RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 IFIT1BQ5T764 474 aaKnown RBP16.36■□□□□ 0.21
TRIO-218ENST00000512070 GBP6Q6ZN66 633 aa16.36■□□□□ 0.21
TRIO-218ENST00000512070 INTS4Q96HW7 963 aaKnown RBP16.36■□□□□ 0.21
TRIO-218ENST00000512070 CCDC114Q96M63 670 aa16.36■□□□□ 0.21
TRIO-218ENST00000512070 ANKRD36BQ8N2N9 1353 aa16.36■□□□□ 0.21
TRIO-218ENST00000512070 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
TRIO-218ENST00000512070 RTN1Q16799 776 aa16.36■□□□□ 0.21
TRIO-218ENST00000512070 MYD88Q99836 296 aa16.36■□□□□ 0.21
TRIO-218ENST00000512070 PAIP2Q9BPZ3 127 aaKnown RBP16.36■□□□□ 0.21
TRIO-218ENST00000512070 NKIRAS1Q9NYS0 192 aa16.36■□□□□ 0.21
TRIO-218ENST00000512070 MAP7Q14244 749 aa16.36■□□□□ 0.21
TRIO-218ENST00000512070 SLC26A6Q9BXS9 759 aa16.36■□□□□ 0.21
TRIO-218ENST00000512070 RTL1A6NKG5 1358 aa16.36■□□□□ 0.21
TRIO-218ENST00000512070 DNAI1Q9UI46 699 aa16.36■□□□□ 0.21
TRIO-218ENST00000512070 PLCG2P16885 1265 aa16.36■□□□□ 0.21
TRIO-218ENST00000512070 ACTN4O43707 911 aaKnown RBP16.35■□□□□ 0.21
TRIO-218ENST00000512070 PHACTR2O75167 634 aa16.35■□□□□ 0.21
TRIO-218ENST00000512070 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
TRIO-218ENST00000512070 GNA11P29992 359 aa16.35■□□□□ 0.21
TRIO-218ENST00000512070 CFAP58Q5T655 872 aa16.35■□□□□ 0.21
TRIO-218ENST00000512070 RRAGBQ5VZM2 374 aa16.35■□□□□ 0.21
TRIO-218ENST00000512070 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.35■□□□□ 0.21
TRIO-218ENST00000512070 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.35■□□□□ 0.21
TRIO-218ENST00000512070 SOS1Q07889 1333 aaPredicted RBP16.35■□□□□ 0.21
TRIO-218ENST00000512070 TPD52P55327 224 aaPredicted RBP16.35■□□□□ 0.21
TRIO-218ENST00000512070 NUCB1Q02818 461 aa16.35■□□□□ 0.21
TRIO-218ENST00000512070 FYB2Q5VWT5 728 aa16.35■□□□□ 0.21
TRIO-218ENST00000512070 TTC41PQ6P2S7 1318 aa16.35■□□□□ 0.21
TRIO-218ENST00000512070 CCDC144CPQ8IYA2 1237 aa16.35■□□□□ 0.21
TRIO-218ENST00000512070 IQCDQ96DY2 449 aa16.35■□□□□ 0.21
TRIO-218ENST00000512070 GBP1P32455 592 aa16.34■□□□□ 0.21
TRIO-218ENST00000512070 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
TRIO-218ENST00000512070 ATP6V0A2Q9Y487 856 aa16.34■□□□□ 0.21
TRIO-218ENST00000512070 CCDC63Q8NA47 563 aa16.34■□□□□ 0.21
TRIO-218ENST00000512070 ARHGAP25P42331 645 aa16.34■□□□□ 0.21
TRIO-218ENST00000512070 GUCY1B3Q02153 619 aa16.34■□□□□ 0.21
TRIO-218ENST00000512070 LMNTD2Q8IXW0 634 aa16.34■□□□□ 0.21
TRIO-218ENST00000512070 KIFAP3Q92845 792 aa16.34■□□□□ 0.21
TRIO-218ENST00000512070 OGFRQ9NZT2 677 aa16.34■□□□□ 0.21
TRIO-218ENST00000512070 BCAP29Q9UHQ4 241 aa16.34■□□□□ 0.21
TRIO-218ENST00000512070 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
TRIO-218ENST00000512070 CCDC152Q4G0S7 254 aa16.34■□□□□ 0.21
TRIO-218ENST00000512070 NUTM2AQ8IVF1 878 aaPredicted RBP16.34■□□□□ 0.21
TRIO-218ENST00000512070 ARL1P40616 181 aaPredicted RBP16.34■□□□□ 0.21
TRIO-218ENST00000512070 CDK13Q14004 1512 aaKnown RBP16.33■□□□□ 0.21
TRIO-218ENST00000512070 TRIM75PA6NK02 468 aa16.33■□□□□ 0.21
TRIO-218ENST00000512070 NAIPQ13075 1403 aa16.33■□□□□ 0.21
TRIO-218ENST00000512070 RAD50Q92878 1312 aa16.33■□□□□ 0.21
TRIO-218ENST00000512070 TSPY3P0CV98 308 aa16.33■□□□□ 0.2
TRIO-218ENST00000512070 TSPY8P0CW00 308 aa16.33■□□□□ 0.2
TRIO-218ENST00000512070 INF2Q27J81 1249 aa16.33■□□□□ 0.2
TRIO-218ENST00000512070 CTTNBP2Q8WZ74 1663 aa16.33■□□□□ 0.2
TRIO-218ENST00000512070 TSNAXIP1Q2TAA8 658 aa16.33■□□□□ 0.2
TRIO-218ENST00000512070 INTS8Q75QN2 995 aaKnown RBP16.33■□□□□ 0.2
TRIO-218ENST00000512070 CEP57Q86XR8 500 aa16.33■□□□□ 0.2
TRIO-218ENST00000512070 RASSF4Q9H2L5 321 aa16.33■□□□□ 0.2
TRIO-218ENST00000512070 PHLDB2Q86SQ0 1253 aa16.33■□□□□ 0.2
TRIO-218ENST00000512070 TAOK1Q7L7X3 1001 aa16.33■□□□□ 0.2
TRIO-218ENST00000512070 RGS22Q8NE09 1264 aa16.33■□□□□ 0.2
TRIO-218ENST00000512070 UBE2Q2Q8WVN8 375 aa16.33■□□□□ 0.2
TRIO-218ENST00000512070 GLT8D2Q9H1C3 349 aa16.33■□□□□ 0.2
TRIO-218ENST00000512070 ALG1Q9BT22 464 aa16.32■□□□□ 0.2
TRIO-218ENST00000512070 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
TRIO-218ENST00000512070 LIG1P18858 919 aa16.32■□□□□ 0.2
TRIO-218ENST00000512070 IRX3P78415 501 aaPredicted RBP16.32■□□□□ 0.2
TRIO-218ENST00000512070 MICALL1Q8N3F8 863 aa16.32■□□□□ 0.2
TRIO-218ENST00000512070 URB2Q14146 1524 aaKnown RBP16.32■□□□□ 0.2
TRIO-218ENST00000512070 NBPF8Q3BBV2 869 aa16.32■□□□□ 0.2
TRIO-218ENST00000512070 CERS3Q8IU89 383 aa16.32■□□□□ 0.2
TRIO-218ENST00000512070 SPDYE3A6NKU9 549 aa16.32■□□□□ 0.2
TRIO-218ENST00000512070 SEL1L2Q5TEA6 688 aa16.32■□□□□ 0.2
TRIO-218ENST00000512070 MIPOL1Q8TD10 442 aa16.32■□□□□ 0.2
TRIO-218ENST00000512070 MCMDC2Q4G0Z9 681 aa16.32■□□□□ 0.2
TRIO-218ENST00000512070 IRX4P78413 519 aa16.31■□□□□ 0.2
TRIO-218ENST00000512070 KIAA0586Q9BVV6 1533 aa16.31■□□□□ 0.2
TRIO-218ENST00000512070 RASSF2P50749 326 aa16.31■□□□□ 0.2
TRIO-218ENST00000512070 MCM10Q7L590 875 aa16.31■□□□□ 0.2
TRIO-218ENST00000512070 MAK16Q9BXY0 300 aaKnown RBP16.31■□□□□ 0.2
TRIO-218ENST00000512070 PPP1R7Q15435 360 aa16.31■□□□□ 0.2
TRIO-218ENST00000512070 ASIC1P78348 528 aa16.31■□□□□ 0.2
TRIO-218ENST00000512070 LDHAL6AQ6ZMR3 332 aa16.31■□□□□ 0.2
TRIO-218ENST00000512070 TBC1D31Q96DN5 1066 aa16.31■□□□□ 0.2
TRIO-218ENST00000512070 RBM28Q9NW13 759 aaKnown RBP16.31■□□□□ 0.2
TRIO-218ENST00000512070 A0A1B0GUL7 405 aa16.31■□□□□ 0.2
TRIO-218ENST00000512070 TMX3Q96JJ7 454 aa16.31■□□□□ 0.2
TRIO-218ENST00000512070 SPTLC2O15270 562 aa16.3■□□□□ 0.2
TRIO-218ENST00000512070 CASQ2O14958 399 aaPredicted RBP16.3■□□□□ 0.2
TRIO-218ENST00000512070 RUFY4Q6ZNE9 571 aa16.3■□□□□ 0.2
TRIO-218ENST00000512070 TFIP11Q9UBB9 837 aaKnown RBP16.3■□□□□ 0.2
TRIO-218ENST00000512070 TYRO3Q06418 890 aa16.3■□□□□ 0.2
TRIO-218ENST00000512070 SRGAP1Q7Z6B7 1085 aa16.3■□□□□ 0.2
TRIO-218ENST00000512070 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.3■□□□□ 0.2
TRIO-218ENST00000512070 FRMD4BQ9Y2L6 1034 aa16.3■□□□□ 0.2
TRIO-218ENST00000512070 VIMP08670 466 aaKnown RBP16.3■□□□□ 0.2
TRIO-218ENST00000512070 TRPC3Q13507 836 aa16.3■□□□□ 0.2
TRIO-218ENST00000512070 RPUSD2Q8IZ73 545 aaKnown RBP16.3■□□□□ 0.2
TRIO-218ENST00000512070 RAB3IPQ96QF0 476 aaPredicted RBP16.3■□□□□ 0.2
TRIO-218ENST00000512070 IQUBQ8NA54 791 aa16.3■□□□□ 0.2
TRIO-218ENST00000512070 UBL4BQ8N7F7 174 aa16.3■□□□□ 0.2
TRIO-218ENST00000512070 PLCB1Q9NQ66 1216 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms