RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 ITGA6P23229 1130 aa17.12■□□□□ 0.33
CLDND1-224ENST00000511667 ATP2B4P23634 1241 aa17.12■□□□□ 0.33
CLDND1-224ENST00000511667 HIRAP54198 1017 aaPredicted RBP17.12■□□□□ 0.33
CLDND1-224ENST00000511667 EPHA10Q5JZY3 1008 aa17.12■□□□□ 0.33
CLDND1-224ENST00000511667 DBNDD1Q9H9R9 158 aa17.12■□□□□ 0.33
CLDND1-224ENST00000511667 HPS5Q9UPZ3 1129 aa17.12■□□□□ 0.33
CLDND1-224ENST00000511667 PTPRCP08575 1304 aa17.12■□□□□ 0.33
CLDND1-224ENST00000511667 IRS2Q9Y4H2 1338 aa17.12■□□□□ 0.33
CLDND1-224ENST00000511667 MED23Q9ULK4 1368 aa17.12■□□□□ 0.33
CLDND1-224ENST00000511667 A0A1B0GUL6 1792 aa17.11■□□□□ 0.33
CLDND1-224ENST00000511667 TRPA1O75762 1119 aa17.11■□□□□ 0.33
CLDND1-224ENST00000511667 RPS12P25398 132 aaKnown RBP17.11■□□□□ 0.33
CLDND1-224ENST00000511667 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
CLDND1-224ENST00000511667 ZC3H15Q8WU90 426 aaKnown RBP17.11■□□□□ 0.33
CLDND1-224ENST00000511667 ZC3H12CQ9C0D7 883 aaKnown RBP17.11■□□□□ 0.33
CLDND1-224ENST00000511667 ANKIB1Q9P2G1 1089 aa17.11■□□□□ 0.33
CLDND1-224ENST00000511667 AKAP11Q9UKA4 1901 aa17.1■□□□□ 0.33
CLDND1-224ENST00000511667 RIMBP2O15034 1052 aa17.1■□□□□ 0.33
CLDND1-224ENST00000511667 PKN2Q16513 984 aaKnown RBP17.1■□□□□ 0.33
CLDND1-224ENST00000511667 GMLQ99445 158 aa17.1■□□□□ 0.33
CLDND1-224ENST00000511667 SRCIN1Q9C0H9 1055 aa17.1■□□□□ 0.33
CLDND1-224ENST00000511667 RNF186Q9NXI6 227 aa17.1■□□□□ 0.33
CLDND1-224ENST00000511667 SHTN1A0MZ66 631 aa17.09■□□□□ 0.33
CLDND1-224ENST00000511667 CCT4P50991 539 aaKnown RBP17.09■□□□□ 0.33
CLDND1-224ENST00000511667 DOK7Q18PE1 504 aa17.09■□□□□ 0.33
CLDND1-224ENST00000511667 RGMBQ6NW40 437 aa17.09■□□□□ 0.33
CLDND1-224ENST00000511667 C15orf52Q6ZUT6 534 aaKnown RBP17.09■□□□□ 0.33
CLDND1-224ENST00000511667 PODNQ7Z5L7 613 aa17.09■□□□□ 0.33
CLDND1-224ENST00000511667 CCDC102AQ96A19 550 aa17.09■□□□□ 0.33
CLDND1-224ENST00000511667 CNOT7Q9UIV1 285 aaKnown RBP17.09■□□□□ 0.33
CLDND1-224ENST00000511667 LEMD3Q9Y2U8 911 aa17.09■□□□□ 0.33
CLDND1-224ENST00000511667 FAM155AB1AL88 458 aaPredicted RBP17.08■□□□□ 0.32
CLDND1-224ENST00000511667 KIF23Q02241 960 aaPredicted RBP17.08■□□□□ 0.32
CLDND1-224ENST00000511667 RABL6Q3YEC7 729 aaPredicted RBP17.08■□□□□ 0.32
CLDND1-224ENST00000511667 TRPM4Q8TD43 1214 aa17.08■□□□□ 0.32
CLDND1-224ENST00000511667 ZBTB12Q9Y330 459 aaPredicted RBP17.08■□□□□ 0.32
CLDND1-224ENST00000511667 NBPF7P0C2Y1 421 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-224ENST00000511667 IGHMBP2P38935 993 aaKnown RBP17.07■□□□□ 0.32
CLDND1-224ENST00000511667 ZNF280AP59817 542 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-224ENST00000511667 LMBR1LQ6UX01 489 aa17.07■□□□□ 0.32
CLDND1-224ENST00000511667 TXNRD3Q86VQ6 643 aa17.07■□□□□ 0.32
CLDND1-224ENST00000511667 MICALL2Q8IY33 904 aa17.07■□□□□ 0.32
CLDND1-224ENST00000511667 ANKRD2Q9GZV1 360 aa17.07■□□□□ 0.32
CLDND1-224ENST00000511667 ANKRD18BA2A2Z9 1011 aa17.06■□□□□ 0.32
CLDND1-224ENST00000511667 AGBL3Q8NEM8 1001 aa17.06■□□□□ 0.32
CLDND1-224ENST00000511667 SUCLG2Q96I99 432 aa17.06■□□□□ 0.32
CLDND1-224ENST00000511667 EGFRP00533 1210 aa17.05■□□□□ 0.32
CLDND1-224ENST00000511667 CHRNDQ07001 517 aa17.05■□□□□ 0.32
CLDND1-224ENST00000511667 IFIT5Q13325 482 aaKnown RBP17.05■□□□□ 0.32
CLDND1-224ENST00000511667 RSBN1LQ6PCB5 846 aaPredicted RBP17.05■□□□□ 0.32
CLDND1-224ENST00000511667 MIER1Q8N108 512 aa17.05■□□□□ 0.32
CLDND1-224ENST00000511667 BCL2L13Q9BXK5 485 aa17.05■□□□□ 0.32
CLDND1-224ENST00000511667 USP44Q9H0E7 712 aa17.05■□□□□ 0.32
CLDND1-224ENST00000511667 ZNF804BA4D1E1 1349 aa17.04■□□□□ 0.32
CLDND1-224ENST00000511667 H7C1D1 291 aa17.04■□□□□ 0.32
CLDND1-224ENST00000511667 KLRK1P26718 216 aa17.04■□□□□ 0.32
CLDND1-224ENST00000511667 FXR1P51114 621 aaKnown RBP eCLIP17.04■□□□□ 0.32
CLDND1-224ENST00000511667 ZNF157P51786 506 aaPredicted RBP17.04■□□□□ 0.32
CLDND1-224ENST00000511667 DACT2Q5SW24 774 aa17.04■□□□□ 0.32
CLDND1-224ENST00000511667 SLC4A10Q6U841 1118 aa17.04■□□□□ 0.32
CLDND1-224ENST00000511667 ANKRD44Q8N8A2 993 aa17.04■□□□□ 0.32
CLDND1-224ENST00000511667 C2orf69Q8N8R5 385 aa17.04■□□□□ 0.32
CLDND1-224ENST00000511667 MPHOSPH8Q99549 860 aa17.04■□□□□ 0.32
CLDND1-224ENST00000511667 COA1Q9GZY4 146 aa17.04■□□□□ 0.32
CLDND1-224ENST00000511667 GBA2Q9HCG7 927 aaPredicted RBP17.04■□□□□ 0.32
CLDND1-224ENST00000511667 C9orf78Q9NZ63 289 aaPredicted RBP17.04■□□□□ 0.32
CLDND1-224ENST00000511667 DIEXFQ68CQ4 756 aaKnown RBP17.03■□□□□ 0.32
CLDND1-224ENST00000511667 USP48Q86UV5 1035 aa17.03■□□□□ 0.32
CLDND1-224ENST00000511667 HDAC9Q9UKV0 1011 aa17.03■□□□□ 0.32
CLDND1-224ENST00000511667 USP17L3A6NCW0 530 aa17.02■□□□□ 0.32
CLDND1-224ENST00000511667 USP17L4A6NCW7 530 aa17.02■□□□□ 0.32
CLDND1-224ENST00000511667 RARSP54136 660 aaKnown RBP17.02■□□□□ 0.32
CLDND1-224ENST00000511667 STRIP1Q5VSL9 837 aa17.02■□□□□ 0.32
CLDND1-224ENST00000511667 USP17L1Q7RTZ2 530 aa17.02■□□□□ 0.32
CLDND1-224ENST00000511667 SAMD7Q7Z3H4 446 aa17.02■□□□□ 0.32
CLDND1-224ENST00000511667 REM2Q8IYK8 340 aaPredicted RBP17.02■□□□□ 0.32
CLDND1-224ENST00000511667 POLR2AP24928 1970 aaKnown RBP17.02■□□□□ 0.31
CLDND1-224ENST00000511667 CSRNP1Q96S65 589 aa17.01■□□□□ 0.31
CLDND1-224ENST00000511667 BICC1Q9H694 974 aaKnown RBP17.01■□□□□ 0.31
CLDND1-224ENST00000511667 SMC4Q9NTJ3 1288 aa17.01■□□□□ 0.31
CLDND1-224ENST00000511667 RIPOR2Q9Y4F9 1068 aa17.01■□□□□ 0.31
CLDND1-224ENST00000511667 SNAP23O00161 211 aa17■□□□□ 0.31
CLDND1-224ENST00000511667 SLC10A3P09131 477 aa17■□□□□ 0.31
CLDND1-224ENST00000511667 MMP14P50281 582 aa17■□□□□ 0.31
CLDND1-224ENST00000511667 CCDC57Q2TAC2 916 aa17■□□□□ 0.31
CLDND1-224ENST00000511667 ARHGAP45Q92619 1136 aa17■□□□□ 0.31
CLDND1-224ENST00000511667 ZNF594Q96JF6 807 aaPredicted RBP17■□□□□ 0.31
CLDND1-224ENST00000511667 TAF5LO75529 589 aa16.99■□□□□ 0.31
CLDND1-224ENST00000511667 IL1R1P14778 569 aa16.99■□□□□ 0.31
CLDND1-224ENST00000511667 TBC1D10BQ4KMP7 808 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-224ENST00000511667 LDHAL6AQ6ZMR3 332 aa16.99■□□□□ 0.31
CLDND1-224ENST00000511667 KRT26Q7Z3Y9 468 aa16.99■□□□□ 0.31
CLDND1-224ENST00000511667 USP17L8P0C7I0 530 aa16.98■□□□□ 0.31
CLDND1-224ENST00000511667 RFX5P48382 616 aaPredicted RBP16.98■□□□□ 0.31
CLDND1-224ENST00000511667 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
CLDND1-224ENST00000511667 FBXO46Q6PJ61 603 aaPredicted RBP16.98■□□□□ 0.31
CLDND1-224ENST00000511667 ZBED3Q96IU2 234 aaPredicted RBP16.98■□□□□ 0.31
CLDND1-224ENST00000511667 PUS3Q9BZE2 481 aaKnown RBP16.98■□□□□ 0.31
CLDND1-224ENST00000511667 CD209Q9NNX6 404 aa16.98■□□□□ 0.31
CLDND1-224ENST00000511667 NOB1Q9ULX3 412 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms