RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 KLRG2A4D1S0 409 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-210ENST00000498259 ZBTB22O15209 634 aa10.16□□□□□ -0.78
SF3A1-210ENST00000498259 FRAT2O75474 233 aaPredicted RBP10.16□□□□□ -0.78
SF3A1-210ENST00000498259 MMP10P09238 476 aa10.16□□□□□ -0.78
SF3A1-210ENST00000498259 NPR1P16066 1061 aa10.16□□□□□ -0.78
SF3A1-210ENST00000498259 MAP3K12Q12852 859 aa10.16□□□□□ -0.78
SF3A1-210ENST00000498259 WASHC4Q2M389 1173 aa10.16□□□□□ -0.78
SF3A1-210ENST00000498259 SMIM5Q71RC9 77 aa10.16□□□□□ -0.78
SF3A1-210ENST00000498259 SNRKQ9NRH2 765 aa10.16□□□□□ -0.78
SF3A1-210ENST00000498259 DENND2AQ9ULE3 1009 aa10.16□□□□□ -0.78
SF3A1-210ENST00000498259 SPEF2Q9C093 1822 aa10.16□□□□□ -0.78
SF3A1-210ENST00000498259 DDX60Q8IY21 1712 aaKnown RBP10.16□□□□□ -0.78
SF3A1-210ENST00000498259 XDHP47989 1333 aa10.15□□□□□ -0.78
SF3A1-210ENST00000498259 PNPLA7Q6ZV29 1317 aa10.15□□□□□ -0.78
SF3A1-210ENST00000498259 RNF113AO15541 343 aaKnown RBP10.15□□□□□ -0.78
SF3A1-210ENST00000498259 ATP2B4P23634 1241 aa10.15□□□□□ -0.78
SF3A1-210ENST00000498259 KRT32Q14532 448 aa10.15□□□□□ -0.78
SF3A1-210ENST00000498259 GRIPAP1Q4V328 841 aa10.15□□□□□ -0.78
SF3A1-210ENST00000498259 ZGPATQ8N5A5 531 aaKnown RBP10.15□□□□□ -0.78
SF3A1-210ENST00000498259 SPATA5Q8NB90 893 aa10.15□□□□□ -0.78
SF3A1-210ENST00000498259 CELF1Q92879 486 aaKnown RBP10.15□□□□□ -0.78
SF3A1-210ENST00000498259 SNX21Q969T3 373 aa10.15□□□□□ -0.78
SF3A1-210ENST00000498259 HMG20BQ9P0W2 317 aa10.15□□□□□ -0.78
SF3A1-210ENST00000498259 CTNNA3Q9UI47 895 aa10.15□□□□□ -0.78
SF3A1-210ENST00000498259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.15□□□□□ -0.78
SF3A1-210ENST00000498259 LRP5O75197 1615 aa10.15□□□□□ -0.79
SF3A1-210ENST00000498259 ZNF804BA4D1E1 1349 aa10.14□□□□□ -0.79
SF3A1-210ENST00000498259 PDS5AQ29RF7 1337 aaKnown RBP10.14□□□□□ -0.79
SF3A1-210ENST00000498259 TNS1Q9HBL0 1735 aaKnown RBP10.14□□□□□ -0.79
SF3A1-210ENST00000498259 H0YIN7 160 aa10.14□□□□□ -0.79
SF3A1-210ENST00000498259 TAF5LO75529 589 aa10.14□□□□□ -0.79
SF3A1-210ENST00000498259 PSMA5P28066 241 aa10.14□□□□□ -0.79
SF3A1-210ENST00000498259 ADORA1P30542 326 aa10.14□□□□□ -0.79
SF3A1-210ENST00000498259 DDR1Q08345 913 aa10.14□□□□□ -0.79
SF3A1-210ENST00000498259 SPTY2D1Q68D10 685 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-210ENST00000498259 HELBQ8NG08 1087 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-210ENST00000498259 MASTLQ96GX5 879 aa10.14□□□□□ -0.79
SF3A1-210ENST00000498259 U3KPZ7 1027 aaPredicted RBP10.14□□□□□ -0.79
SF3A1-210ENST00000498259 HSP90AA1P07900 732 aaKnown RBP10.13□□□□□ -0.79
SF3A1-210ENST00000498259 HIBADHP31937 336 aaKnown RBP10.13□□□□□ -0.79
SF3A1-210ENST00000498259 HSPA4P34932 840 aa10.13□□□□□ -0.79
SF3A1-210ENST00000498259 NMIQ13287 307 aaPredicted RBP10.13□□□□□ -0.79
SF3A1-210ENST00000498259 UBE3CQ15386 1083 aa10.13□□□□□ -0.79
SF3A1-210ENST00000498259 CC2D2BQ6DHV5 1058 aa10.13□□□□□ -0.79
SF3A1-210ENST00000498259 C3orf67Q6ZVT6 689 aa10.13□□□□□ -0.79
SF3A1-210ENST00000498259 ZNF804AQ7Z570 1209 aa10.13□□□□□ -0.79
SF3A1-210ENST00000498259 SP8Q8IXZ3 490 aa10.13□□□□□ -0.79
SF3A1-210ENST00000498259 APPBP2Q92624 585 aa10.13□□□□□ -0.79
SF3A1-210ENST00000498259 CNKSR1Q969H4 720 aa10.13□□□□□ -0.79
SF3A1-210ENST00000498259 GGA1Q9UJY5 639 aa10.13□□□□□ -0.79
SF3A1-210ENST00000498259 CCDC171Q6TFL3 1326 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 AK9Q5TCS8 1911 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 HMGB1P09429 215 aaKnown RBP10.12□□□□□ -0.79
SF3A1-210ENST00000498259 GNAT2P19087 354 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 MCAMP43121 646 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 ZAP70P43403 619 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 PHKA1P46020 1223 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 ZMYM1Q5SVZ6 1142 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 SLC9C2Q5TAH2 1124 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 STYK1Q6J9G0 422 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 C15orf52Q6ZUT6 534 aaKnown RBP10.12□□□□□ -0.79
SF3A1-210ENST00000498259 CERS3Q8IU89 383 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 MAP4K1Q92918 833 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 IL17RAQ96F46 866 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 DSCC1Q9BVC3 393 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 PODXL2Q9NZ53 605 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 LRP2BPQ9P2M1 347 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 EP400Q96L91 3159 aa10.12□□□□□ -0.79
SF3A1-210ENST00000498259 PPEF1O14829 653 aaPredicted RBP10.11□□□□□ -0.79
SF3A1-210ENST00000498259 IDH1O75874 414 aaKnown RBP10.11□□□□□ -0.79
SF3A1-210ENST00000498259 SRGNP10124 158 aa10.11□□□□□ -0.79
SF3A1-210ENST00000498259 POLD1P28340 1107 aa10.11□□□□□ -0.79
SF3A1-210ENST00000498259 BCAMP50895 628 aa10.11□□□□□ -0.79
SF3A1-210ENST00000498259 FBXO33Q7Z6M2 555 aa10.11□□□□□ -0.79
SF3A1-210ENST00000498259 CCDC24Q8N4L8 307 aa10.11□□□□□ -0.79
SF3A1-210ENST00000498259 WDR66Q8TBY9 1149 aa10.11□□□□□ -0.79
SF3A1-210ENST00000498259 CHMP4CQ96CF2 233 aa10.11□□□□□ -0.79
SF3A1-210ENST00000498259 FAM227BQ96M60 508 aa10.11□□□□□ -0.79
SF3A1-210ENST00000498259 EYA3Q99504 573 aa10.11□□□□□ -0.79
SF3A1-210ENST00000498259 TM6SF1Q9BZW5 370 aa10.11□□□□□ -0.79
SF3A1-210ENST00000498259 LSG1Q9H089 658 aaKnown RBP10.11□□□□□ -0.79
SF3A1-210ENST00000498259 NSFL1CQ9UNZ2 370 aaKnown RBP10.11□□□□□ -0.79
SF3A1-210ENST00000498259 ATP6V0A2Q9Y487 856 aa10.11□□□□□ -0.79
SF3A1-210ENST00000498259 G3V3G9 751 aa10.1□□□□□ -0.79
SF3A1-210ENST00000498259 CYP2E1P05181 493 aaPredicted RBP10.1□□□□□ -0.79
SF3A1-210ENST00000498259 RASGRF1Q13972 1273 aa10.1□□□□□ -0.79
SF3A1-210ENST00000498259 ANKRD1Q15327 319 aa10.1□□□□□ -0.79
SF3A1-210ENST00000498259 DCAF8Q5TAQ9 597 aa10.1□□□□□ -0.79
SF3A1-210ENST00000498259 C2CD5Q86YS7 1000 aa10.1□□□□□ -0.79
SF3A1-210ENST00000498259 SLF2Q8IX21 1173 aa10.1□□□□□ -0.79
SF3A1-210ENST00000498259 AIDAQ96BJ3 306 aa10.1□□□□□ -0.79
SF3A1-210ENST00000498259 NACAP1Q9BZK3 213 aa10.1□□□□□ -0.79
SF3A1-210ENST00000498259 MED23Q9ULK4 1368 aa10.1□□□□□ -0.79
SF3A1-210ENST00000498259 TUBGCP6Q96RT7 1819 aa10.1□□□□□ -0.79
SF3A1-210ENST00000498259 A0A0D9SFI3 127 aa10.09□□□□□ -0.79
SF3A1-210ENST00000498259 C6orf229H3BNL8 230 aa10.09□□□□□ -0.79
SF3A1-210ENST00000498259 K7ELQ4 463 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-210ENST00000498259 UFL1O94874 794 aa10.09□□□□□ -0.79
SF3A1-210ENST00000498259 ADD2P35612 726 aa10.09□□□□□ -0.79
SF3A1-210ENST00000498259 NEK4P51957 841 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms