RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 STIP1P31948 543 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 KBTBD12Q3ZCT8 623 aa12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 SLC30A9Q6PML9 568 aa12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 GPR161Q8N6U8 529 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 UBXN4Q92575 508 aa12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 EPAS1Q99814 870 aa12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 RETREG1Q9H6L5 497 aa12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 ARFGAP3Q9NP61 516 aa12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 ZCCHC17Q9NP64 241 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 ZDHHC9Q9Y397 364 aa12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 BOLA1Q9Y3E2 137 aa12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 AQRO60306 1485 aaKnown RBP eCLIP12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 CD2BP2O95400 341 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 MX1P20591 662 aa12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 SLC4A8Q2Y0W8 1093 aa12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 LONRF3Q496Y0 759 aa12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 FAM114A1Q8IWE2 563 aa12.41□□□□□ -0.42
PDLIM5-210ENST00000508216 FHOD3Q2V2M9 1422 aa12.4□□□□□ -0.42
PDLIM5-210ENST00000508216 CCDC151A5D8V7 595 aa12.4□□□□□ -0.42
PDLIM5-210ENST00000508216 SLC27A2O14975 620 aa12.4□□□□□ -0.42
PDLIM5-210ENST00000508216 EZRP15311 586 aaKnown RBP12.4□□□□□ -0.42
PDLIM5-210ENST00000508216 CCDC38Q502W7 563 aa12.4□□□□□ -0.42
PDLIM5-210ENST00000508216 YTHDF3Q7Z739 585 aaKnown RBP12.4□□□□□ -0.42
PDLIM5-210ENST00000508216 KCTD17Q8N5Z5 321 aa12.4□□□□□ -0.42
PDLIM5-210ENST00000508216 SMYD1Q8NB12 490 aa12.4□□□□□ -0.42
PDLIM5-210ENST00000508216 FAM71BQ8TC56 605 aa12.4□□□□□ -0.42
PDLIM5-210ENST00000508216 TMEM121BQ9BXQ6 578 aaPredicted RBP12.4□□□□□ -0.42
PDLIM5-210ENST00000508216 CORO1CQ9ULV4 474 aaPredicted RBP12.4□□□□□ -0.42
PDLIM5-210ENST00000508216 MTMR7Q9Y216 660 aa12.4□□□□□ -0.42
PDLIM5-210ENST00000508216 TOP2BQ02880 1626 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 G3V3G9 751 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 GOLGA6L19H0YKK7 550 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 SHOX2O60902 331 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 TADA3O75528 432 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 TPPPO94811 219 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 SMTNP53814 917 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 DHX8Q14562 1220 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 BRD3Q15059 726 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 FBXW10Q5XX13 1052 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 NOL8Q76FK4 1167 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 MICALL2Q8IY33 904 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 LMBR1Q8WVP7 490 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 RBM41Q96IZ5 413 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 FAM81BQ96LP2 452 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 PCDHGC5Q9Y5F6 944 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 DISP1Q96F81 1524 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 KDM5DQ9BY66 1539 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 TTC41PQ6P2S7 1318 aa12.39□□□□□ -0.43
PDLIM5-210ENST00000508216 CCDC175P0C221 793 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 CYP11B2P19099 503 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 HOXA10P31260 410 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 INPP5BP32019 993 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 SLC8A1P32418 973 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 APOBRQ0VD83 1088 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 SOGA3Q5TF21 947 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 AFAP1Q8N556 730 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 SPDL1Q96EA4 605 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 CLTCL1P53675 1640 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 PHLPP2Q6ZVD8 1323 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 H3BQF6 201 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 AP5Z1O43299 807 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 HCLS1P14317 486 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 CLPPQ16740 277 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 LRRC23Q53EV4 343 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 MAMSTRQ6ZN01 415 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 PLA2G4DQ86XP0 818 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 L3MBTL2Q969R5 705 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 PAGR1Q9BTK6 254 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 GMEB1Q9Y692 573 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 FAM169AQ9Y6X4 670 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 USP47Q96K76 1375 aa12.38□□□□□ -0.43
PDLIM5-210ENST00000508216 PPIP5K1Q6PFW1 1433 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 EBAG9O00559 213 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 KRT38O76015 456 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 LIG3P49916 1009 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 KIAA0753Q2KHM9 967 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 CCDC57Q2TAC2 916 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 BMP2KLQ5H9B9 411 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 GORABQ5T7V8 394 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 CATIPQ7Z7H3 387 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 GBP7Q8N8V2 638 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 ERMNQ8TAM6 284 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 LZICQ8WZA0 190 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 RSRC1Q96IZ7 334 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 DHRS1Q96LJ7 313 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 CCDC114Q96M63 670 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 AGBL1Q96MI9 1066 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 TRAIPQ9BWF2 469 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 ARHGEF10LQ9HCE6 1279 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 QPCTLQ9NXS2 382 aa12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 CTDP1Q9Y5B0 961 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-210ENST00000508216 EIF4BP23588 611 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-210ENST00000508216 PAPOLAP51003 745 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-210ENST00000508216 TUBB4BP68371 445 aa12.36□□□□□ -0.43
PDLIM5-210ENST00000508216 MPP3Q13368 585 aa12.36□□□□□ -0.43
PDLIM5-210ENST00000508216 KCNB1Q14721 858 aa12.36□□□□□ -0.43
PDLIM5-210ENST00000508216 TBC1D10BQ4KMP7 808 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-210ENST00000508216 ARMC3Q5W041 872 aa12.36□□□□□ -0.43
PDLIM5-210ENST00000508216 SYNE3Q6ZMZ3 975 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms