RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, human

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP200-208	ENST00000497539		A0A1B0GUL6	1792 aa		13.77	□□□□□ -0.2
SNRNP200-208	ENST00000497539	MPND	Q8N594	471 aa		13.77	□□□□□ -0.21
SNRNP200-208	ENST00000497539	HELLS	Q9NRZ9	838 aa		13.77	□□□□□ -0.21
SNRNP200-208	ENST00000497539	TMEM63C	Q9P1W3	806 aa		13.77	□□□□□ -0.21
SNRNP200-208	ENST00000497539	CEP126	Q9P2H0	1117 aa		13.77	□□□□□ -0.21
SNRNP200-208	ENST00000497539	RIPOR2	Q9Y4F9	1068 aa		13.77	□□□□□ -0.21
SNRNP200-208	ENST00000497539	RBM8A	Q9Y5S9	174 aa	Known RBP	13.77	□□□□□ -0.21
SNRNP200-208	ENST00000497539	SBF2	Q86WG5	1849 aa		13.77	□□□□□ -0.21
SNRNP200-208	ENST00000497539		A0A1B0GUL7	405 aa		13.77	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ATP6V1A	P38606	617 aa		13.77	□□□□□ -0.21
SNRNP200-208	ENST00000497539	IRS4	O14654	1257 aa	Predicted RBP	13.76	□□□□□ -0.21
SNRNP200-208	ENST00000497539	TAF5L	O75529	589 aa		13.76	□□□□□ -0.21
SNRNP200-208	ENST00000497539	CREB3L3	Q68CJ9	461 aa		13.76	□□□□□ -0.21
SNRNP200-208	ENST00000497539	VGLL2	Q8N8G2	317 aa		13.76	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ZNF594	Q96JF6	807 aa	Predicted RBP	13.76	□□□□□ -0.21
SNRNP200-208	ENST00000497539	PUS3	Q9BZE2	481 aa	Known RBP	13.76	□□□□□ -0.21
SNRNP200-208	ENST00000497539	TAF1L	Q8IZX4	1826 aa		13.76	□□□□□ -0.21
SNRNP200-208	ENST00000497539	AKAP11	Q9UKA4	1901 aa		13.76	□□□□□ -0.21
SNRNP200-208	ENST00000497539	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.76	□□□□□ -0.21
SNRNP200-208	ENST00000497539	PAG1	Q9NWQ8	432 aa		13.76	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ANKRD18B	A2A2Z9	1011 aa		13.75	□□□□□ -0.21
SNRNP200-208	ENST00000497539	SLC27A2	O14975	620 aa		13.75	□□□□□ -0.21
SNRNP200-208	ENST00000497539	RNF20	Q5VTR2	975 aa		13.75	□□□□□ -0.21
SNRNP200-208	ENST00000497539	DOCK2	Q92608	1830 aa		13.75	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ZKSCAN1	P17029	563 aa	Predicted RBP	13.75	□□□□□ -0.21
SNRNP200-208	ENST00000497539	PSMA5	P28066	241 aa		13.75	□□□□□ -0.21
SNRNP200-208	ENST00000497539	MCMDC2	Q4G0Z9	681 aa		13.75	□□□□□ -0.21
SNRNP200-208	ENST00000497539	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.75	□□□□□ -0.21
SNRNP200-208	ENST00000497539	CLEC4G	Q6UXB4	293 aa		13.75	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.75	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ATRN	O75882	1429 aa		13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ZMYM1	Q5SVZ6	1142 aa		13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539	TRMT112	Q9UI30	125 aa	Known RBP	13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539	NOL7	Q9UMY1	257 aa	Known RBP	13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539		U3KPZ7	1027 aa	Predicted RBP	13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ITGA6	P23229	1130 aa		13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539	RC3H1	Q5TC82	1133 aa	Known RBP	13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539	PRPF40B	Q6NWY9	871 aa	Known RBP	13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539	RUFY3	Q7L099	469 aa		13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ACSBG1	Q96GR2	724 aa		13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539	UPF3B	Q9BZI7	483 aa	Known RBP	13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539	GREM2	Q9H772	168 aa		13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539	LIMCH1	Q9UPQ0	1083 aa		13.74	□□□□□ -0.21
SNRNP200-208	ENST00000497539	GPT	P24298	496 aa		13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	KRT32	Q14532	448 aa		13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	CYP46A1	Q9Y6A2	500 aa		13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	MROH5	Q6ZUA9	1318 aa		13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	BRD1	O95696	1058 aa		13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	AK2	P54819	239 aa		13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	TIMM10	P62072	90 aa		13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	NGLY1	Q96IV0	654 aa		13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	PDLIM2	Q96JY6	352 aa		13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	DSCC1	Q9BVC3	393 aa		13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	UTP14A	Q9BVJ6	771 aa	Known RBP	13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	TBC1D2B	Q9UPU7	963 aa		13.73	□□□□□ -0.21
SNRNP200-208	ENST00000497539	NTSR2	O95665	410 aa		13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	IFIT1	P09914	478 aa	Known RBP	13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	FAM98C	Q17RN3	349 aa	Known RBP	13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	CCDC158	Q5M9N0	1113 aa		13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	TMED8	Q6PL24	325 aa	Predicted RBP	13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	EDC3	Q96F86	508 aa	Known RBP	13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	XAGE2	Q96GT9	111 aa		13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	LAMA4	Q16363	1823 aa		13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	UQCRHL	A0A096LP55	91 aa		13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	UQCRH	P07919	91 aa		13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ZFY	P08048	801 aa	Predicted RBP	13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	SUSD4	Q5VX71	490 aa		13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	JAKMIP1	Q96N16	626 aa	Known RBP	13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	NEUROD6	Q96NK8	337 aa		13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	C8orf37	Q96NL8	207 aa		13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	DNAJC2	Q99543	621 aa	Known RBP	13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ZNF652	Q9Y2D9	606 aa		13.72	□□□□□ -0.21
SNRNP200-208	ENST00000497539	RNF113A	O15541	343 aa	Known RBP	13.71	□□□□□ -0.21
SNRNP200-208	ENST00000497539	ONECUT3	O60422	494 aa	Predicted RBP	13.71	□□□□□ -0.21
SNRNP200-208	ENST00000497539	PHF14	O94880	888 aa		13.71	□□□□□ -0.21
SNRNP200-208	ENST00000497539	CAST	P20810	708 aa	Known RBP	13.71	□□□□□ -0.21
SNRNP200-208	ENST00000497539	GDPD2	Q9HCC8	539 aa		13.71	□□□□□ -0.21
SNRNP200-208	ENST00000497539	FGFR2	P21802	821 aa		13.71	□□□□□ -0.22
SNRNP200-208	ENST00000497539	ATP2B3	Q16720	1220 aa		13.71	□□□□□ -0.22
SNRNP200-208	ENST00000497539	ADCK5	Q3MIX3	580 aa		13.71	□□□□□ -0.22
SNRNP200-208	ENST00000497539	LRSAM1	Q6UWE0	723 aa		13.71	□□□□□ -0.22
SNRNP200-208	ENST00000497539	SYNE4	Q8N205	404 aa		13.71	□□□□□ -0.22
SNRNP200-208	ENST00000497539	PDRG1	Q9NUG6	133 aa		13.71	□□□□□ -0.22
SNRNP200-208	ENST00000497539	MYCN	P04198	464 aa	Predicted RBP	13.7	□□□□□ -0.22
SNRNP200-208	ENST00000497539	ANKRD1	Q15327	319 aa		13.7	□□□□□ -0.22
SNRNP200-208	ENST00000497539	DDX46	Q7L014	1031 aa	Known RBP	13.7	□□□□□ -0.22
SNRNP200-208	ENST00000497539	LINC00116	Q8NCU8	138 aa		13.7	□□□□□ -0.22
SNRNP200-208	ENST00000497539	ZKSCAN5	Q9Y2L8	839 aa		13.7	□□□□□ -0.22
SNRNP200-208	ENST00000497539	C4A	P0C0L4	1744 aa		13.7	□□□□□ -0.22
SNRNP200-208	ENST00000497539	C4B	P0C0L5	1744 aa		13.7	□□□□□ -0.22
SNRNP200-208	ENST00000497539	GOLIM4	O00461	696 aa		13.7	□□□□□ -0.22
SNRNP200-208	ENST00000497539	KCNQ2	O43526	872 aa		13.7	□□□□□ -0.22
SNRNP200-208	ENST00000497539	CLSTN1	O94985	981 aa		13.7	□□□□□ -0.22
SNRNP200-208	ENST00000497539	ARID4A	P29374	1257 aa	Predicted RBP	13.7	□□□□□ -0.22
SNRNP200-208	ENST00000497539	ZNF500	O60304	480 aa	Predicted RBP	13.69	□□□□□ -0.22
SNRNP200-208	ENST00000497539	PDE8B	O95263	885 aa		13.69	□□□□□ -0.22

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