RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 ZNF804BA4D1E1 1349 aa17.37■□□□□ 0.37
SDC2-203ENST00000519587 SNED1Q8TER0 1413 aa17.37■□□□□ 0.37
SDC2-203ENST00000519587 A0A1B0GUL7 405 aa17.36■□□□□ 0.37
SDC2-203ENST00000519587 C6orf229H3BNL8 230 aa17.36■□□□□ 0.37
SDC2-203ENST00000519587 PSMD1Q99460 953 aa17.36■□□□□ 0.37
SDC2-203ENST00000519587 BCL11AQ9H165 835 aa17.36■□□□□ 0.37
SDC2-203ENST00000519587 MYH13Q9UKX3 1938 aa17.36■□□□□ 0.37
SDC2-203ENST00000519587 MED23Q9ULK4 1368 aa17.36■□□□□ 0.37
SDC2-203ENST00000519587 KIF3CO14782 793 aa17.35■□□□□ 0.37
SDC2-203ENST00000519587 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
SDC2-203ENST00000519587 FGFR2P21802 821 aa17.35■□□□□ 0.37
SDC2-203ENST00000519587 GORABQ5T7V8 394 aa17.35■□□□□ 0.37
SDC2-203ENST00000519587 OLFM4Q6UX06 510 aa17.35■□□□□ 0.37
SDC2-203ENST00000519587 TBC1D16Q8TBP0 767 aa17.35■□□□□ 0.37
SDC2-203ENST00000519587 NEUROD6Q96NK8 337 aa17.35■□□□□ 0.37
SDC2-203ENST00000519587 LNPKQ9C0E8 428 aa17.35■□□□□ 0.37
SDC2-203ENST00000519587 TAOK3Q9H2K8 898 aa17.35■□□□□ 0.37
SDC2-203ENST00000519587 FKBP4Q02790 459 aaKnown RBP eCLIP17.34■□□□□ 0.377e-6■□□□□ 9.9
SDC2-203ENST00000519587 CAVIN4Q5BKX8 364 aa17.34■□□□□ 0.37
SDC2-203ENST00000519587 RTFDC1Q9BY42 306 aaPredicted RBP17.34■□□□□ 0.37
SDC2-203ENST00000519587 LTBP3Q9NS15 1303 aa17.34■□□□□ 0.37
SDC2-203ENST00000519587 C15orf52Q6ZUT6 534 aaKnown RBP17.33■□□□□ 0.36
SDC2-203ENST00000519587 ZNF804AQ7Z570 1209 aa17.33■□□□□ 0.36
SDC2-203ENST00000519587 VPS37DQ86XT2 251 aa17.33■□□□□ 0.36
SDC2-203ENST00000519587 EAF2Q96CJ1 260 aaPredicted RBP17.33■□□□□ 0.36
SDC2-203ENST00000519587 POLLQ9UGP5 575 aa17.33■□□□□ 0.36
SDC2-203ENST00000519587 SLC51AQ86UW1 340 aa17.32■□□□□ 0.36
SDC2-203ENST00000519587 ZC3H12CQ9C0D7 883 aaKnown RBP17.32■□□□□ 0.36
SDC2-203ENST00000519587 VPS33BQ9H267 617 aa17.32■□□□□ 0.36
SDC2-203ENST00000519587 GNL3LQ9NVN8 582 aaKnown RBP17.32■□□□□ 0.36
SDC2-203ENST00000519587 G3V3G9 751 aa17.31■□□□□ 0.36
SDC2-203ENST00000519587 CAPN15O75808 1086 aa17.31■□□□□ 0.36
SDC2-203ENST00000519587 TIMM10P62072 90 aa17.31■□□□□ 0.36
SDC2-203ENST00000519587 WASHC4Q2M389 1173 aa17.31■□□□□ 0.36
SDC2-203ENST00000519587 CCDC158Q5M9N0 1113 aa17.31■□□□□ 0.36
SDC2-203ENST00000519587 DCAF8Q5TAQ9 597 aa17.31■□□□□ 0.36
SDC2-203ENST00000519587 DNAJC5GQ8N7S2 189 aa17.31■□□□□ 0.36
SDC2-203ENST00000519587 XAGE2Q96GT9 111 aa17.31■□□□□ 0.36
SDC2-203ENST00000519587 DBNLQ9UJU6 430 aaKnown RBP17.31■□□□□ 0.36
SDC2-203ENST00000519587 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.31■□□□□ 0.36
SDC2-203ENST00000519587 WDR90Q96KV7 1748 aa17.3■□□□□ 0.36
SDC2-203ENST00000519587 SNAP23O00161 211 aa17.3■□□□□ 0.36
SDC2-203ENST00000519587 MX1P20591 662 aa17.3■□□□□ 0.36
SDC2-203ENST00000519587 DBNDD2Q9BQY9 259 aa17.3■□□□□ 0.36
SDC2-203ENST00000519587 CCDC8Q9H0W5 538 aaPredicted RBP17.3■□□□□ 0.36
SDC2-203ENST00000519587 CCDC88AQ3V6T2 1871 aa17.29■□□□□ 0.36
SDC2-203ENST00000519587 AOX1Q06278 1338 aa17.29■□□□□ 0.36
SDC2-203ENST00000519587 TTC41PQ6P2S7 1318 aa17.29■□□□□ 0.36
SDC2-203ENST00000519587 ERC2O15083 957 aa17.29■□□□□ 0.36
SDC2-203ENST00000519587 PPIP5K2O43314 1243 aa17.29■□□□□ 0.36
SDC2-203ENST00000519587 UQCRFS1P1P0C7P4 283 aa17.29■□□□□ 0.36
SDC2-203ENST00000519587 ADORA1P30542 326 aa17.29■□□□□ 0.36
SDC2-203ENST00000519587 HIBADHP31937 336 aaKnown RBP17.29■□□□□ 0.36
SDC2-203ENST00000519587 KIAA2012Q0VF49 1180 aa17.29■□□□□ 0.36
SDC2-203ENST00000519587 TTC39AQ5SRH9 613 aa17.29■□□□□ 0.36
SDC2-203ENST00000519587 ARHGAP27Q6ZUM4 889 aa17.29■□□□□ 0.36
SDC2-203ENST00000519587 TLR7Q9NYK1 1049 aaKnown RBP17.29■□□□□ 0.36
SDC2-203ENST00000519587 DICER1Q9UPY3 1922 aaKnown RBP17.29■□□□□ 0.36
SDC2-203ENST00000519587 NFKBIEO00221 500 aa17.28■□□□□ 0.36
SDC2-203ENST00000519587 SEMA3EO15041 775 aa17.28■□□□□ 0.36
SDC2-203ENST00000519587 IARSP41252 1262 aaKnown RBP17.28■□□□□ 0.36
SDC2-203ENST00000519587 LARGE2Q8N3Y3 721 aa17.28■□□□□ 0.36
SDC2-203ENST00000519587 GPR101Q96P66 508 aaPredicted RBP17.28■□□□□ 0.36
SDC2-203ENST00000519587 COA1Q9GZY4 146 aa17.28■□□□□ 0.36
SDC2-203ENST00000519587 ECHDC1Q9NTX5 307 aa17.28■□□□□ 0.36
SDC2-203ENST00000519587 IRS2Q9Y4H2 1338 aa17.27■□□□□ 0.36
SDC2-203ENST00000519587 SBF1O95248 1867 aa17.27■□□□□ 0.36
SDC2-203ENST00000519587 RIMBP2O15034 1052 aa17.27■□□□□ 0.36
SDC2-203ENST00000519587 FRAT2O75474 233 aaPredicted RBP17.27■□□□□ 0.36
SDC2-203ENST00000519587 KLRK1P26718 216 aa17.27■□□□□ 0.36
SDC2-203ENST00000519587 GYG1P46976 350 aa17.27■□□□□ 0.36
SDC2-203ENST00000519587 AOC3Q16853 763 aa17.27■□□□□ 0.36
SDC2-203ENST00000519587 COL13A1Q5TAT6 717 aaPredicted RBP17.27■□□□□ 0.36
SDC2-203ENST00000519587 CCDC102BQ68D86 513 aa17.27■□□□□ 0.36
SDC2-203ENST00000519587 ZNF277Q9NRM2 450 aaPredicted RBP17.27■□□□□ 0.36
SDC2-203ENST00000519587 TIAM2Q8IVF5 1701 aa17.27■□□□□ 0.35
SDC2-203ENST00000519587 PSME4Q14997 1843 aa17.26■□□□□ 0.35
SDC2-203ENST00000519587 WTIPA6NIX2 430 aaPredicted RBP17.26■□□□□ 0.35
SDC2-203ENST00000519587 PHKA1P46020 1223 aa17.26■□□□□ 0.35
SDC2-203ENST00000519587 BCAMP50895 628 aa17.26■□□□□ 0.35
SDC2-203ENST00000519587 RASSF7Q02833 373 aa17.26■□□□□ 0.35
SDC2-203ENST00000519587 FBXO33Q7Z6M2 555 aa17.26■□□□□ 0.35
SDC2-203ENST00000519587 NIM1KQ8IY84 436 aa17.26■□□□□ 0.35
SDC2-203ENST00000519587 JDP2Q8WYK2 163 aa17.26■□□□□ 0.35
SDC2-203ENST00000519587 ZNF512BQ96KM6 892 aaPredicted RBP17.26■□□□□ 0.35
SDC2-203ENST00000519587 FAM84BQ96KN1 310 aaPredicted RBP17.26■□□□□ 0.35
SDC2-203ENST00000519587 STAP2Q9UGK3 403 aa17.26■□□□□ 0.35
SDC2-203ENST00000519587 AK9Q5TCS8 1911 aa17.25■□□□□ 0.35
SDC2-203ENST00000519587 SALL3Q9BXA9 1300 aa17.25■□□□□ 0.35
SDC2-203ENST00000519587 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
SDC2-203ENST00000519587 TOMM70O94826 608 aa17.25■□□□□ 0.35
SDC2-203ENST00000519587 LMNB1P20700 586 aa17.25■□□□□ 0.35
SDC2-203ENST00000519587 ARID4AP29374 1257 aaPredicted RBP17.25■□□□□ 0.35
SDC2-203ENST00000519587 PDE1AP54750 535 aa17.25■□□□□ 0.35
SDC2-203ENST00000519587 TXNRD3Q86VQ6 643 aa17.25■□□□□ 0.35
SDC2-203ENST00000519587 C16orf71Q8IYS4 520 aaPredicted RBP17.25■□□□□ 0.35
SDC2-203ENST00000519587 OTUD7AQ8TE49 926 aaPredicted RBP17.25■□□□□ 0.35
SDC2-203ENST00000519587 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.25■□□□□ 0.35
SDC2-203ENST00000519587 PDS5AQ29RF7 1337 aaKnown RBP17.24■□□□□ 0.35
SDC2-203ENST00000519587 AKAP11Q9UKA4 1901 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms