RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 A0A1B0GUL7 405 aa16.7■□□□□ 0.26
CPNE1-227ENST00000498056 KLRK1P26718 216 aa16.7■□□□□ 0.26
CPNE1-227ENST00000498056 TBC1D16Q8TBP0 767 aa16.7■□□□□ 0.26
CPNE1-227ENST00000498056 LNPKQ9C0E8 428 aa16.7■□□□□ 0.26
CPNE1-227ENST00000498056 TAOK3Q9H2K8 898 aa16.7■□□□□ 0.26
CPNE1-227ENST00000498056 AKAP2Q9Y2D5 859 aa16.7■□□□□ 0.26
CPNE1-227ENST00000498056 DOCK2Q92608 1830 aa16.7■□□□□ 0.26
CPNE1-227ENST00000498056 COL4A5P29400 1685 aa16.69■□□□□ 0.26
CPNE1-227ENST00000498056 NFKBIEO00221 500 aa16.69■□□□□ 0.26
CPNE1-227ENST00000498056 IFIT1P09914 478 aaKnown RBP16.69■□□□□ 0.26
CPNE1-227ENST00000498056 FKBP4Q02790 459 aaKnown RBP eCLIP16.69■□□□□ 0.26
CPNE1-227ENST00000498056 GRIPAP1Q4V328 841 aa16.69■□□□□ 0.26
CPNE1-227ENST00000498056 SUPT20HQ8NEM7 779 aa16.69■□□□□ 0.26
CPNE1-227ENST00000498056 NEUROD6Q96NK8 337 aa16.69■□□□□ 0.26
CPNE1-227ENST00000498056 POLLQ9UGP5 575 aa16.69■□□□□ 0.26
CPNE1-227ENST00000498056 LEMD3Q9Y2U8 911 aa16.69■□□□□ 0.26
CPNE1-227ENST00000498056 WTIPA6NIX2 430 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-227ENST00000498056 IFIT2P09913 472 aaKnown RBP16.68■□□□□ 0.26
CPNE1-227ENST00000498056 FGFR2P21802 821 aa16.68■□□□□ 0.26
CPNE1-227ENST00000498056 ADORA1P30542 326 aa16.68■□□□□ 0.26
CPNE1-227ENST00000498056 UBE4AQ14139 1066 aa16.68■□□□□ 0.26
CPNE1-227ENST00000498056 LPIN2Q92539 896 aa16.68■□□□□ 0.26
CPNE1-227ENST00000498056 EYA3Q99504 573 aa16.68■□□□□ 0.26
CPNE1-227ENST00000498056 GPR108Q9NPR9 543 aa16.68■□□□□ 0.26
CPNE1-227ENST00000498056 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
CPNE1-227ENST00000498056 RIMBP2O15034 1052 aa16.67■□□□□ 0.26
CPNE1-227ENST00000498056 PPIP5K2O43314 1243 aa16.67■□□□□ 0.26
CPNE1-227ENST00000498056 NUCB1Q02818 461 aa16.67■□□□□ 0.26
CPNE1-227ENST00000498056 AOC3Q16853 763 aa16.67■□□□□ 0.26
CPNE1-227ENST00000498056 ARHGAP27Q6ZUM4 889 aa16.67■□□□□ 0.26
CPNE1-227ENST00000498056 CHD1LQ86WJ1 897 aa16.67■□□□□ 0.26
CPNE1-227ENST00000498056 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-227ENST00000498056 PSMD1Q99460 953 aa16.67■□□□□ 0.26
CPNE1-227ENST00000498056 CCDC8Q9H0W5 538 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-227ENST00000498056 ZNF277Q9NRM2 450 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-227ENST00000498056 TIMM10P62072 90 aa16.66■□□□□ 0.26
CPNE1-227ENST00000498056 GORABQ5T7V8 394 aa16.66■□□□□ 0.26
CPNE1-227ENST00000498056 DBNDD2Q9BQY9 259 aa16.66■□□□□ 0.26
CPNE1-227ENST00000498056 RTFDC1Q9BY42 306 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-227ENST00000498056 DBNLQ9UJU6 430 aaKnown RBP16.66■□□□□ 0.26
CPNE1-227ENST00000498056 LTBP3Q9NS15 1303 aa16.66■□□□□ 0.26
CPNE1-227ENST00000498056 GYG1P46976 350 aa16.65■□□□□ 0.26
CPNE1-227ENST00000498056 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
CPNE1-227ENST00000498056 VPS37DQ86XT2 251 aa16.65■□□□□ 0.26
CPNE1-227ENST00000498056 XAGE2Q96GT9 111 aa16.65■□□□□ 0.26
CPNE1-227ENST00000498056 G3V3G9 751 aa16.64■□□□□ 0.25
CPNE1-227ENST00000498056 IARSP41252 1262 aaKnown RBP16.64■□□□□ 0.25
CPNE1-227ENST00000498056 CAVIN4Q5BKX8 364 aa16.64■□□□□ 0.25
CPNE1-227ENST00000498056 DCAF8Q5TAQ9 597 aa16.64■□□□□ 0.25
CPNE1-227ENST00000498056 ZNF804AQ7Z570 1209 aa16.64■□□□□ 0.25
CPNE1-227ENST00000498056 TXNRD3Q86VQ6 643 aa16.64■□□□□ 0.25
CPNE1-227ENST00000498056 OTUD7AQ8TE49 926 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-227ENST00000498056 GPATCH3Q96I76 525 aa16.64■□□□□ 0.25
CPNE1-227ENST00000498056 ZC3H12CQ9C0D7 883 aaKnown RBP16.64■□□□□ 0.25
CPNE1-227ENST00000498056 COL1A1P02452 1464 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-227ENST00000498056 IRS2Q9Y4H2 1338 aa16.64■□□□□ 0.25
CPNE1-227ENST00000498056 ADAMTSL1Q8N6G6 1762 aa16.64■□□□□ 0.25
CPNE1-227ENST00000498056 KIAA2012Q0VF49 1180 aa16.63■□□□□ 0.25
CPNE1-227ENST00000498056 TTC39AQ5SRH9 613 aa16.63■□□□□ 0.25
CPNE1-227ENST00000498056 LARGE2Q8N3Y3 721 aa16.63■□□□□ 0.25
CPNE1-227ENST00000498056 DBNDD1Q9H9R9 158 aa16.63■□□□□ 0.25
CPNE1-227ENST00000498056 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
CPNE1-227ENST00000498056 GRIN3BO60391 1043 aa16.62■□□□□ 0.25
CPNE1-227ENST00000498056 MX1P20591 662 aa16.62■□□□□ 0.25
CPNE1-227ENST00000498056 PHKA1P46020 1223 aa16.62■□□□□ 0.25
CPNE1-227ENST00000498056 TSHZ3Q63HK5 1081 aa16.62■□□□□ 0.25
CPNE1-227ENST00000498056 CCDC102BQ68D86 513 aa16.62■□□□□ 0.25
CPNE1-227ENST00000498056 C16orf71Q8IYS4 520 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-227ENST00000498056 IQSEC3Q9UPP2 1182 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-227ENST00000498056 MYH2Q9UKX2 1941 aa16.61■□□□□ 0.25
CPNE1-227ENST00000498056 ECE2O60344 883 aa16.61■□□□□ 0.25
CPNE1-227ENST00000498056 HIBADHP31937 336 aaKnown RBP16.61■□□□□ 0.25
CPNE1-227ENST00000498056 BCAMP50895 628 aa16.61■□□□□ 0.25
CPNE1-227ENST00000498056 DOK7Q18PE1 504 aa16.61■□□□□ 0.25
CPNE1-227ENST00000498056 CCDC158Q5M9N0 1113 aa16.61■□□□□ 0.25
CPNE1-227ENST00000498056 C15orf52Q6ZUT6 534 aaKnown RBP16.61■□□□□ 0.25
CPNE1-227ENST00000498056 SKAP1Q86WV1 359 aa16.61■□□□□ 0.25
CPNE1-227ENST00000498056 NIM1KQ8IY84 436 aa16.61■□□□□ 0.25
CPNE1-227ENST00000498056 FBXW7Q969H0 707 aa16.61■□□□□ 0.25
CPNE1-227ENST00000498056 FRAT2O75474 233 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-227ENST00000498056 PDE4AP27815 886 aa16.6■□□□□ 0.25
CPNE1-227ENST00000498056 FAM84BQ96KN1 310 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-227ENST00000498056 COA1Q9GZY4 146 aa16.6■□□□□ 0.25
CPNE1-227ENST00000498056 LMNB1P20700 586 aa16.59■□□□□ 0.25
CPNE1-227ENST00000498056 RGS3P49796 1198 aa16.59■□□□□ 0.25
CPNE1-227ENST00000498056 PRELPP51888 382 aa16.59■□□□□ 0.25
CPNE1-227ENST00000498056 ECHDC1Q9NTX5 307 aa16.59■□□□□ 0.25
CPNE1-227ENST00000498056 GNL3LQ9NVN8 582 aaKnown RBP16.59■□□□□ 0.25
CPNE1-227ENST00000498056 RNF181Q9P0P0 153 aa16.59■□□□□ 0.25
CPNE1-227ENST00000498056 SALL3Q9BXA9 1300 aa16.59■□□□□ 0.25
CPNE1-227ENST00000498056 UTRNP46939 3433 aa16.59■□□□□ 0.25
CPNE1-227ENST00000498056 ECM29Q5VYK3 1845 aa16.59■□□□□ 0.25
CPNE1-227ENST00000498056 UQCRFS1P1P0C7P4 283 aa16.58■□□□□ 0.24
CPNE1-227ENST00000498056 ARID4AP29374 1257 aaPredicted RBP16.58■□□□□ 0.24
CPNE1-227ENST00000498056 CHAF1AQ13111 956 aaPredicted RBP16.58■□□□□ 0.24
CPNE1-227ENST00000498056 JDP2Q8WYK2 163 aa16.58■□□□□ 0.24
CPNE1-227ENST00000498056 VPS33BQ9H267 617 aa16.58■□□□□ 0.24
CPNE1-227ENST00000498056 CD209Q9NNX6 404 aa16.58■□□□□ 0.24
CPNE1-227ENST00000498056 JAG2Q9Y219 1238 aa16.58■□□□□ 0.24
CPNE1-227ENST00000498056 TTC41PQ6P2S7 1318 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms