RNA–Protein interactions for RNA: ENST00000517997.5

CDK16-210, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-210ENST00000517997 PTPN12Q05209 780 aaKnown RBP16.47■□□□□ 0.23
CDK16-210ENST00000517997 UBE4AQ14139 1066 aa16.47■□□□□ 0.23
CDK16-210ENST00000517997 METTL24Q5JXM2 366 aa16.47■□□□□ 0.23
CDK16-210ENST00000517997 PNMA8AQ86V59 439 aaPredicted RBP16.47■□□□□ 0.23
CDK16-210ENST00000517997 POLR2AP24928 1970 aaKnown RBP16.47■□□□□ 0.23
CDK16-210ENST00000517997 IRS2Q9Y4H2 1338 aa16.46■□□□□ 0.23
CDK16-210ENST00000517997 ZNF609O15014 1411 aa16.46■□□□□ 0.23
CDK16-210ENST00000517997 EYA2O00167 538 aa16.46■□□□□ 0.23
CDK16-210ENST00000517997 VIL1P09327 827 aaKnown RBP16.46■□□□□ 0.23
CDK16-210ENST00000517997 RPS12P25398 132 aaKnown RBP16.46■□□□□ 0.23
CDK16-210ENST00000517997 EPS15P42566 896 aa16.46■□□□□ 0.23
CDK16-210ENST00000517997 MTX1Q13505 466 aa16.46■□□□□ 0.23
CDK16-210ENST00000517997 EAPPQ56P03 285 aaPredicted RBP16.46■□□□□ 0.23
CDK16-210ENST00000517997 LDHDQ86WU2 507 aa16.46■□□□□ 0.23
CDK16-210ENST00000517997 PANK1Q8TE04 598 aa16.46■□□□□ 0.23
CDK16-210ENST00000517997 DPF2Q92785 391 aa16.46■□□□□ 0.23
CDK16-210ENST00000517997 FBXO3Q9UK99 471 aa16.46■□□□□ 0.23
CDK16-210ENST00000517997 USP17L3A6NCW0 530 aa16.45■□□□□ 0.22
CDK16-210ENST00000517997 USP17L4A6NCW7 530 aa16.45■□□□□ 0.22
CDK16-210ENST00000517997 SRGAP3O43295 1099 aa16.45■□□□□ 0.22
CDK16-210ENST00000517997 CIAO1O76071 339 aa16.45■□□□□ 0.22
CDK16-210ENST00000517997 POTEIP0CG38 1075 aa16.45■□□□□ 0.22
CDK16-210ENST00000517997 POTEJP0CG39 1038 aa16.45■□□□□ 0.22
CDK16-210ENST00000517997 USP17L1Q7RTZ2 530 aa16.45■□□□□ 0.22
CDK16-210ENST00000517997 ZNF804AQ7Z570 1209 aa16.45■□□□□ 0.22
CDK16-210ENST00000517997 VGLL2Q8N8G2 317 aa16.45■□□□□ 0.22
CDK16-210ENST00000517997 ADARB2Q9NS39 739 aaKnown RBP16.45■□□□□ 0.22
CDK16-210ENST00000517997 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
CDK16-210ENST00000517997 ZBTB7BO15156 539 aaPredicted RBP16.44■□□□□ 0.22
CDK16-210ENST00000517997 PDE8BO95263 885 aa16.44■□□□□ 0.22
CDK16-210ENST00000517997 CHADLQ6NUI6 762 aa16.44■□□□□ 0.22
CDK16-210ENST00000517997 USP50Q70EL3 339 aaPredicted RBP16.44■□□□□ 0.22
CDK16-210ENST00000517997 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.44■□□□□ 0.22
CDK16-210ENST00000517997 SIL1Q9H173 461 aa16.44■□□□□ 0.22
CDK16-210ENST00000517997 COPRSQ9NQ92 184 aa16.44■□□□□ 0.22
CDK16-210ENST00000517997 CNOT7Q9UIV1 285 aaKnown RBP16.44■□□□□ 0.22
CDK16-210ENST00000517997 H7C1D1 291 aa16.43■□□□□ 0.22
CDK16-210ENST00000517997 HSPA6P17066 643 aa16.43■□□□□ 0.22
CDK16-210ENST00000517997 RSBN1LQ6PCB5 846 aaPredicted RBP16.43■□□□□ 0.22
CDK16-210ENST00000517997 ATG9AQ7Z3C6 839 aa16.43■□□□□ 0.22
CDK16-210ENST00000517997 MICALL2Q8IY33 904 aa16.43■□□□□ 0.22
CDK16-210ENST00000517997 AGBL3Q8NEM8 1001 aa16.43■□□□□ 0.22
CDK16-210ENST00000517997 CD209Q9NNX6 404 aa16.43■□□□□ 0.22
CDK16-210ENST00000517997 PA2G4Q9UQ80 394 aaKnown RBP16.43■□□□□ 0.22
CDK16-210ENST00000517997 CLEC11AQ9Y240 323 aa16.43■□□□□ 0.22
CDK16-210ENST00000517997 TRPM7Q96QT4 1865 aa16.43■□□□□ 0.22
CDK16-210ENST00000517997 ARAP2Q8WZ64 1704 aa16.42■□□□□ 0.22
CDK16-210ENST00000517997 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
CDK16-210ENST00000517997 STRIP1Q5VSL9 837 aa16.42■□□□□ 0.22
CDK16-210ENST00000517997 SHTN1A0MZ66 631 aa16.41■□□□□ 0.22
CDK16-210ENST00000517997 IL1R1P14778 569 aa16.41■□□□□ 0.22
CDK16-210ENST00000517997 IL15P40933 162 aaPredicted RBP16.41■□□□□ 0.22
CDK16-210ENST00000517997 MVPQ14764 893 aaKnown RBP16.41■□□□□ 0.22
CDK16-210ENST00000517997 DACT2Q5SW24 774 aa16.41■□□□□ 0.22
CDK16-210ENST00000517997 TTLL5Q6EMB2 1281 aa16.41■□□□□ 0.22
CDK16-210ENST00000517997 FBXW7Q969H0 707 aa16.41■□□□□ 0.22
CDK16-210ENST00000517997 CEP126Q9P2H0 1117 aa16.41■□□□□ 0.22
CDK16-210ENST00000517997 MYO3BQ8WXR4 1341 aa16.41■□□□□ 0.22
CDK16-210ENST00000517997 PNMA6EA0A0J9YXQ4 647 aa16.4■□□□□ 0.22
CDK16-210ENST00000517997 HIBADHP31937 336 aaKnown RBP16.4■□□□□ 0.22
CDK16-210ENST00000517997 GYG1P46976 350 aa16.4■□□□□ 0.22
CDK16-210ENST00000517997 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
CDK16-210ENST00000517997 FAM84BQ96KN1 310 aaPredicted RBP16.4■□□□□ 0.22
CDK16-210ENST00000517997 GMLQ99445 158 aa16.4■□□□□ 0.22
CDK16-210ENST00000517997 C1orf115Q9H7X2 142 aa16.4■□□□□ 0.22
CDK16-210ENST00000517997 DDX19BQ9UMR2 479 aa16.4■□□□□ 0.22
CDK16-210ENST00000517997 IFIT1P09914 478 aaKnown RBP16.39■□□□□ 0.21
CDK16-210ENST00000517997 SLC5A1P13866 664 aa16.39■□□□□ 0.21
CDK16-210ENST00000517997 FGFR2P21802 821 aa16.39■□□□□ 0.21
CDK16-210ENST00000517997 GTF2IP78347 998 aa16.39■□□□□ 0.21
CDK16-210ENST00000517997 CAVIN4Q5BKX8 364 aa16.39■□□□□ 0.21
CDK16-210ENST00000517997 VPS37DQ86XT2 251 aa16.39■□□□□ 0.21
CDK16-210ENST00000517997 TRPM4Q8TD43 1214 aa16.39■□□□□ 0.21
CDK16-210ENST00000517997 COG6Q9Y2V7 657 aa16.39■□□□□ 0.21
CDK16-210ENST00000517997 ECM29Q5VYK3 1845 aa16.38■□□□□ 0.21
CDK16-210ENST00000517997 USP17L8P0C7I0 530 aa16.38■□□□□ 0.21
CDK16-210ENST00000517997 APLP1P51693 650 aa16.38■□□□□ 0.21
CDK16-210ENST00000517997 ZNF280AP59817 542 aaPredicted RBP16.38■□□□□ 0.21
CDK16-210ENST00000517997 ATP8B2P98198 1209 aa16.38■□□□□ 0.21
CDK16-210ENST00000517997 TBC1D10BQ4KMP7 808 aaPredicted RBP16.38■□□□□ 0.21
CDK16-210ENST00000517997 SAMD7Q7Z3H4 446 aa16.38■□□□□ 0.21
CDK16-210ENST00000517997 FBXO33Q7Z6M2 555 aa16.38■□□□□ 0.21
CDK16-210ENST00000517997 ZC3H15Q8WU90 426 aaKnown RBP16.38■□□□□ 0.21
CDK16-210ENST00000517997 LPIN2Q92539 896 aa16.38■□□□□ 0.21
CDK16-210ENST00000517997 MXD3Q9BW11 206 aa16.38■□□□□ 0.21
CDK16-210ENST00000517997 CHMP4BQ9H444 224 aaKnown RBP16.38■□□□□ 0.21
CDK16-210ENST00000517997 SASH1O94885 1247 aa16.37■□□□□ 0.21
CDK16-210ENST00000517997 HIRAP54198 1017 aaPredicted RBP16.37■□□□□ 0.21
CDK16-210ENST00000517997 POLA2Q14181 598 aa16.37■□□□□ 0.21
CDK16-210ENST00000517997 ATP2B3Q16720 1220 aa16.37■□□□□ 0.21
CDK16-210ENST00000517997 MAP1SQ66K74 1059 aaPredicted RBP16.37■□□□□ 0.21
CDK16-210ENST00000517997 CNTROBQ8N137 903 aa16.37■□□□□ 0.21
CDK16-210ENST00000517997 TDRD7Q8NHU6 1098 aaKnown RBP16.37■□□□□ 0.21
CDK16-210ENST00000517997 SSH3Q8TE77 659 aa16.37■□□□□ 0.21
CDK16-210ENST00000517997 MMP14P50281 582 aa16.36■□□□□ 0.21
CDK16-210ENST00000517997 G3BP1Q13283 466 aaKnown RBP eCLIP16.36■□□□□ 0.21
CDK16-210ENST00000517997 KIF4BQ2VIQ3 1234 aa16.36■□□□□ 0.21
CDK16-210ENST00000517997 C20orf194Q5TEA3 1177 aa16.36■□□□□ 0.21
CDK16-210ENST00000517997 OGFOD1Q8N543 542 aa16.36■□□□□ 0.21
CDK16-210ENST00000517997 PGAP2Q9UHJ9 254 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms