RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 TRIM47Q96LD4 638 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 RPRD2Q5VT52 1461 aaKnown RBP9.45□□□□□ -0.9
HTT-208ENST00000510626 ANKRD36BQ8N2N9 1353 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 STARD3NLO95772 234 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 NAP1L4Q99733 375 aaKnown RBP9.45□□□□□ -0.9
HTT-208ENST00000510626 NAPGQ99747 312 aaPredicted RBP9.45□□□□□ -0.9
HTT-208ENST00000510626 UTP11Q9Y3A2 253 aaKnown RBP9.45□□□□□ -0.9
HTT-208ENST00000510626 GNAT2P19087 354 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 TRPC3Q13507 836 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 GOLGA8AA7E2F4 631 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 GMNNO75496 209 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 SYCE1Q8N0S2 351 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 CCDC51Q96ER9 411 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 USP16Q9Y5T5 823 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 CABP4P57796 275 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 CAVIN4Q5BKX8 364 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 LRCH2Q5VUJ6 765 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 VCX3AQ9NNX9 186 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 C8orf34Q49A92 452 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 NDUFAB1O14561 156 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 AP1ARQ63HQ0 302 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 PDE4BQ07343 736 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 MAP7D1Q3KQU3 841 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 PLCD3Q8N3E9 789 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 RTL1A6NKG5 1358 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 ARHGAP6O43182 974 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 IARSP41252 1262 aaKnown RBP9.44□□□□□ -0.9
HTT-208ENST00000510626 APOBRQ0VD83 1088 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 ZNF365Q70YC5 407 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 FERMT3Q86UX7 667 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 PCK1P35558 622 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 MYO1AQ9UBC5 1043 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 KDM5DQ9BY66 1539 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 CALM1P0DP23 149 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 CALM2P0DP24 149 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 CALM3P0DP25 149 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 ZMAT2Q96NC0 199 aaKnown RBP9.44□□□□□ -0.9
HTT-208ENST00000510626 BAG1Q99933 345 aaPredicted RBP9.44□□□□□ -0.9
HTT-208ENST00000510626 ZKSCAN8Q15776 578 aaPredicted RBP9.44□□□□□ -0.9
HTT-208ENST00000510626 MFSD6Q6ZSS7 791 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 AFAP1L2Q8N4X5 818 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 SPAG5Q96R06 1193 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 Q9H521 79 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 TBCAO75347 108 aaKnown RBP9.44□□□□□ -0.9
HTT-208ENST00000510626 PAK2Q13177 524 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 ESYT1Q9BSJ8 1104 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 PPP2R5BQ15173 497 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 RAB11FIP4Q86YS3 637 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 CEP104O60308 925 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 DEUP1Q05D60 604 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 FERMT2Q96AC1 680 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 HMGXB3Q12766 1538 aa9.44□□□□□ -0.9
HTT-208ENST00000510626 RPL13P26373 211 aaKnown RBP9.43□□□□□ -0.9
HTT-208ENST00000510626 METAP2P50579 478 aaKnown RBP eCLIP9.43□□□□□ -0.9
HTT-208ENST00000510626 EFCAB13Q8IY85 973 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 ZNF652Q9Y2D9 606 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 RNASELQ05823 741 aaKnown RBP9.43□□□□□ -0.9
HTT-208ENST00000510626 TMTC1Q8IUR5 882 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 RUNDC3BQ96NL0 473 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 NOX5Q96PH1 765 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 PARP2Q9UGN5 583 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 CCDC61Q9Y6R9 512 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 MAPK8IP2Q13387 824 aaPredicted RBP9.43□□□□□ -0.9
HTT-208ENST00000510626 GIMAP6Q6P9H5 292 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 PRAM1Q96QH2 718 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 SPTLC2O15270 562 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 INTS8Q75QN2 995 aaKnown RBP9.43□□□□□ -0.9
HTT-208ENST00000510626 GOLGA6BA6NDN3 693 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 SSH2Q76I76 1423 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 UBL4BQ8N7F7 174 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 IQUBQ8NA54 791 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.43□□□□□ -0.9
HTT-208ENST00000510626 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.43□□□□□ -0.9
HTT-208ENST00000510626 RAB3IL1Q8TBN0 382 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 SYNJ1O43426 1573 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 CALCOCO2Q13137 446 aa9.43□□□□□ -0.9
HTT-208ENST00000510626 GABPB2Q8TAK5 448 aaPredicted RBP9.43□□□□□ -0.9
HTT-208ENST00000510626 IFIT5Q13325 482 aaKnown RBP9.42□□□□□ -0.9
HTT-208ENST00000510626 DTNBP1Q96EV8 351 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 RTL9Q8NET4 1388 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 UHRF1BP1Q6BDS2 1440 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 ALDH1L1O75891 902 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 ZNF853P0CG23 659 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 GBP5Q96PP8 586 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 ZWINTO95229 277 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 MXRA7P84157 204 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 STAT6P42226 847 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 CFAP157Q5JU67 520 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 TRIM75PA6NK02 468 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 IFIT3O14879 490 aaKnown RBP9.42□□□□□ -0.9
HTT-208ENST00000510626 SLFNL1Q499Z3 407 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 GLT8D2Q9H1C3 349 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 SLC12A5Q9H2X9 1139 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 PARD3Q8TEW0 1356 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 MATR3P43243 847 aaKnown RBP eCLIP9.42□□□□□ -0.9
HTT-208ENST00000510626 CCDC160A6NGH7 325 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 SDSP20132 328 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 UBXN1Q04323 297 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 NEDD9Q14511 834 aa9.42□□□□□ -0.9
HTT-208ENST00000510626 SIL1Q9H173 461 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms