RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 RIMS2Q9UQ26 1411 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 DYTNA2CJ06 578 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 SPECC1L-ADORA2AF8WAN1 911 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 KRT18P05783 430 aaKnown RBP6.87□□□□□ -1.31
LINC02397-201ENST00000504409 BLVRAP53004 296 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 VWA3BQ502W6 1294 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 KDM2BQ8NHM5 1336 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 PAK2Q13177 524 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 TADA2BQ86TJ2 420 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 TEX11Q8IYF3 940 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 PANK3Q9H999 370 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 MYOM2P54296 1465 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 GLRX3O76003 335 aaKnown RBP6.87□□□□□ -1.31
LINC02397-201ENST00000504409 SKIP12755 728 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 EIF3BP55884 814 aaKnown RBP6.87□□□□□ -1.31
LINC02397-201ENST00000504409 SYCP2LQ5T4T6 812 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 CNKSR2Q8WXI2 1034 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 FAF1Q9UNN5 650 aaPredicted RBP6.87□□□□□ -1.31
LINC02397-201ENST00000504409 NSD3Q9BZ95 1437 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 GLE1Q53GS7 698 aaKnown RBP6.87□□□□□ -1.31
LINC02397-201ENST00000504409 TSG101Q99816 390 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 ATP2A2P16615 1042 aaKnown RBP6.87□□□□□ -1.31
LINC02397-201ENST00000504409 C8orf34Q49A92 452 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 RCSD1Q6JBY9 416 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 SLC4A10Q6U841 1118 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 APBB1IPQ7Z5R6 666 aaPredicted RBP6.87□□□□□ -1.31
LINC02397-201ENST00000504409 ACTN4O43707 911 aaKnown RBP6.87□□□□□ -1.31
LINC02397-201ENST00000504409 CCDC28BQ9BUN5 200 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 ODF2LQ9ULJ1 636 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 BICDL2A1A5D9 508 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 DHX9Q08211 1270 aaKnown RBP6.87□□□□□ -1.31
LINC02397-201ENST00000504409 FAM186BQ8IYM0 893 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 FBXO18Q8NFZ0 1043 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 CCDC26Q8TAB7 109 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 BMP2KQ9NSY1 1161 aaPredicted RBP6.87□□□□□ -1.31
LINC02397-201ENST00000504409 IL1RAPL1Q9NZN1 696 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 GCFC2P16383 781 aaKnown RBP6.87□□□□□ -1.31
LINC02397-201ENST00000504409 BLOC1S2Q6QNY1 142 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.87□□□□□ -1.31
LINC02397-201ENST00000504409 ST20-MTHFSA0A0A6YYL1 179 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 POTEB3A0JP26 581 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 GOLGA6BA6NDN3 693 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 FIBPO43427 364 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 POTEBQ6S5H4 581 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 MCF2L2Q86YR7 1114 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 TXLNGQ9NUQ3 528 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 KIF5AQ12840 1032 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 ZNF189O75820 626 aaPredicted RBP6.86□□□□□ -1.31
LINC02397-201ENST00000504409 TSC22D1Q15714 1073 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 BICDL1Q6ZP65 573 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 STAMBPL1Q96FJ0 436 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 FAM129AQ9BZQ8 928 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 DNAJC25Q9H1X3 360 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 FGFR1OP2Q9NVK5 253 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 AK9Q5TCS8 1911 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 HOXC8P31273 242 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 G3BP1Q13283 466 aaKnown RBP eCLIP6.86□□□□□ -1.31
LINC02397-201ENST00000504409 SCOCQ9UIL1 159 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 COL17A1Q9UMD9 1497 aaPredicted RBP6.86□□□□□ -1.31
LINC02397-201ENST00000504409 DIAPH1O60610 1272 aaKnown RBP6.86□□□□□ -1.31
LINC02397-201ENST00000504409 GUCY2CP25092 1073 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 MIER3Q7Z3K6 550 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 TMTC1Q8IUR5 882 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 LIN7AO14910 233 aaPredicted RBP6.86□□□□□ -1.31
LINC02397-201ENST00000504409 TRIML1Q8N9V2 468 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 UNC13AQ9UPW8 1703 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 NAA16Q6N069 864 aaPredicted RBP6.86□□□□□ -1.31
LINC02397-201ENST00000504409 CPLX4Q7Z7G2 160 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 CCDC144CPQ8IYA2 1237 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 PARVBQ9HBI1 364 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 NUTM2DQ5VT03 806 aaPredicted RBP6.86□□□□□ -1.31
LINC02397-201ENST00000504409 NUTM2AQ8IVF1 878 aaPredicted RBP6.86□□□□□ -1.31
LINC02397-201ENST00000504409 TMEM87AQ8NBN3 555 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 CCDC12Q8WUD4 166 aaPredicted RBP6.86□□□□□ -1.31
LINC02397-201ENST00000504409 USP6NLQ92738 828 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 SPDL1Q96EA4 605 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 CSRNP2Q9H175 543 aa6.86□□□□□ -1.31
LINC02397-201ENST00000504409 PPP2R5BQ15173 497 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 USP37Q86T82 979 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 FAM96AQ9H5X1 160 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 PDRG1Q9NUG6 133 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 CCDC97Q96F63 343 aaPredicted RBP6.85□□□□□ -1.31
LINC02397-201ENST00000504409 GNL3LQ9NVN8 582 aaKnown RBP6.85□□□□□ -1.31
LINC02397-201ENST00000504409 VPS18Q9P253 973 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 PCK1P35558 622 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 ST5P78524 1137 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 PPP2R3AQ06190 1150 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.85□□□□□ -1.31
LINC02397-201ENST00000504409 LCMT1Q9UIC8 334 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 A0A1B0GW55 424 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 ARHGAP10A1A4S6 786 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 DUX4L2P0CJ85 424 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 DUX4L3P0CJ86 424 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 DUX4L4P0CJ87 422 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 DUX4L5P0CJ88 424 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 DUX4L6P0CJ89 424 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 DUX4L7P0CJ90 424 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 MKRN3Q13064 507 aaKnown RBP6.85□□□□□ -1.31
LINC02397-201ENST00000504409 CAMK4Q16566 473 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 RAB11FIP4Q86YS3 637 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms