RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 B4E1Z4 1266 aa11.19□□□□□ -0.62
PHF3-208ENST00000506783 LETM1O95202 739 aaPredicted RBP11.19□□□□□ -0.62
PHF3-208ENST00000506783 CGNQ9P2M7 1197 aaKnown RBP11.19□□□□□ -0.62
PHF3-208ENST00000506783 MYO5BQ9ULV0 1848 aa11.19□□□□□ -0.62
PHF3-208ENST00000506783 NRXN1Q9ULB1 1477 aa11.19□□□□□ -0.62
PHF3-208ENST00000506783 CCDC69A6NI79 296 aa11.19□□□□□ -0.62
PHF3-208ENST00000506783 ZNF500O60304 480 aaPredicted RBP11.19□□□□□ -0.62
PHF3-208ENST00000506783 URI1O94763 535 aaPredicted RBP11.19□□□□□ -0.62
PHF3-208ENST00000506783 IFNL2Q8IZJ0 200 aa11.19□□□□□ -0.62
PHF3-208ENST00000506783 CEP170BQ9Y4F5 1589 aaPredicted RBP11.19□□□□□ -0.62
PHF3-208ENST00000506783 DYNC1I1O14576 645 aa11.19□□□□□ -0.62
PHF3-208ENST00000506783 POLA2Q14181 598 aa11.19□□□□□ -0.62
PHF3-208ENST00000506783 SAMD1Q6SPF0 538 aaPredicted RBP11.19□□□□□ -0.62
PHF3-208ENST00000506783 STOX1Q6ZVD7 989 aa11.19□□□□□ -0.62
PHF3-208ENST00000506783 TRMT112Q9UI30 125 aaKnown RBP11.19□□□□□ -0.62
PHF3-208ENST00000506783 CLIC4Q9Y696 253 aa11.19□□□□□ -0.62
PHF3-208ENST00000506783 HIP1O00291 1037 aa11.18□□□□□ -0.62
PHF3-208ENST00000506783 ZNF213O14771 459 aa11.18□□□□□ -0.62
PHF3-208ENST00000506783 PRC1O43663 620 aa11.18□□□□□ -0.62
PHF3-208ENST00000506783 AFMP43652 599 aa11.18□□□□□ -0.62
PHF3-208ENST00000506783 TRIM29Q14134 588 aa11.18□□□□□ -0.62
PHF3-208ENST00000506783 TRMT44Q8IYL2 757 aaKnown RBP11.18□□□□□ -0.62
PHF3-208ENST00000506783 SLC26A6Q9BXS9 759 aa11.18□□□□□ -0.62
PHF3-208ENST00000506783 MAPK8IP1Q9UQF2 711 aa11.18□□□□□ -0.62
PHF3-208ENST00000506783 CDK12Q9NYV4 1490 aaPredicted RBP11.18□□□□□ -0.62
PHF3-208ENST00000506783 RIMS1Q86UR5 1692 aaKnown RBP11.18□□□□□ -0.62
PHF3-208ENST00000506783 HMGN5P82970 282 aaKnown RBP11.18□□□□□ -0.62
PHF3-208ENST00000506783 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
PHF3-208ENST00000506783 SYT10Q6XYQ8 523 aa11.18□□□□□ -0.62
PHF3-208ENST00000506783 ZCRB1Q8TBF4 217 aaKnown RBP11.18□□□□□ -0.62
PHF3-208ENST00000506783 GTF3C6Q969F1 213 aa11.18□□□□□ -0.62
PHF3-208ENST00000506783 PLIN2Q99541 437 aa11.18□□□□□ -0.62
PHF3-208ENST00000506783 TTC41PQ6P2S7 1318 aa11.18□□□□□ -0.62
PHF3-208ENST00000506783 FKBP15Q5T1M5 1219 aa11.18□□□□□ -0.62
PHF3-208ENST00000506783 KCNJ14Q9UNX9 436 aa11.18□□□□□ -0.62
PHF3-208ENST00000506783 CTDSPL2Q05D32 466 aa11.17□□□□□ -0.62
PHF3-208ENST00000506783 SCARF1Q14162 830 aa11.17□□□□□ -0.62
PHF3-208ENST00000506783 ZC3H13Q5T200 1668 aaKnown RBP11.17□□□□□ -0.62
PHF3-208ENST00000506783 CEP135Q66GS9 1140 aa11.17□□□□□ -0.62
PHF3-208ENST00000506783 VPS37DQ86XT2 251 aa11.17□□□□□ -0.62
PHF3-208ENST00000506783 CEP57L1Q8IYX8 460 aa11.17□□□□□ -0.62
PHF3-208ENST00000506783 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
PHF3-208ENST00000506783 E7EWF7 191 aa11.17□□□□□ -0.62
PHF3-208ENST00000506783 NCBP3Q53F19 620 aaKnown RBP11.17□□□□□ -0.62
PHF3-208ENST00000506783 GRAMD1CQ8IYS0 662 aa11.17□□□□□ -0.62
PHF3-208ENST00000506783 METTL22Q9BUU2 404 aaPredicted RBP11.17□□□□□ -0.62
PHF3-208ENST00000506783 CWC25Q9NXE8 425 aaPredicted RBP11.17□□□□□ -0.62
PHF3-208ENST00000506783 DNAI1Q9UI46 699 aa11.17□□□□□ -0.62
PHF3-208ENST00000506783 TDO2P48775 406 aa11.17□□□□□ -0.62
PHF3-208ENST00000506783 IFIT5Q13325 482 aaKnown RBP11.17□□□□□ -0.62
PHF3-208ENST00000506783 ELF2Q15723 593 aa11.17□□□□□ -0.62
PHF3-208ENST00000506783 IMMTQ16891 758 aaKnown RBP11.17□□□□□ -0.62
PHF3-208ENST00000506783 LONRF3Q496Y0 759 aa11.17□□□□□ -0.62
PHF3-208ENST00000506783 TMOD3Q9NYL9 352 aa11.17□□□□□ -0.62
PHF3-208ENST00000506783 PREX1Q8TCU6 1659 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 ATP7BP35670 1465 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 ALDH1L1O75891 902 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 SLC3A2P08195 630 aaKnown RBP11.16□□□□□ -0.62
PHF3-208ENST00000506783 HSPD1P10809 573 aaKnown RBP11.16□□□□□ -0.62
PHF3-208ENST00000506783 ATP1A3P13637 1013 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 CASP1P29466 404 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 NDUFA8P51970 172 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 FAM98CQ17RN3 349 aaKnown RBP11.16□□□□□ -0.62
PHF3-208ENST00000506783 ZSCAN25Q6NSZ9 544 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 DHX32Q7L7V1 743 aaKnown RBP11.16□□□□□ -0.62
PHF3-208ENST00000506783 OSBP2Q969R2 916 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 AIDAQ96BJ3 306 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 GOLPH3LQ9H4A5 285 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 SLC52A2Q9HAB3 445 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 ST7Q9NRC1 585 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 NRDCO43847 1150 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 ZNF75DP51815 510 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 KARSQ15046 597 aaKnown RBP11.16□□□□□ -0.62
PHF3-208ENST00000506783 DPCR1Q3MIW9 517 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 ARHGEF25Q86VW2 580 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 DNAJC10Q8IXB1 793 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 MYRIPQ8NFW9 859 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 SALL3Q9BXA9 1300 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 KIF13AQ9H1H9 1805 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 CYP27B1O15528 508 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 DHX37Q8IY37 1157 aaKnown RBP11.16□□□□□ -0.62
PHF3-208ENST00000506783 PUS7LQ9H0K6 701 aaKnown RBP11.16□□□□□ -0.62
PHF3-208ENST00000506783 LRP2BPQ9P2M1 347 aa11.16□□□□□ -0.62
PHF3-208ENST00000506783 ZNF215Q9UL58 517 aaPredicted RBP11.16□□□□□ -0.62
PHF3-208ENST00000506783 IFIT3O14879 490 aaKnown RBP11.15□□□□□ -0.62
PHF3-208ENST00000506783 MNS1Q8NEH6 495 aa11.15□□□□□ -0.62
PHF3-208ENST00000506783 CHMP4AQ9BY43 222 aa11.15□□□□□ -0.62
PHF3-208ENST00000506783 ASAP1Q9ULH1 1129 aa11.15□□□□□ -0.62
PHF3-208ENST00000506783 VWDEQ8N2E2 1590 aa11.15□□□□□ -0.62
PHF3-208ENST00000506783 ARHGEF10O15013 1369 aa11.15□□□□□ -0.62
PHF3-208ENST00000506783 SIGLEC1Q9BZZ2 1709 aa11.15□□□□□ -0.62
PHF3-208ENST00000506783 M0R2C6 588 aa11.15□□□□□ -0.62
PHF3-208ENST00000506783 FGAP02671 866 aa11.15□□□□□ -0.62
PHF3-208ENST00000506783 DNA2P51530 1060 aa11.15□□□□□ -0.62
PHF3-208ENST00000506783 ZNF396Q96N95 335 aaPredicted RBP11.15□□□□□ -0.62
PHF3-208ENST00000506783 DDX19AQ9NUU7 478 aaKnown RBP11.15□□□□□ -0.62
PHF3-208ENST00000506783 SFPQP23246 707 aaKnown RBP eCLIP11.14□□□□□ -0.63
PHF3-208ENST00000506783 PNOCQ13519 176 aa11.14□□□□□ -0.63
PHF3-208ENST00000506783 XAGE2Q96GT9 111 aa11.14□□□□□ -0.63
PHF3-208ENST00000506783 MPHOSPH8Q99549 860 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms