RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 PLPP7Q8NBV4 271 aa7.13□□□□□ -1.27
PTPN20-212ENST00000502254 FRAT1Q92837 279 aaPredicted RBP7.13□□□□□ -1.27
PTPN20-212ENST00000502254 C1QTNF2Q9BXJ5 285 aa7.13□□□□□ -1.27
PTPN20-212ENST00000502254 SMC4Q9NTJ3 1288 aa7.13□□□□□ -1.27
PTPN20-212ENST00000502254 ZMIZ1Q9ULJ6 1067 aa7.13□□□□□ -1.27
PTPN20-212ENST00000502254 DLG5Q8TDM6 1919 aa7.13□□□□□ -1.27
PTPN20-212ENST00000502254 PKD1L3Q7Z443 1732 aa7.13□□□□□ -1.27
PTPN20-212ENST00000502254 ITGBL1O95965 494 aaPredicted RBP7.12□□□□□ -1.27
PTPN20-212ENST00000502254 EIF2S2P20042 333 aaKnown RBP7.12□□□□□ -1.27
PTPN20-212ENST00000502254 CANXP27824 592 aaKnown RBP7.12□□□□□ -1.27
PTPN20-212ENST00000502254 RXRBP28702 533 aa7.12□□□□□ -1.27
PTPN20-212ENST00000502254 RRP1P56182 461 aaKnown RBP7.12□□□□□ -1.27
PTPN20-212ENST00000502254 NCOA4Q13772 614 aa7.12□□□□□ -1.27
PTPN20-212ENST00000502254 TSGA10IPQ3SY00 556 aa7.12□□□□□ -1.27
PTPN20-212ENST00000502254 ERFEQ4G0M1 354 aa7.12□□□□□ -1.27
PTPN20-212ENST00000502254 ZNF790Q6PG37 636 aa7.12□□□□□ -1.27
PTPN20-212ENST00000502254 DZIP3Q86Y13 1208 aaKnown RBP7.12□□□□□ -1.27
PTPN20-212ENST00000502254 DEPDC4Q8N2C3 294 aa7.12□□□□□ -1.27
PTPN20-212ENST00000502254 SSH1Q8WYL5 1049 aa7.12□□□□□ -1.27
PTPN20-212ENST00000502254 PIGBQ92521 554 aa7.12□□□□□ -1.27
PTPN20-212ENST00000502254 FOXJ1Q92949 421 aa7.12□□□□□ -1.27
PTPN20-212ENST00000502254 MKRN1Q9UHC7 482 aaKnown RBP7.12□□□□□ -1.27
PTPN20-212ENST00000502254 PTCD1O75127 700 aaKnown RBP7.11□□□□□ -1.27
PTPN20-212ENST00000502254 PTK7Q13308 1070 aa7.11□□□□□ -1.27
PTPN20-212ENST00000502254 POTEAQ6S8J7 498 aa7.11□□□□□ -1.27
PTPN20-212ENST00000502254 TRMT44Q8IYL2 757 aaKnown RBP7.11□□□□□ -1.27
PTPN20-212ENST00000502254 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.11□□□□□ -1.27
PTPN20-212ENST00000502254 CCDC85AQ96PX6 553 aaPredicted RBP7.11□□□□□ -1.27
PTPN20-212ENST00000502254 ASAP1Q9ULH1 1129 aa7.11□□□□□ -1.27
PTPN20-212ENST00000502254 GLI3P10071 1580 aa7.11□□□□□ -1.27
PTPN20-212ENST00000502254 LRRC37A3O60309 1634 aa7.1□□□□□ -1.27
PTPN20-212ENST00000502254 PRAMEF22A3QJZ6 481 aa7.1□□□□□ -1.27
PTPN20-212ENST00000502254 ESPNB1AK53 854 aa7.1□□□□□ -1.27
PTPN20-212ENST00000502254 ATP5J2-PTCD1G3V325 749 aa7.1□□□□□ -1.27
PTPN20-212ENST00000502254 KCNQ2O43526 872 aa7.1□□□□□ -1.27
PTPN20-212ENST00000502254 GIGYF1O75420 1035 aaPredicted RBP7.1□□□□□ -1.27
PTPN20-212ENST00000502254 SH3BP2P78314 561 aa7.1□□□□□ -1.27
PTPN20-212ENST00000502254 ALDH1L2Q3SY69 923 aa7.1□□□□□ -1.27
PTPN20-212ENST00000502254 CRTC2Q53ET0 693 aaPredicted RBP7.1□□□□□ -1.27
PTPN20-212ENST00000502254 TMEM164Q5U3C3 297 aa7.1□□□□□ -1.27
PTPN20-212ENST00000502254 CCDC30Q5VVM6 783 aa7.1□□□□□ -1.27
PTPN20-212ENST00000502254 KRT27Q7Z3Y8 459 aa7.1□□□□□ -1.27
PTPN20-212ENST00000502254 ZNF428Q96B54 188 aa7.1□□□□□ -1.27
PTPN20-212ENST00000502254 ZNF496Q96IT1 587 aaPredicted RBP7.1□□□□□ -1.27
PTPN20-212ENST00000502254 FMNL2Q96PY5 1086 aa7.1□□□□□ -1.27
PTPN20-212ENST00000502254 RGS17Q9UGC6 210 aaPredicted RBP7.1□□□□□ -1.27
PTPN20-212ENST00000502254 NOB1Q9ULX3 412 aaKnown RBP7.1□□□□□ -1.27
PTPN20-212ENST00000502254 NOVA2Q9UNW9 492 aaKnown RBP7.1□□□□□ -1.27
PTPN20-212ENST00000502254 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.1□□□□□ -1.27
PTPN20-212ENST00000502254 RNF123Q5XPI4 1314 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 MAGEB6P1A0A0J9YX57 407 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 USP17L15C9J2P7 530 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 USP17L10C9JJH3 530 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 USP17L13C9JLJ4 530 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 USP17L12C9JPN9 530 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 USP17L11C9JVI0 530 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 USP17L21D6R901 530 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 USP17L18D6R9N7 530 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 USP17L22D6RA61 530 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 USP17L17D6RBQ6 530 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 USP17L19D6RCP7 530 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 USP17L20D6RJB6 530 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 SNRPA1P09661 255 aaKnown RBP7.09□□□□□ -1.27
PTPN20-212ENST00000502254 KCNC4Q03721 635 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 USP17L24Q0WX57 530 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 EML3Q32P44 896 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 LINC01559Q495D7 138 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 C20orf194Q5TEA3 1177 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 STK32AQ8WU08 396 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 STK31Q9BXU1 1019 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 ATG3Q9NT62 314 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 HCSTQ9UBK5 93 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 TNNQ9UQP3 1299 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 MRC1P22897 1456 aa7.09□□□□□ -1.27
PTPN20-212ENST00000502254 SHANK3Q9BYB0 1731 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 RNF223E7ERA6 249 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 PPEF1O14829 653 aaPredicted RBP7.08□□□□□ -1.28
PTPN20-212ENST00000502254 IPO8O15397 1037 aaKnown RBP7.08□□□□□ -1.28
PTPN20-212ENST00000502254 DKK1O94907 266 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 HOXB7P09629 217 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 RASA1P20936 1047 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 RNF20Q5VTR2 975 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 ZKSCAN2Q63HK3 967 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 CCDC125Q86Z20 511 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 ANKLE1Q8NAG6 615 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 CHMP4AQ9BY43 222 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 GZF1Q9H116 711 aaPredicted RBP7.08□□□□□ -1.28
PTPN20-212ENST00000502254 USP16Q9Y5T5 823 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 ADAMTS7Q9UKP4 1686 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 BCL9O00512 1426 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 WNK3Q9BYP7 1800 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 HEG1Q9ULI3 1381 aa7.08□□□□□ -1.28
PTPN20-212ENST00000502254 SOS1Q07889 1333 aaPredicted RBP7.07□□□□□ -1.28
PTPN20-212ENST00000502254 KIF16BQ96L93 1317 aa7.07□□□□□ -1.28
PTPN20-212ENST00000502254 THSD7AQ9UPZ6 1657 aa7.07□□□□□ -1.28
PTPN20-212ENST00000502254 ZBTB7BO15156 539 aaPredicted RBP7.07□□□□□ -1.28
PTPN20-212ENST00000502254 ANXA1P04083 346 aa7.07□□□□□ -1.28
PTPN20-212ENST00000502254 PIP4K2AP48426 406 aaPredicted RBP7.07□□□□□ -1.28
PTPN20-212ENST00000502254 CLDN10P78369 228 aa7.07□□□□□ -1.28
PTPN20-212ENST00000502254 AGERQ15109 404 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms