aa29.58■■■□□ 2.33
PVT1-212ENST00000521951 MX1P20591 662 aa29.57■■■□□ 2.32
PVT1-212ENST00000521951 TTC39AQ5SRH9 613 aa29.57■■■□□ 2.32
PVT1-212ENST00000521951 PLEKHM2Q8IWE5 1019 aa29.57■■■□□ 2.32
PVT1-212ENST00000521951 G3V3G9 751 aa29.56■■■□□ 2.32
PVT1-212ENST00000521951 DCAF8Q5TAQ9 597 aa29.56■■■□□ 2.32
PVT1-212ENST00000521951 DBNDD1Q9H9R9 158 aa29.56■■■□□ 2.32
PVT1-212ENST00000521951 ECHDC1Q9NTX5 307 aa29.56■■■□□ 2.32
PVT1-212ENST00000521951 STAP2Q9UGK3 403 aa29.56■■■□□ 2.32
PVT1-212ENST00000521951 COL4A5P29400 1685 aa29.56■■■□□ 2.32
PVT1-212ENST00000521951 CHD4Q14839 1912 aa29.56■■■□□ 2.32
PVT1-212ENST00000521951 PDE1AP54750 535 aa29.55■■■□□ 2.32
PVT1-212ENST00000521951 TSHZ3Q63HK5 1081 aa29.55■■■□□ 2.32
PVT1-212ENST00000521951 TDRD7Q8NHU6 1098 aaKnown RBP29.55■■■□□ 2.32
PVT1-212ENST00000521951 GPATCH3Q96I76 525 aa29.55■■■□□ 2.32
PVT1-212ENST00000521951 GNL3LQ9NVN8 582 aaKnown RBP29.55■■■□□ 2.32
PVT1-212ENST00000521951 IQSEC3Q9UPP2 1182 aaPredicted RBP29.55■■■□□ 2.32
PVT1-212ENST00000521951 UQCRFS1P1P0C7P4 283 aa29.55■■■□□ 2.32
PVT1-212ENST00000521951 IL1R1P14778 569 aa29.55■■■□□ 2.32
PVT1-212ENST00000521951 LMNB1P20700 586 aa29.55■■■□□ 2.32
PVT1-212ENST00000521951 ARID4AP29374 1257 aaPredicted RBP29.55■■■□□ 2.32
PVT1-212ENST00000521951 ZNF512BQ96KM6 892 aaPredicted RBP29.55■■■□□ 2.32
PVT1-212ENST00000521951 TTC41PQ6P2S7 1318 aa29.54■■■□□ 2.32
PVT1-212ENST00000521951 ECE2O60344 883 aa29.54■■■□□ 2.32
PVT1-212ENST00000521951 DICER1Q9UPY3 1922 aaKnown RBP29.53■■■□□ 2.32
PVT1-212ENST00000521951 ATP5JP18859 108 aa29.53■■■□□ 2.32
PVT1-212ENST00000521951 PODNQ7Z5L7 613 aa29.53■■■□□ 2.32
PVT1-212ENST00000521951 SCARF1Q14162 830 aa29.52■■■□□ 2.32
PVT1-212ENST00000521951 NIM1KQ8IY84 436 aa29.52■■■□□ 2.32
PVT1-212ENST00000521951 AKAP11Q9UKA4 1901 aa29.52■■■□□ 2.32
PVT1-212ENST00000521951 MYH13Q9UKX3 1938 aa29.52■■■□□ 2.32
PVT1-212ENST00000521951 DCAF8L1A6NGE4 600 aa29.51■■■□□ 2.32
PVT1-212ENST00000521951 PI4K2BQ8TCG2 481 aa29.51■■■□□ 2.32
PVT1-212ENST00000521951 JDP2Q8WYK2 163 aa29.51■■■□□ 2.32
PVT1-212ENST00000521951 OSBPL3Q9H4L5 887 aa29.51■■■□□ 2.32
PVT1-212ENST00000521951 ZBTB22O15209 634 aa29.5■■■□□ 2.31
PVT1-212ENST00000521951 FRAT2O75474 233 aaPredicted RBP29.5■■■□□ 2.31
PVT1-212ENST00000521951 MCAMP43121 646 aa29.5■■■□□ 2.31
PVT1-212ENST00000521951 RASGRF1Q13972 1273 aa29.5■■■□□ 2.31
PVT1-212ENST00000521951 SCN9AQ15858 1988 aa29.5■■■□□ 2.31
PVT1-212ENST00000521951 YDJCA8MPS7 323 aa29.5■■■□□ 2.31
PVT1-212ENST00000521951 SEMA3EO15041 775 aa29.5■■■□□ 2.31
PVT1-212ENST00000521951 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms