RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 GPSM2P81274 684 aa22.77■■□□□ 1.24
VEGFA-222ENST00000520948 RABL6Q3YEC7 729 aaPredicted RBP22.77■■□□□ 1.24
VEGFA-222ENST00000520948 GREM2Q9H772 168 aa22.77■■□□□ 1.24
VEGFA-222ENST00000520948 H7C1D1 291 aa22.76■■□□□ 1.23
VEGFA-222ENST00000520948 PSMD14O00487 310 aa22.76■■□□□ 1.23
VEGFA-222ENST00000520948 GNAI3P08754 354 aa22.76■■□□□ 1.23
VEGFA-222ENST00000520948 C20orf194Q5TEA3 1177 aa22.76■■□□□ 1.23
VEGFA-222ENST00000520948 LMBR1LQ6UX01 489 aa22.76■■□□□ 1.23
VEGFA-222ENST00000520948 ANKRD44Q8N8A2 993 aa22.76■■□□□ 1.23
VEGFA-222ENST00000520948 BICC1Q9H694 974 aaKnown RBP22.76■■□□□ 1.23
VEGFA-222ENST00000520948 POLLQ9UGP5 575 aa22.76■■□□□ 1.23
VEGFA-222ENST00000520948 UBTFL1P0CB47 393 aaPredicted RBP22.75■■□□□ 1.23
VEGFA-222ENST00000520948 RRP1P56182 461 aaKnown RBP22.75■■□□□ 1.23
VEGFA-222ENST00000520948 DOK7Q18PE1 504 aa22.75■■□□□ 1.23
VEGFA-222ENST00000520948 DLK2Q6UY11 383 aa22.75■■□□□ 1.23
VEGFA-222ENST00000520948 SAMD7Q7Z3H4 446 aa22.75■■□□□ 1.23
VEGFA-222ENST00000520948 ZC3H15Q8WU90 426 aaKnown RBP22.75■■□□□ 1.23
VEGFA-222ENST00000520948 ABHD8Q96I13 439 aa22.75■■□□□ 1.23
VEGFA-222ENST00000520948 CCDC85AQ96PX6 553 aaPredicted RBP22.75■■□□□ 1.23
VEGFA-222ENST00000520948 RPS8P62241 208 aaKnown RBP22.74■■□□□ 1.23
VEGFA-222ENST00000520948 CDC37L1Q7L3B6 337 aa22.74■■□□□ 1.23
VEGFA-222ENST00000520948 USP48Q86UV5 1035 aa22.74■■□□□ 1.23
VEGFA-222ENST00000520948 KCNQ5Q9NR82 932 aa22.74■■□□□ 1.23
VEGFA-222ENST00000520948 ECE2O60344 883 aa22.73■■□□□ 1.23
VEGFA-222ENST00000520948 EGFRP00533 1210 aa22.73■■□□□ 1.23
VEGFA-222ENST00000520948 MAP2K2P36507 400 aa22.73■■□□□ 1.23
VEGFA-222ENST00000520948 MVPQ14764 893 aaKnown RBP22.73■■□□□ 1.23
VEGFA-222ENST00000520948 TBC1D10BQ4KMP7 808 aaPredicted RBP22.73■■□□□ 1.23
VEGFA-222ENST00000520948 ITPRIPQ8IWB1 547 aa22.73■■□□□ 1.23
VEGFA-222ENST00000520948 HDAC5Q9UQL6 1122 aa22.73■■□□□ 1.23
VEGFA-222ENST00000520948 SCN9AQ15858 1988 aa22.72■■□□□ 1.23
VEGFA-222ENST00000520948 ITGA6P23229 1130 aa22.72■■□□□ 1.23
VEGFA-222ENST00000520948 FAM161AQ3B820 660 aa22.72■■□□□ 1.23
VEGFA-222ENST00000520948 COG6Q9Y2V7 657 aa22.72■■□□□ 1.23
VEGFA-222ENST00000520948 LRRFIP2Q9Y608 721 aaKnown RBP22.72■■□□□ 1.23
VEGFA-222ENST00000520948 POLR2AP24928 1970 aaKnown RBP22.72■■□□□ 1.23
VEGFA-222ENST00000520948 RBM26Q5T8P6 1007 aaKnown RBP22.71■■□□□ 1.23
VEGFA-222ENST00000520948 TBC1D16Q8TBP0 767 aa22.71■■□□□ 1.23
VEGFA-222ENST00000520948 DPF2Q92785 391 aa22.71■■□□□ 1.23
VEGFA-222ENST00000520948 EYA3Q99504 573 aa22.71■■□□□ 1.23
VEGFA-222ENST00000520948 HHIPL1Q96JK4 782 aa22.7■■□□□ 1.22
VEGFA-222ENST00000520948 CDC5LQ99459 802 aaKnown RBP22.7■■□□□ 1.22
VEGFA-222ENST00000520948 ANKRD18BA2A2Z9 1011 aa22.69■■□□□ 1.22
VEGFA-222ENST00000520948 IFIT5Q13325 482 aaKnown RBP22.69■■□□□ 1.22
VEGFA-222ENST00000520948 ANKRD18AQ8IVF6 992 aa22.69■■□□□ 1.22
VEGFA-222ENST00000520948 DDX19BQ9UMR2 479 aa22.69■■□□□ 1.22
VEGFA-222ENST00000520948 ADM5C9JUS6 153 aa22.68■■□□□ 1.22
VEGFA-222ENST00000520948 GNAI2P04899 355 aa22.68■■□□□ 1.22
VEGFA-222ENST00000520948 HUNKP57058 714 aa22.68■■□□□ 1.22
VEGFA-222ENST00000520948 MTX1Q13505 466 aa22.68■■□□□ 1.22
VEGFA-222ENST00000520948 KRT26Q7Z3Y9 468 aa22.68■■□□□ 1.22
VEGFA-222ENST00000520948 BSDC1Q9NW68 430 aaPredicted RBP22.68■■□□□ 1.22
VEGFA-222ENST00000520948 CASP8AP2Q9UKL3 1982 aa22.67■■□□□ 1.22
VEGFA-222ENST00000520948 UFL1O94874 794 aa22.67■■□□□ 1.22
VEGFA-222ENST00000520948 RPS12P25398 132 aaKnown RBP22.67■■□□□ 1.22
VEGFA-222ENST00000520948 RFX5P48382 616 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-222ENST00000520948 CCDC57Q2TAC2 916 aa22.67■■□□□ 1.22
VEGFA-222ENST00000520948 ZIC5Q96T25 663 aa22.67■■□□□ 1.22
VEGFA-222ENST00000520948 ANKIB1Q9P2G1 1089 aa22.67■■□□□ 1.22
VEGFA-222ENST00000520948 CHMP3Q9Y3E7 222 aa22.67■■□□□ 1.22
VEGFA-222ENST00000520948 SUPT16HQ9Y5B9 1047 aaKnown RBP22.67■■□□□ 1.22
VEGFA-222ENST00000520948 ZC3H12CQ9C0D7 883 aaKnown RBP22.66■■□□□ 1.22
VEGFA-222ENST00000520948 ZBTB40Q9NUA8 1239 aa22.66■■□□□ 1.22
VEGFA-222ENST00000520948 SPEF2Q9C093 1822 aa22.66■■□□□ 1.22
VEGFA-222ENST00000520948 CCDC85CA6NKD9 419 aa22.65■■□□□ 1.22
VEGFA-222ENST00000520948 G3V3G9 751 aa22.65■■□□□ 1.22
VEGFA-222ENST00000520948 KIF4BQ2VIQ3 1234 aa22.65■■□□□ 1.22
VEGFA-222ENST00000520948 DCAF8Q5TAQ9 597 aa22.65■■□□□ 1.22
VEGFA-222ENST00000520948 DCPSQ96C86 337 aaKnown RBP22.65■■□□□ 1.22
VEGFA-222ENST00000520948 ZNF594Q96JF6 807 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-222ENST00000520948 PSME4Q14997 1843 aa22.64■■□□□ 1.22
VEGFA-222ENST00000520948 ASTN2O75129 1339 aaPredicted RBP22.64■■□□□ 1.22
VEGFA-222ENST00000520948 CA12O43570 354 aa22.64■■□□□ 1.21
VEGFA-222ENST00000520948 IGHMBP2P38935 993 aaKnown RBP22.64■■□□□ 1.21
VEGFA-222ENST00000520948 PODXL2Q9NZ53 605 aa22.64■■□□□ 1.21
VEGFA-222ENST00000520948 GGA1Q9UJY5 639 aa22.64■■□□□ 1.21
VEGFA-222ENST00000520948 MINPP1Q9UNW1 487 aa22.64■■□□□ 1.21
VEGFA-222ENST00000520948 NOGQ13253 232 aa22.63■■□□□ 1.21
VEGFA-222ENST00000520948 CHMP4BQ9H444 224 aaKnown RBP22.63■■□□□ 1.21
VEGFA-222ENST00000520948 GBA2Q9HCG7 927 aaPredicted RBP22.63■■□□□ 1.21
VEGFA-222ENST00000520948 GGA3Q9NZ52 723 aa22.63■■□□□ 1.21
VEGFA-222ENST00000520948 VIL1P09327 827 aaKnown RBP22.62■■□□□ 1.21
VEGFA-222ENST00000520948 ATP8B2P98198 1209 aa22.62■■□□□ 1.21
VEGFA-222ENST00000520948 PTPN12Q05209 780 aaKnown RBP22.62■■□□□ 1.21
VEGFA-222ENST00000520948 RGMBQ6NW40 437 aa22.61■■□□□ 1.21
VEGFA-222ENST00000520948 LDHAL6AQ6ZMR3 332 aa22.61■■□□□ 1.21
VEGFA-222ENST00000520948 MPHOSPH8Q99549 860 aa22.61■■□□□ 1.21
VEGFA-222ENST00000520948 PUS3Q9BZE2 481 aaKnown RBP22.61■■□□□ 1.21
VEGFA-222ENST00000520948 C1orf115Q9H7X2 142 aa22.61■■□□□ 1.21
VEGFA-222ENST00000520948 PNMA6EA0A0J9YXQ4 647 aa22.6■■□□□ 1.21
VEGFA-222ENST00000520948 C2orf69Q8N8R5 385 aa22.6■■□□□ 1.21
VEGFA-222ENST00000520948 KLHDC4Q8TBB5 520 aa22.6■■□□□ 1.21
VEGFA-222ENST00000520948 RIPOR2Q9Y4F9 1068 aa22.6■■□□□ 1.21
VEGFA-222ENST00000520948 FAM155AB1AL88 458 aaPredicted RBP22.59■■□□□ 1.21
VEGFA-222ENST00000520948 POLA2Q14181 598 aa22.59■■□□□ 1.21
VEGFA-222ENST00000520948 SULF1Q8IWU6 871 aa22.59■■□□□ 1.21
VEGFA-222ENST00000520948 SSH3Q8TE77 659 aa22.59■■□□□ 1.21
VEGFA-222ENST00000520948 MCOLN1Q9GZU1 580 aa22.59■■□□□ 1.21
VEGFA-222ENST00000520948 COPRSQ9NQ92 184 aa22.59■■□□□ 1.21
VEGFA-222ENST00000520948 XDHP47989 1333 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms