RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 POLA2Q14181 598 aa21.51■■□□□ 1.03
CLDND1-221ENST00000510541 STRIP1Q5VSL9 837 aa21.51■■□□□ 1.03
CLDND1-221ENST00000510541 USP50Q70EL3 339 aaPredicted RBP21.51■■□□□ 1.03
CLDND1-221ENST00000510541 ITPRIPQ8IWB1 547 aa21.51■■□□□ 1.03
CLDND1-221ENST00000510541 SSH3Q8TE77 659 aa21.51■■□□□ 1.03
CLDND1-221ENST00000510541 PUS3Q9BZE2 481 aaKnown RBP21.51■■□□□ 1.03
CLDND1-221ENST00000510541 DBNDD1Q9H9R9 158 aa21.51■■□□□ 1.03
CLDND1-221ENST00000510541 FGFR2P21802 821 aa21.5■■□□□ 1.03
CLDND1-221ENST00000510541 LMOD1P29536 600 aaPredicted RBP21.5■■□□□ 1.03
CLDND1-221ENST00000510541 KCNJ4P48050 445 aa21.5■■□□□ 1.03
CLDND1-221ENST00000510541 ATP8B2P98198 1209 aa21.5■■□□□ 1.03
CLDND1-221ENST00000510541 LRRC24Q50LG9 513 aa21.5■■□□□ 1.03
CLDND1-221ENST00000510541 SMC1BQ8NDV3 1235 aa21.5■■□□□ 1.03
CLDND1-221ENST00000510541 GMLQ99445 158 aa21.5■■□□□ 1.03
CLDND1-221ENST00000510541 USP17L3A6NCW0 530 aa21.49■■□□□ 1.03
CLDND1-221ENST00000510541 USP17L4A6NCW7 530 aa21.49■■□□□ 1.03
CLDND1-221ENST00000510541 G3V3G9 751 aa21.49■■□□□ 1.03
CLDND1-221ENST00000510541 PSMD14O00487 310 aa21.49■■□□□ 1.03
CLDND1-221ENST00000510541 SRGAP3O43295 1099 aa21.49■■□□□ 1.03
CLDND1-221ENST00000510541 EPHX2P34913 555 aa21.49■■□□□ 1.03
CLDND1-221ENST00000510541 DCAF8Q5TAQ9 597 aa21.49■■□□□ 1.03
CLDND1-221ENST00000510541 USP17L1Q7RTZ2 530 aa21.49■■□□□ 1.03
CLDND1-221ENST00000510541 ZNF804AQ7Z570 1209 aa21.49■■□□□ 1.03
CLDND1-221ENST00000510541 TXNRD3Q86VQ6 643 aa21.49■■□□□ 1.03
CLDND1-221ENST00000510541 LDHDQ86WU2 507 aa21.49■■□□□ 1.03
CLDND1-221ENST00000510541 CD209Q9NNX6 404 aa21.49■■□□□ 1.03
CLDND1-221ENST00000510541 WTIPA6NIX2 430 aaPredicted RBP21.48■■□□□ 1.03
CLDND1-221ENST00000510541 TAF5LO75529 589 aa21.48■■□□□ 1.03
CLDND1-221ENST00000510541 RAD17O75943 681 aa21.48■■□□□ 1.03
CLDND1-221ENST00000510541 PUM3Q15397 648 aaKnown RBP21.48■■□□□ 1.03
CLDND1-221ENST00000510541 METTL24Q5JXM2 366 aa21.48■■□□□ 1.03
CLDND1-221ENST00000510541 ZC3H15Q8WU90 426 aaKnown RBP21.48■■□□□ 1.03
CLDND1-221ENST00000510541 ADARB2Q9NS39 739 aaKnown RBP21.48■■□□□ 1.03
CLDND1-221ENST00000510541 ZBTB40Q9NUA8 1239 aa21.48■■□□□ 1.03
CLDND1-221ENST00000510541 PGAP2Q9UHJ9 254 aa21.48■■□□□ 1.03
CLDND1-221ENST00000510541 ZNF646O15015 1829 aaPredicted RBP21.48■■□□□ 1.03
CLDND1-221ENST00000510541 DOK7Q18PE1 504 aa21.47■■□□□ 1.03
CLDND1-221ENST00000510541 RSBN1LQ6PCB5 846 aaPredicted RBP21.47■■□□□ 1.03
CLDND1-221ENST00000510541 FBXO33Q7Z6M2 555 aa21.47■■□□□ 1.03
CLDND1-221ENST00000510541 PANK1Q8TE04 598 aa21.47■■□□□ 1.03
CLDND1-221ENST00000510541 LPIN2Q92539 896 aa21.47■■□□□ 1.03
CLDND1-221ENST00000510541 NOP58Q9Y2X3 529 aaKnown RBP21.47■■□□□ 1.03
CLDND1-221ENST00000510541 GJA3Q9Y6H8 435 aa21.47■■□□□ 1.03
CLDND1-221ENST00000510541 SASH1O94885 1247 aa21.46■■□□□ 1.03
CLDND1-221ENST00000510541 GMPSP49915 693 aaPredicted RBP21.46■■□□□ 1.03
CLDND1-221ENST00000510541 ZNF280AP59817 542 aaPredicted RBP21.46■■□□□ 1.03
CLDND1-221ENST00000510541 HELBQ8NG08 1087 aaPredicted RBP21.46■■□□□ 1.03
CLDND1-221ENST00000510541 TDRD7Q8NHU6 1098 aaKnown RBP21.46■■□□□ 1.03
CLDND1-221ENST00000510541 GPR101Q96P66 508 aaPredicted RBP21.46■■□□□ 1.03
CLDND1-221ENST00000510541 CEP126Q9P2H0 1117 aa21.46■■□□□ 1.03
CLDND1-221ENST00000510541 FAM205AQ6ZU69 1335 aa21.46■■□□□ 1.03
CLDND1-221ENST00000510541 IFIT1P09914 478 aaKnown RBP21.45■■□□□ 1.02
CLDND1-221ENST00000510541 DACT2Q5SW24 774 aa21.45■■□□□ 1.02
CLDND1-221ENST00000510541 RPAP2Q8IXW5 612 aaPredicted RBP21.45■■□□□ 1.02
CLDND1-221ENST00000510541 KLHDC4Q8TBB5 520 aa21.45■■□□□ 1.02
CLDND1-221ENST00000510541 FAM84BQ96KN1 310 aaPredicted RBP21.45■■□□□ 1.02
CLDND1-221ENST00000510541 H7C1D1 291 aa21.44■■□□□ 1.02
CLDND1-221ENST00000510541 HIBADHP31937 336 aaKnown RBP21.44■■□□□ 1.02
CLDND1-221ENST00000510541 CHADLQ6NUI6 762 aa21.44■■□□□ 1.02
CLDND1-221ENST00000510541 CNOT7Q9UIV1 285 aaKnown RBP21.44■■□□□ 1.02
CLDND1-221ENST00000510541 PNMA6EA0A0J9YXQ4 647 aa21.43■■□□□ 1.02
CLDND1-221ENST00000510541 KLRK1P26718 216 aa21.43■■□□□ 1.02
CLDND1-221ENST00000510541 EPS15P42566 896 aa21.43■■□□□ 1.02
CLDND1-221ENST00000510541 CAVIN4Q5BKX8 364 aa21.43■■□□□ 1.02
CLDND1-221ENST00000510541 TTLL5Q6EMB2 1281 aa21.43■■□□□ 1.02
CLDND1-221ENST00000510541 GPR108Q9NPR9 543 aa21.43■■□□□ 1.02
CLDND1-221ENST00000510541 KCNQ5Q9NR82 932 aa21.43■■□□□ 1.02
CLDND1-221ENST00000510541 AKAP2Q9Y2D5 859 aa21.43■■□□□ 1.02
CLDND1-221ENST00000510541 AAMPQ13685 434 aa21.42■■□□□ 1.02
CLDND1-221ENST00000510541 CEP85Q6P2H3 762 aa21.42■■□□□ 1.02
CLDND1-221ENST00000510541 SNAP23O00161 211 aa21.41■■□□□ 1.02
CLDND1-221ENST00000510541 SLC5A1P13866 664 aa21.41■■□□□ 1.02
CLDND1-221ENST00000510541 COG6Q9Y2V7 657 aa21.41■■□□□ 1.02
CLDND1-221ENST00000510541 PDS5AQ29RF7 1337 aaKnown RBP21.4■■□□□ 1.02
CLDND1-221ENST00000510541 SEMA3EO15041 775 aa21.4■■□□□ 1.02
CLDND1-221ENST00000510541 PLIN1O60240 522 aa21.4■■□□□ 1.02
CLDND1-221ENST00000510541 MICALL2Q8IY33 904 aa21.4■■□□□ 1.02
CLDND1-221ENST00000510541 PA2G4Q9UQ80 394 aaKnown RBP21.4■■□□□ 1.02
CLDND1-221ENST00000510541 SUGT1Q9Y2Z0 365 aa21.4■■□□□ 1.02
CLDND1-221ENST00000510541 ARAP2Q8WZ64 1704 aa21.39■■□□□ 1.01
CLDND1-221ENST00000510541 USP17L8P0C7I0 530 aa21.39■■□□□ 1.01
CLDND1-221ENST00000510541 HSPA6P17066 643 aa21.39■■□□□ 1.01
CLDND1-221ENST00000510541 RRP1P56182 461 aaKnown RBP21.39■■□□□ 1.01
CLDND1-221ENST00000510541 TBC1D22AQ8WUA7 517 aa21.39■■□□□ 1.01
CLDND1-221ENST00000510541 MRIQ9BWK5 157 aa21.39■■□□□ 1.01
CLDND1-221ENST00000510541 PASKQ96RG2 1323 aa21.38■■□□□ 1.01
CLDND1-221ENST00000510541 HMMRO75330 724 aa21.38■■□□□ 1.01
CLDND1-221ENST00000510541 G3BP1Q13283 466 aaKnown RBP eCLIP21.38■■□□□ 1.01
CLDND1-221ENST00000510541 ATP2B3Q16720 1220 aa21.38■■□□□ 1.01
CLDND1-221ENST00000510541 HSP90AB4PQ58FF6 505 aa21.38■■□□□ 1.01
CLDND1-221ENST00000510541 MTMR14Q8NCE2 650 aa21.38■■□□□ 1.01
CLDND1-221ENST00000510541 ZBTB12Q9Y330 459 aaPredicted RBP21.38■■□□□ 1.01
CLDND1-221ENST00000510541 IGSF3O75054 1194 aa21.37■■□□□ 1.01
CLDND1-221ENST00000510541 ITGBL1O95965 494 aaPredicted RBP21.37■■□□□ 1.01
CLDND1-221ENST00000510541 OGFOD1Q8N543 542 aa21.37■■□□□ 1.01
CLDND1-221ENST00000510541 YTHDC1Q96MU7 727 aaKnown RBP21.37■■□□□ 1.01
CLDND1-221ENST00000510541 SIL1Q9H173 461 aa21.37■■□□□ 1.01
CLDND1-221ENST00000510541 PITPNM2Q9BZ72 1349 aa21.36■■□□□ 1.01
CLDND1-221ENST00000510541 GTF2IP78347 998 aa21.36■■□□□ 1.01
CLDND1-221ENST00000510541 VPS37DQ86XT2 251 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms