RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 MRPS35P82673 323 aaKnown RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 CCDC158Q5M9N0 1113 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 FILIP1Q7Z7B0 1213 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 DZIP3Q86Y13 1208 aaKnown RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 SYCP3Q8IZU3 236 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 JAKMIP2Q96AA8 810 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 MMADHCQ9H3L0 296 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 CLIP2Q9UDT6 1046 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 HOOK1Q9UJC3 728 aaKnown RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 CARD8Q9Y2G2 431 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 ENO4A6NNW6 628 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 KRT18P05783 430 aaKnown RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 HNRNPCP07910 306 aaKnown RBP eCLIP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 TAOK1Q7L7X3 1001 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 GOLGA5Q8TBA6 731 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 SPDL1Q96EA4 605 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 KIF9Q9HAQ2 790 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 LUC7L2Q9Y383 392 aaKnown RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 DIAPH2O60879 1101 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 TXLNAP40222 546 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 PDE1CQ14123 709 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 TERF2Q15554 542 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 PTPROQ16827 1216 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 CCDC144BQ3MJ40 725 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 LARP1BQ659C4 914 aaKnown RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 SMC5Q8IY18 1101 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 TMEM57Q8N5G2 664 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 FSD1Q9BTV5 496 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 BECN2A8MW95 431 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 FMNL1O95466 1100 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 MCM4P33991 863 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 EIF5P55010 431 aaKnown RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 EIF4G2P78344 907 aaKnown RBP eCLIP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 CEBPZQ03701 1054 aaKnown RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 ITGB3BPQ13352 177 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 NAALADL2Q58DX5 795 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 CCDC178Q5BJE1 867 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 CAPRIN2Q6IMN6 1127 aaKnown RBP7.09□□□□□ -1.27
CLCN3-204ENST00000504131 BICD2Q8TD16 824 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 GTF3C6Q969F1 213 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 PPP1R12CQ9BZL4 782 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 ZKSCAN5Q9Y2L8 839 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 ANGPTL3Q9Y5C1 460 aa7.09□□□□□ -1.27
CLCN3-204ENST00000504131 BUB1BO60566 1050 aaPredicted RBP7.09□□□□□ -1.28
CLCN3-204ENST00000504131 CETN1Q12798 172 aa7.09□□□□□ -1.28
CLCN3-204ENST00000504131 TAF7Q15545 349 aaPredicted RBP7.09□□□□□ -1.28
CLCN3-204ENST00000504131 ATP2B3Q16720 1220 aa7.09□□□□□ -1.28
CLCN3-204ENST00000504131 MUM1Q2TAK8 710 aa7.09□□□□□ -1.28
CLCN3-204ENST00000504131 HS1BP3Q53T59 392 aa7.09□□□□□ -1.28
CLCN3-204ENST00000504131 DCLK2Q8N568 766 aa7.09□□□□□ -1.28
CLCN3-204ENST00000504131 EFHD2Q96C19 240 aaPredicted RBP7.09□□□□□ -1.28
CLCN3-204ENST00000504131 MAGED1Q9Y5V3 778 aaPredicted RBP7.09□□□□□ -1.28
CLCN3-204ENST00000504131 DHX57Q6P158 1386 aaKnown RBP7.08□□□□□ -1.28
CLCN3-204ENST00000504131 TCF3P15923 654 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 EIF2B5Q13144 721 aaKnown RBP7.08□□□□□ -1.28
CLCN3-204ENST00000504131 CUL4BQ13620 913 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 KLHDC4Q8TBB5 520 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 AGBL1Q96MI9 1066 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 SLC4A7Q9Y6M7 1214 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 ANKRD1Q15327 319 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 CEP78Q5JTW2 689 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 TCERG1LQ5VWI1 586 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 SAMD14Q8IZD0 417 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-204ENST00000504131 IFT122Q9HBG6 1241 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 INTUQ9ULD6 942 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 USH1CQ9Y6N9 552 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 CCDC194A0A1B0GVG4 234 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 H0Y3Z8 333 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 EBAG9O00559 213 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 PARNO95453 639 aaKnown RBP7.08□□□□□ -1.28
CLCN3-204ENST00000504131 KRT14P02533 472 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 CNGA1P29973 690 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 HDLBPQ00341 1268 aaKnown RBP7.08□□□□□ -1.28
CLCN3-204ENST00000504131 ADCY1Q08828 1119 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 DPH6Q7L8W6 267 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 SLF2Q8IX21 1173 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 CCDC148Q8NFR7 591 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 SMARCC2Q8TAQ2 1214 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 CD248Q9HCU0 757 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 FHAD1B1AJZ9 1412 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 PTPRGP23470 1445 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 TARBP1Q13395 1621 aaKnown RBP7.08□□□□□ -1.28
CLCN3-204ENST00000504131 KANK1Q14678 1352 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 P4HA2O15460 535 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 SYNJ1O43426 1573 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 PRC1O43663 620 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 TUFMP49411 452 aaKnown RBP7.08□□□□□ -1.28
CLCN3-204ENST00000504131 LETM2Q2VYF4 491 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 SAPCD2Q86UD0 394 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 PNISRQ8TF01 805 aaKnown RBP7.08□□□□□ -1.28
CLCN3-204ENST00000504131 CFAP57Q96MR6 1250 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 TTC1Q99614 292 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 INO80BQ9C086 356 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-204ENST00000504131 YIPF3Q9GZM5 350 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 KLF15Q9UIH9 416 aa7.08□□□□□ -1.28
CLCN3-204ENST00000504131 COBLL1Q53SF7 1204 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 SLC30A9Q6PML9 568 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 EHBP1Q8NDI1 1231 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 ABCA5Q8WWZ7 1642 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms