RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CYP7A1P22680 504 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 CHRNA2Q15822 529 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 RNF187Q5TA31 235 aaPredicted RBP6.58□□□□□ -1.36
USP38-203ENST00000511739 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.58□□□□□ -1.36
USP38-203ENST00000511739 YTHDC2Q9H6S0 1430 aaKnown RBP6.58□□□□□ -1.36
USP38-203ENST00000511739 SYNMO15061 1565 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 PRDM15P57071 1507 aaPredicted RBP6.58□□□□□ -1.36
USP38-203ENST00000511739 GNAQP50148 359 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 TCIRG1Q13488 830 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 PROCA1Q8NCQ7 364 aaPredicted RBP6.58□□□□□ -1.36
USP38-203ENST00000511739 TRIM47Q96LD4 638 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 SLC26A6Q9BXS9 759 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 PANK2Q9BZ23 570 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 PFDN4Q9NQP4 134 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 ANAPC4Q9UJX5 808 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 ZBTB21Q9ULJ3 1066 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.58□□□□□ -1.36
USP38-203ENST00000511739 ATP2A1O14983 1001 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 METAP2P50579 478 aaKnown RBP eCLIP6.58□□□□□ -1.36
USP38-203ENST00000511739 TPD52P55327 224 aaPredicted RBP6.58□□□□□ -1.36
USP38-203ENST00000511739 GPR162Q16538 588 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 HEATR3Q7Z4Q2 680 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 MAATS1Q7Z4T9 603 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 CCDC155Q8N6L0 562 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 CCT6BQ92526 530 aa6.58□□□□□ -1.36
USP38-203ENST00000511739 SH2B1Q9NRF2 756 aaPredicted RBP6.58□□□□□ -1.36
USP38-203ENST00000511739 RIMBP2O15034 1052 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 TPTE2Q6XPS3 522 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 GSTA5Q7RTV2 222 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 SSH1Q8WYL5 1049 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 GOLGA1Q92805 767 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 TNPO1Q92973 898 aaKnown RBP6.57□□□□□ -1.36
USP38-203ENST00000511739 NSFL1CQ9UNZ2 370 aaKnown RBP6.57□□□□□ -1.36
USP38-203ENST00000511739 PTPRCP08575 1304 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 EIF6P56537 245 aaKnown RBP6.57□□□□□ -1.36
USP38-203ENST00000511739 AKNAD1Q5T1N1 836 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 IFIT1BQ5T764 474 aaKnown RBP6.57□□□□□ -1.36
USP38-203ENST00000511739 KANK3Q6NY19 840 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 MICALCLQ6ZW33 695 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 CCDC89Q8N998 374 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.57□□□□□ -1.36
USP38-203ENST00000511739 V9GYY5 206 aaPredicted RBP6.57□□□□□ -1.36
USP38-203ENST00000511739 LRRIQ1Q96JM4 1722 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 AKR1B10O60218 316 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 GMNNO75496 209 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 HAND2P61296 217 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 CKAP4Q07065 602 aaKnown RBP6.57□□□□□ -1.36
USP38-203ENST00000511739 KIF22Q14807 665 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 WTAPQ15007 396 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 PTPN14Q15678 1187 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 NAA16Q6N069 864 aaPredicted RBP6.57□□□□□ -1.36
USP38-203ENST00000511739 NCOA7Q8NI08 942 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 NIP7Q9Y221 180 aaKnown RBP eCLIP6.57□□□□□ -1.36
USP38-203ENST00000511739 ZFYVE16Q7Z3T8 1539 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 TICAM2Q86XR7 235 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 SH2D4AQ9H788 454 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 IQSEC3Q9UPP2 1182 aaPredicted RBP6.57□□□□□ -1.36
USP38-203ENST00000511739 GINS2Q9Y248 185 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 GOLGA6L9A6NEM1 432 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 PLCG2P16885 1265 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 PRPHP41219 470 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 NAPAP54920 295 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 CFAP58Q5T655 872 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 PAIP2Q9BPZ3 127 aaKnown RBP6.57□□□□□ -1.36
USP38-203ENST00000511739 CCDC77Q9BR77 488 aa6.57□□□□□ -1.36
USP38-203ENST00000511739 CTAGE5O15320 804 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 UBE3BQ7Z3V4 1068 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 CEP112Q8N8E3 955 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 GSDMBQ8TAX9 411 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 ESR2Q92731 530 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 PPP1R9BQ96SB3 815 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 CARD14Q9BXL6 1004 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 TRIM6Q9C030 488 aaPredicted RBP6.56□□□□□ -1.36
USP38-203ENST00000511739 CACYBPQ9HB71 228 aaKnown RBP6.56□□□□□ -1.36
USP38-203ENST00000511739 RMND1Q9NWS8 449 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 CGNQ9P2M7 1197 aaKnown RBP6.56□□□□□ -1.36
USP38-203ENST00000511739 NPATQ14207 1427 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 M0QZ92 97 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 SNRPA1P09661 255 aaKnown RBP6.56□□□□□ -1.36
USP38-203ENST00000511739 ZBTB16Q05516 673 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 FSIP1Q8NA03 581 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 ORC3Q9UBD5 711 aaPredicted RBP6.56□□□□□ -1.36
USP38-203ENST00000511739 CRCPO75575 148 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 CUL4BQ13620 913 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 NME9Q86XW9 330 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 TMEM57Q8N5G2 664 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 KRT23Q9C075 422 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 SPC25Q9HBM1 224 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 JADE2Q9NQC1 790 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 MKRN1Q9UHC7 482 aaKnown RBP6.56□□□□□ -1.36
USP38-203ENST00000511739 MAP3K2Q9Y2U5 619 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 RBM10P98175 930 aaKnown RBP6.56□□□□□ -1.36
USP38-203ENST00000511739 GABPAQ06546 454 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 RASA3Q14644 834 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 HS2ST1Q7LGA3 356 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 CCDC50Q8IVM0 306 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 ZCRB1Q8TBF4 217 aaKnown RBP6.56□□□□□ -1.36
USP38-203ENST00000511739 SLC4A4Q9Y6R1 1079 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 DYNC1I1O14576 645 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 GEN1Q17RS7 908 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms