RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 ZNF408Q9H9D4 720 aa5.47□□□□□ -1.53
RNU6-27P-201ENST00000516146 TLR7Q9NYK1 1049 aaKnown RBP5.47□□□□□ -1.53
RNU6-27P-201ENST00000516146 PLA2G2EQ9NZK7 142 aa5.47□□□□□ -1.53
RNU6-27P-201ENST00000516146 SIRPGQ9P1W8 387 aa5.47□□□□□ -1.53
RNU6-27P-201ENST00000516146 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.47□□□□□ -1.53
RNU6-27P-201ENST00000516146 F6X3S4 739 aa5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 MAP3K6O95382 1288 aa5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 HOXD8P13378 290 aaPredicted RBP5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 NFKB1P19838 968 aa5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 LMNB1P20700 586 aa5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 LMNB2Q03252 620 aa5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 SFSWAPQ12872 951 aaKnown RBP5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 SERINC3Q13530 473 aa5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 NEUROD1Q13562 356 aa5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 ANKS3Q6ZW76 656 aa5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 EAF1Q96JC9 268 aaPredicted RBP5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 KCNQ5Q9NR82 932 aa5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 GINM1Q9NU53 330 aa5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.46□□□□□ -1.54
RNU6-27P-201ENST00000516146 DCDC2BA2VCK2 349 aa5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 H7C1W4 665 aa5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 ITPKAP23677 461 aa5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 HSD3B2P26439 372 aa5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 RPS26P62854 115 aaKnown RBP5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 MAP3K10Q02779 954 aa5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 APOBRQ0VD83 1088 aa5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 RPS26P11Q5JNZ5 115 aaPredicted RBP5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 EGFLAMQ63HQ2 1017 aa5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 FBXL19Q6PCT2 694 aa5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 RIPOR1Q6ZS17 1223 aa5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 NKD1Q969G9 470 aa5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 NUCKS1Q9H1E3 243 aaKnown RBP5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 MARK1Q9P0L2 795 aa5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 ZFATQ9P243 1243 aa5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 SAMM50Q9Y512 469 aa5.45□□□□□ -1.54
RNU6-27P-201ENST00000516146 ROBO2Q9HCK4 1378 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 SBNO2Q9Y2G9 1366 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 GREM1O60565 184 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 PF4P02776 101 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 CELA3AP09093 270 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 BMP1P13497 986 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 NRLP54845 237 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 FAM160A1Q05DH4 1040 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 SPEM2Q0P670 501 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 CAMK2GQ13555 558 aaPredicted RBP5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 TNNI3KQ59H18 835 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 PCNX4Q63HM2 1172 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 TTBK2Q6IQ55 1244 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 JAZF1Q86VZ6 243 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 NLGN1Q8N2Q7 840 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 GOLM1Q8NBJ4 401 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 CNTNAP3BQ96NU0 1288 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 SRPK1Q96SB4 655 aaKnown RBP5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 SRRTQ9BXP5 876 aaKnown RBP5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 CNTNAP3Q9BZ76 1288 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 BHLHE41Q9C0J9 482 aaPredicted RBP5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 DZANK1Q9NVP4 752 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 PRKAG3Q9UGI9 489 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 GPN3Q9UHW5 284 aaPredicted RBP5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 TLR6Q9Y2C9 796 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 MRVI1Q9Y6F6 885 aa5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.44□□□□□ -1.54
RNU6-27P-201ENST00000516146 A0A096LPE4 126 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 A0A1W2PPZ6 126 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 FAM187AA6NFU0 413 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 MAN1A2O60476 641 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 AVPP01185 164 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 MAPTP10636 758 aaKnown RBP5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 GARTP22102 1010 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 ETFBP38117 255 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 GRIA4P48058 902 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 TNP2Q05952 138 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 PPP2R3AQ06190 1150 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 RAB33AQ14088 237 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 PCSK7Q16549 785 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 AGMOQ6ZNB7 445 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 ZNF662Q6ZS27 426 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 DHX32Q7L7V1 743 aaKnown RBP5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 CCDC84Q86UT8 332 aaPredicted RBP5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 CEP120Q8N960 986 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 TMEM102Q8N9M5 508 aaPredicted RBP5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 ASAP3Q8TDY4 903 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 BHMTQ93088 406 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 ANAPC16Q96DE5 110 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 ZFP42Q96MM3 310 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 NECAB3Q96P71 396 aaPredicted RBP5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 RBSNQ9H1K0 784 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 UBP1Q9NZI7 540 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 DNMT3LQ9UJW3 386 aa5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 MRPL42Q9Y6G3 142 aaKnown RBP5.43□□□□□ -1.54
RNU6-27P-201ENST00000516146 PDE2AO00408 941 aaPredicted RBP5.42□□□□□ -1.54
RNU6-27P-201ENST00000516146 ENC1O14682 589 aa5.42□□□□□ -1.54
RNU6-27P-201ENST00000516146 IBSPP21815 317 aaPredicted RBP5.42□□□□□ -1.54
RNU6-27P-201ENST00000516146 RNF187Q5TA31 235 aaPredicted RBP5.42□□□□□ -1.54
RNU6-27P-201ENST00000516146 COL13A1Q5TAT6 717 aaPredicted RBP5.42□□□□□ -1.54
RNU6-27P-201ENST00000516146 FAM196AQ6ZSG2 479 aa5.42□□□□□ -1.54
RNU6-27P-201ENST00000516146 LRP10Q7Z4F1 713 aa5.42□□□□□ -1.54
RNU6-27P-201ENST00000516146 TRIM46Q7Z4K8 759 aa5.42□□□□□ -1.54
RNU6-27P-201ENST00000516146 SLITRK4Q8IW52 837 aa5.42□□□□□ -1.54
RNU6-27P-201ENST00000516146 TRIM42Q8IWZ5 723 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms