RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 PUM3Q15397 648 aaKnown RBP14.08□□□□□ -0.16
ARFGEF1-202ENST00000517955 TNNI3KQ59H18 835 aa14.08□□□□□ -0.16
ARFGEF1-202ENST00000517955 DALRD3Q5D0E6 543 aaKnown RBP14.08□□□□□ -0.16
ARFGEF1-202ENST00000517955 C15orf52Q6ZUT6 534 aaKnown RBP14.08□□□□□ -0.16
ARFGEF1-202ENST00000517955 LPIN2Q92539 896 aa14.08□□□□□ -0.16
ARFGEF1-202ENST00000517955 TMX4Q9H1E5 349 aaPredicted RBP14.08□□□□□ -0.16
ARFGEF1-202ENST00000517955 PPP1R1BQ9UD71 204 aaPredicted RBP14.08□□□□□ -0.16
ARFGEF1-202ENST00000517955 FPGT-TNNI3KV9GXZ4 949 aa14.08□□□□□ -0.16
ARFGEF1-202ENST00000517955 NLGN2Q8NFZ4 835 aa14.07□□□□□ -0.16
ARFGEF1-202ENST00000517955 EAF2Q96CJ1 260 aaPredicted RBP14.07□□□□□ -0.16
ARFGEF1-202ENST00000517955 RTFDC1Q9BY42 306 aaPredicted RBP14.07□□□□□ -0.16
ARFGEF1-202ENST00000517955 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.07□□□□□ -0.16
ARFGEF1-202ENST00000517955 ARFGEF1Q9Y6D6 1849 aa14.06□□□□□ -0.16
ARFGEF1-202ENST00000517955 CACNA1SQ13698 1873 aa14.06□□□□□ -0.16
ARFGEF1-202ENST00000517955 ATP2B4P23634 1241 aa14.06□□□□□ -0.16
ARFGEF1-202ENST00000517955 GPSM2P81274 684 aa14.06□□□□□ -0.16
ARFGEF1-202ENST00000517955 RTKN2Q8IZC4 609 aa14.06□□□□□ -0.16
ARFGEF1-202ENST00000517955 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
ARFGEF1-202ENST00000517955 SALL3Q9BXA9 1300 aa14.06□□□□□ -0.16
ARFGEF1-202ENST00000517955 ZNF609O15014 1411 aa14.06□□□□□ -0.16
ARFGEF1-202ENST00000517955 A0A1B0GUL7 405 aa14.05□□□□□ -0.16
ARFGEF1-202ENST00000517955 SMARCA5O60264 1052 aaPredicted RBP14.05□□□□□ -0.16
ARFGEF1-202ENST00000517955 TAF5LO75529 589 aa14.05□□□□□ -0.16
ARFGEF1-202ENST00000517955 ATP2B3Q16720 1220 aa14.05□□□□□ -0.16
ARFGEF1-202ENST00000517955 MPNDQ8N594 471 aa14.05□□□□□ -0.16
ARFGEF1-202ENST00000517955 HELBQ8NG08 1087 aaPredicted RBP14.05□□□□□ -0.16
ARFGEF1-202ENST00000517955 LNPKQ9C0E8 428 aa14.05□□□□□ -0.16
ARFGEF1-202ENST00000517955 VPS33BQ9H267 617 aa14.05□□□□□ -0.16
ARFGEF1-202ENST00000517955 OSBPL3Q9H4L5 887 aa14.05□□□□□ -0.16
ARFGEF1-202ENST00000517955 IL1RAPL2Q9NP60 686 aa14.05□□□□□ -0.16
ARFGEF1-202ENST00000517955 STAP2Q9UGK3 403 aa14.05□□□□□ -0.16
ARFGEF1-202ENST00000517955 ZNF804BA4D1E1 1349 aa14.05□□□□□ -0.16
ARFGEF1-202ENST00000517955 IRS2Q9Y4H2 1338 aa14.05□□□□□ -0.16
ARFGEF1-202ENST00000517955 ARAP2Q8WZ64 1704 aa14.04□□□□□ -0.16
ARFGEF1-202ENST00000517955 APBB1O00213 710 aa14.04□□□□□ -0.16
ARFGEF1-202ENST00000517955 IFIT1P09914 478 aaKnown RBP14.04□□□□□ -0.16
ARFGEF1-202ENST00000517955 SLC5A1P13866 664 aa14.04□□□□□ -0.16
ARFGEF1-202ENST00000517955 CCDC93Q567U6 631 aa14.04□□□□□ -0.16
ARFGEF1-202ENST00000517955 AACSQ86V21 672 aa14.04□□□□□ -0.16
ARFGEF1-202ENST00000517955 TBC1D16Q8TBP0 767 aa14.04□□□□□ -0.16
ARFGEF1-202ENST00000517955 ZNF512BQ96KM6 892 aaPredicted RBP14.04□□□□□ -0.16
ARFGEF1-202ENST00000517955 PSMD1Q99460 953 aa14.04□□□□□ -0.16
ARFGEF1-202ENST00000517955 ANKIB1Q9P2G1 1089 aa14.04□□□□□ -0.16
ARFGEF1-202ENST00000517955 GGA1Q9UJY5 639 aa14.04□□□□□ -0.16
ARFGEF1-202ENST00000517955 NSFL1CQ9UNZ2 370 aaKnown RBP14.04□□□□□ -0.16
ARFGEF1-202ENST00000517955 C21orf2O43822 256 aa14.03□□□□□ -0.16
ARFGEF1-202ENST00000517955 IFIT2P09913 472 aaKnown RBP14.03□□□□□ -0.16
ARFGEF1-202ENST00000517955 PDE4AP27815 886 aa14.03□□□□□ -0.16
ARFGEF1-202ENST00000517955 TIMM10P62072 90 aa14.03□□□□□ -0.16
ARFGEF1-202ENST00000517955 DPP8Q6V1X1 898 aaPredicted RBP14.03□□□□□ -0.16
ARFGEF1-202ENST00000517955 KLHL34Q8N239 644 aa14.03□□□□□ -0.16
ARFGEF1-202ENST00000517955 XAGE2Q96GT9 111 aa14.03□□□□□ -0.16
ARFGEF1-202ENST00000517955 POLLQ9UGP5 575 aa14.03□□□□□ -0.16
ARFGEF1-202ENST00000517955 DBNLQ9UJU6 430 aaKnown RBP14.03□□□□□ -0.16
ARFGEF1-202ENST00000517955 AOX1Q06278 1338 aa14.03□□□□□ -0.16
ARFGEF1-202ENST00000517955 TTC41PQ6P2S7 1318 aa14.03□□□□□ -0.16
ARFGEF1-202ENST00000517955 DUOX1Q9NRD9 1551 aa14.03□□□□□ -0.16
ARFGEF1-202ENST00000517955 FER1L6Q2WGJ9 1857 aa14.02□□□□□ -0.16
ARFGEF1-202ENST00000517955 MED23Q9ULK4 1368 aa14.02□□□□□ -0.17
ARFGEF1-202ENST00000517955 LTBP3Q9NS15 1303 aa14.02□□□□□ -0.17
ARFGEF1-202ENST00000517955 FBXO33Q7Z6M2 555 aa14.02□□□□□ -0.17
ARFGEF1-202ENST00000517955 PLEKHM2Q8IWE5 1019 aa14.02□□□□□ -0.17
ARFGEF1-202ENST00000517955 C16orf71Q8IYS4 520 aaPredicted RBP14.02□□□□□ -0.17
ARFGEF1-202ENST00000517955 SUPT20HQ8NEM7 779 aa14.02□□□□□ -0.17
ARFGEF1-202ENST00000517955 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.02□□□□□ -0.17
ARFGEF1-202ENST00000517955 MX1P20591 662 aa14.01□□□□□ -0.17
ARFGEF1-202ENST00000517955 KCNJ4P48050 445 aa14.01□□□□□ -0.17
ARFGEF1-202ENST00000517955 PDE1AP54750 535 aa14.01□□□□□ -0.17
ARFGEF1-202ENST00000517955 OLFM4Q6UX06 510 aa14.01□□□□□ -0.17
ARFGEF1-202ENST00000517955 SLC51AQ86UW1 340 aa14.01□□□□□ -0.17
ARFGEF1-202ENST00000517955 FAM84BQ96KN1 310 aaPredicted RBP14.01□□□□□ -0.17
ARFGEF1-202ENST00000517955 NEUROD6Q96NK8 337 aa14.01□□□□□ -0.17
ARFGEF1-202ENST00000517955 EYA3Q99504 573 aa14.01□□□□□ -0.17
ARFGEF1-202ENST00000517955 DBNDD2Q9BQY9 259 aa14.01□□□□□ -0.17
ARFGEF1-202ENST00000517955 CCDC8Q9H0W5 538 aaPredicted RBP14.01□□□□□ -0.17
ARFGEF1-202ENST00000517955 WTIPA6NIX2 430 aaPredicted RBP14□□□□□ -0.17
ARFGEF1-202ENST00000517955 SNAP23O00161 211 aa14□□□□□ -0.17
ARFGEF1-202ENST00000517955 UFL1O94874 794 aa14□□□□□ -0.17
ARFGEF1-202ENST00000517955 ATP5JP18859 108 aa14□□□□□ -0.17
ARFGEF1-202ENST00000517955 FKBP4Q02790 459 aaKnown RBP eCLIP14□□□□□ -0.17
ARFGEF1-202ENST00000517955 GPATCH3Q96I76 525 aa14□□□□□ -0.17
ARFGEF1-202ENST00000517955 ECHDC1Q9NTX5 307 aa14□□□□□ -0.17
ARFGEF1-202ENST00000517955 BCS1LQ9Y276 419 aa14□□□□□ -0.17
ARFGEF1-202ENST00000517955 ERC2O15083 957 aa13.99□□□□□ -0.17
ARFGEF1-202ENST00000517955 UQCRFS1P1P0C7P4 283 aa13.99□□□□□ -0.17
ARFGEF1-202ENST00000517955 ARID4AP29374 1257 aaPredicted RBP13.99□□□□□ -0.17
ARFGEF1-202ENST00000517955 ADORA1P30542 326 aa13.99□□□□□ -0.17
ARFGEF1-202ENST00000517955 CAVIN4Q5BKX8 364 aa13.99□□□□□ -0.17
ARFGEF1-202ENST00000517955 CCDC158Q5M9N0 1113 aa13.99□□□□□ -0.17
ARFGEF1-202ENST00000517955 CCDC102BQ68D86 513 aa13.99□□□□□ -0.17
ARFGEF1-202ENST00000517955 OTUD7AQ8TE49 926 aaPredicted RBP13.99□□□□□ -0.17
ARFGEF1-202ENST00000517955 TLR7Q9NYK1 1049 aaKnown RBP13.99□□□□□ -0.17
ARFGEF1-202ENST00000517955 GOLGB1Q14789 3259 aaKnown RBP13.99□□□□□ -0.17
ARFGEF1-202ENST00000517955 PDS5AQ29RF7 1337 aaKnown RBP13.98□□□□□ -0.17
ARFGEF1-202ENST00000517955 C6orf229H3BNL8 230 aa13.98□□□□□ -0.17
ARFGEF1-202ENST00000517955 SEMA3EO15041 775 aa13.98□□□□□ -0.17
ARFGEF1-202ENST00000517955 GLRX3O76003 335 aaKnown RBP13.98□□□□□ -0.17
ARFGEF1-202ENST00000517955 IL1R1P14778 569 aa13.98□□□□□ -0.17
ARFGEF1-202ENST00000517955 HIBADHP31937 336 aaKnown RBP13.98□□□□□ -0.17
ARFGEF1-202ENST00000517955 KIAA2012Q0VF49 1180 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms