RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 NLRP2Q9NX02 1062 aa7.71□□□□□ -1.18
PTPRK-215ENST00000498284 NFKBIEO00221 500 aa7.7□□□□□ -1.18
PTPRK-215ENST00000498284 PRPF40AO75400 957 aaKnown RBP7.7□□□□□ -1.18
PTPRK-215ENST00000498284 DGKGP49619 791 aa7.7□□□□□ -1.18
PTPRK-215ENST00000498284 FGD1P98174 961 aa7.7□□□□□ -1.18
PTPRK-215ENST00000498284 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.7□□□□□ -1.18
PTPRK-215ENST00000498284 KIAA0319Q5VV43 1072 aa7.7□□□□□ -1.18
PTPRK-215ENST00000498284 HHIPQ96QV1 700 aa7.7□□□□□ -1.18
PTPRK-215ENST00000498284 BCL2L13Q9BXK5 485 aa7.7□□□□□ -1.18
PTPRK-215ENST00000498284 ADAMTS8Q9UP79 889 aa7.7□□□□□ -1.18
PTPRK-215ENST00000498284 PDE2AO00408 941 aaPredicted RBP7.69□□□□□ -1.18
PTPRK-215ENST00000498284 GADD45BO75293 160 aaPredicted RBP7.69□□□□□ -1.18
PTPRK-215ENST00000498284 AFF1P51825 1210 aaKnown RBP7.69□□□□□ -1.18
PTPRK-215ENST00000498284 SNRPNP63162 240 aaKnown RBP7.69□□□□□ -1.18
PTPRK-215ENST00000498284 GRIK5Q16478 980 aa7.69□□□□□ -1.18
PTPRK-215ENST00000498284 PI16Q6UXB8 463 aa7.69□□□□□ -1.18
PTPRK-215ENST00000498284 TMEM102Q8N9M5 508 aaPredicted RBP7.69□□□□□ -1.18
PTPRK-215ENST00000498284 NXPE3Q969Y0 559 aa7.69□□□□□ -1.18
PTPRK-215ENST00000498284 POP1Q99575 1024 aaKnown RBP7.69□□□□□ -1.18
PTPRK-215ENST00000498284 EHD4Q9H223 541 aa7.69□□□□□ -1.18
PTPRK-215ENST00000498284 TRIM33Q9UPN9 1127 aa7.69□□□□□ -1.18
PTPRK-215ENST00000498284 TAGLNQ01995 201 aaKnown RBP7.68□□□□□ -1.18
PTPRK-215ENST00000498284 GDF6Q6KF10 455 aaPredicted RBP7.68□□□□□ -1.18
PTPRK-215ENST00000498284 LINC00114Q6XXX2 140 aa7.68□□□□□ -1.18
PTPRK-215ENST00000498284 GIPC2Q8TF65 315 aa7.68□□□□□ -1.18
PTPRK-215ENST00000498284 DUSP9Q99956 384 aaKnown RBP7.68□□□□□ -1.18
PTPRK-215ENST00000498284 SUV39H2Q9H5I1 410 aa7.68□□□□□ -1.18
PTPRK-215ENST00000498284 LIN7BQ9HAP6 207 aa7.68□□□□□ -1.18
PTPRK-215ENST00000498284 COL9A3Q14050 684 aaPredicted RBP7.67□□□□□ -1.18
PTPRK-215ENST00000498284 CCNJLQ8IV13 435 aa7.67□□□□□ -1.18
PTPRK-215ENST00000498284 TCF12Q99081 682 aa7.67□□□□□ -1.18
PTPRK-215ENST00000498284 BHLHE41Q9C0J9 482 aaPredicted RBP7.67□□□□□ -1.18
PTPRK-215ENST00000498284 LACRTQ9GZZ8 138 aa7.67□□□□□ -1.18
PTPRK-215ENST00000498284 NID1P14543 1247 aa7.66□□□□□ -1.18
PTPRK-215ENST00000498284 PTPRAP18433 802 aa7.66□□□□□ -1.18
PTPRK-215ENST00000498284 GRM2Q14416 872 aa7.66□□□□□ -1.18
PTPRK-215ENST00000498284 ZNF326Q5BKZ1 582 aaKnown RBP7.66□□□□□ -1.18
PTPRK-215ENST00000498284 PODNQ7Z5L7 613 aa7.66□□□□□ -1.18
PTPRK-215ENST00000498284 CACTIN-AS1Q8N1I8 211 aa7.66□□□□□ -1.18
PTPRK-215ENST00000498284 IL22RA1Q8N6P7 574 aa7.66□□□□□ -1.18
PTPRK-215ENST00000498284 FOXD4L4Q8WXT5 416 aaPredicted RBP7.66□□□□□ -1.18
PTPRK-215ENST00000498284 MKL2Q9ULH7 1088 aa7.66□□□□□ -1.18
PTPRK-215ENST00000498284 TRAK1Q9UPV9 953 aa7.66□□□□□ -1.18
PTPRK-215ENST00000498284 SPG7Q9UQ90 795 aa7.66□□□□□ -1.18
PTPRK-215ENST00000498284 METTL12A8MUP2 240 aa7.65□□□□□ -1.18
PTPRK-215ENST00000498284 CDC27P30260 824 aa7.65□□□□□ -1.18
PTPRK-215ENST00000498284 GNA15P30679 374 aa7.65□□□□□ -1.18
PTPRK-215ENST00000498284 BAG6P46379 1132 aa7.65□□□□□ -1.18
PTPRK-215ENST00000498284 MSL1Q68DK7 614 aa7.65□□□□□ -1.18
PTPRK-215ENST00000498284 ADAMTSL4Q6UY14 1074 aa7.65□□□□□ -1.18
PTPRK-215ENST00000498284 WFDC8Q8IUA0 241 aa7.65□□□□□ -1.18
PTPRK-215ENST00000498284 BEND7Q8N7W2 519 aaPredicted RBP7.65□□□□□ -1.18
PTPRK-215ENST00000498284 FRMD6Q96NE9 622 aa7.65□□□□□ -1.18
PTPRK-215ENST00000498284 BCO2Q9BYV7 579 aa7.65□□□□□ -1.18
PTPRK-215ENST00000498284 ADAM19Q9H013 955 aa7.65□□□□□ -1.18
PTPRK-215ENST00000498284 RNF19AQ9NV58 838 aa7.65□□□□□ -1.18
PTPRK-215ENST00000498284 PARP2Q9UGN5 583 aa7.65□□□□□ -1.18
PTPRK-215ENST00000498284 CNTNAP5Q8WYK1 1306 aa7.64□□□□□ -1.19
PTPRK-215ENST00000498284 RBM47A0AV96 593 aaKnown RBP7.64□□□□□ -1.19
PTPRK-215ENST00000498284 FAM177BA6PVY3 158 aa7.64□□□□□ -1.19
PTPRK-215ENST00000498284 PIK3R2O00459 728 aa7.64□□□□□ -1.19
PTPRK-215ENST00000498284 GNB5O14775 395 aa7.64□□□□□ -1.19
PTPRK-215ENST00000498284 GIPC1O14908 333 aa7.64□□□□□ -1.19
PTPRK-215ENST00000498284 ZNF16P17020 682 aaPredicted RBP7.64□□□□□ -1.19
PTPRK-215ENST00000498284 XPCQ01831 940 aaPredicted RBP7.64□□□□□ -1.19
PTPRK-215ENST00000498284 PRPF40BQ6NWY9 871 aaKnown RBP7.64□□□□□ -1.19
PTPRK-215ENST00000498284 NXPE4Q6UWF7 544 aa7.64□□□□□ -1.19
PTPRK-215ENST00000498284 DMRTC2Q8IXT2 367 aaPredicted RBP7.64□□□□□ -1.19
PTPRK-215ENST00000498284 GLIS3Q8NEA6 775 aa7.64□□□□□ -1.19
PTPRK-215ENST00000498284 ASAP3Q8TDY4 903 aa7.64□□□□□ -1.19
PTPRK-215ENST00000498284 BSNDQ8WZ55 320 aa7.64□□□□□ -1.19
PTPRK-215ENST00000498284 TRIM11Q96F44 468 aa7.64□□□□□ -1.19
PTPRK-215ENST00000498284 OSBPL7Q9BZF2 842 aa7.64□□□□□ -1.19
PTPRK-215ENST00000498284 SH2B1Q9NRF2 756 aaPredicted RBP7.64□□□□□ -1.19
PTPRK-215ENST00000498284 PPP4R2Q9NY27 417 aa7.64□□□□□ -1.19
PTPRK-215ENST00000498284 TMEM238LA0A1B0GVL6 79 aa7.63□□□□□ -1.19
PTPRK-215ENST00000498284 GRIA4P48058 902 aa7.63□□□□□ -1.19
PTPRK-215ENST00000498284 RASSF7Q02833 373 aa7.63□□□□□ -1.19
PTPRK-215ENST00000498284 SUZ12Q15022 739 aaKnown RBP7.63□□□□□ -1.19
PTPRK-215ENST00000498284 SPRED3Q2MJR0 410 aa7.63□□□□□ -1.19
PTPRK-215ENST00000498284 ILDR2Q71H61 639 aa7.63□□□□□ -1.19
PTPRK-215ENST00000498284 SCARF2Q96GP6 870 aaPredicted RBP7.63□□□□□ -1.19
PTPRK-215ENST00000498284 PLVAPQ9BX97 442 aa7.63□□□□□ -1.19
PTPRK-215ENST00000498284 ABCB6Q9NP58 842 aa7.63□□□□□ -1.19
PTPRK-215ENST00000498284 A0A096LPE4 126 aa7.62□□□□□ -1.19
PTPRK-215ENST00000498284 A0A1W2PPZ6 126 aa7.62□□□□□ -1.19
PTPRK-215ENST00000498284 DAB2P98082 770 aa7.62□□□□□ -1.19
PTPRK-215ENST00000498284 PSMD2Q13200 908 aa7.62□□□□□ -1.19
PTPRK-215ENST00000498284 TRAPPC3LQ5T215 181 aa7.62□□□□□ -1.19
PTPRK-215ENST00000498284 SRCIN1Q9C0H9 1055 aa7.62□□□□□ -1.19
PTPRK-215ENST00000498284 MUC3BQ9H195 1237 aa7.62□□□□□ -1.19
PTPRK-215ENST00000498284 SOX13Q9UN79 622 aa7.62□□□□□ -1.19
PTPRK-215ENST00000498284 PPME1Q9Y570 386 aa7.62□□□□□ -1.19
PTPRK-215ENST00000498284 EPHA1P21709 976 aa7.61□□□□□ -1.19
PTPRK-215ENST00000498284 CDC25BP30305 580 aa7.61□□□□□ -1.19
PTPRK-215ENST00000498284 FCGRTP55899 365 aa7.61□□□□□ -1.19
PTPRK-215ENST00000498284 TMC4Q7Z404 712 aa7.61□□□□□ -1.19
PTPRK-215ENST00000498284 VN1R5Q7Z5H4 357 aa7.61□□□□□ -1.19
PTPRK-215ENST00000498284 TMEM151AQ8N4L1 468 aa7.61□□□□□ -1.19
PTPRK-215ENST00000498284 FAM161BQ96MY7 647 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms