RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PBX4Q9BYU1 374 aa8.07□□□□□ -1.12
VPS36-206ENST00000497149 RASSF4Q9H2L5 321 aa8.07□□□□□ -1.12
VPS36-206ENST00000497149 MRS2Q9HD23 443 aa8.07□□□□□ -1.12
VPS36-206ENST00000497149 OIP5O43482 229 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 BCRP11274 1271 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 GSK3AP49840 483 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 ATP11AP98196 1134 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 ZNF385CQ66K41 422 aaPredicted RBP8.06□□□□□ -1.12
VPS36-206ENST00000497149 ELMSAN1Q6PJG2 1045 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 NXPE3Q969Y0 559 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 PLD4Q96BZ4 506 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 TCF12Q99081 682 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 SRCIN1Q9C0H9 1055 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 C12orf49Q9H741 205 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 LIN7BQ9HAP6 207 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 LRRC4BQ9NT99 713 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 PPP4R2Q9NY27 417 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 TRAK1Q9UPV9 953 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 STARD13Q9Y3M8 1113 aa8.06□□□□□ -1.12
VPS36-206ENST00000497149 PDE2AO00408 941 aaPredicted RBP8.05□□□□□ -1.12
VPS36-206ENST00000497149 EIF4BP23588 611 aaKnown RBP8.05□□□□□ -1.12
VPS36-206ENST00000497149 PSAPL1Q6NUJ1 521 aa8.05□□□□□ -1.12
VPS36-206ENST00000497149 LYPD4Q6UWN0 246 aa8.05□□□□□ -1.12
VPS36-206ENST00000497149 CCNJLQ8IV13 435 aa8.05□□□□□ -1.12
VPS36-206ENST00000497149 MICALL1Q8N3F8 863 aa8.05□□□□□ -1.12
VPS36-206ENST00000497149 TMEM102Q8N9M5 508 aaPredicted RBP8.05□□□□□ -1.12
VPS36-206ENST00000497149 GLIS3Q8NEA6 775 aa8.05□□□□□ -1.12
VPS36-206ENST00000497149 HHIPQ96QV1 700 aa8.05□□□□□ -1.12
VPS36-206ENST00000497149 POP1Q99575 1024 aaKnown RBP8.05□□□□□ -1.12
VPS36-206ENST00000497149 LPIN3Q9BQK8 851 aa8.05□□□□□ -1.12
VPS36-206ENST00000497149 SMG9Q9H0W8 520 aaKnown RBP8.05□□□□□ -1.12
VPS36-206ENST00000497149 FRRS1LQ9P0K9 344 aa8.05□□□□□ -1.12
VPS36-206ENST00000497149 SMNDC1O75940 238 aaKnown RBP eCLIP8.04□□□□□ -1.12
VPS36-206ENST00000497149 ARHGEF15O94989 841 aa8.04□□□□□ -1.12
VPS36-206ENST00000497149 CELA2BP08218 269 aaPredicted RBP8.04□□□□□ -1.12
VPS36-206ENST00000497149 CEP135Q66GS9 1140 aa8.04□□□□□ -1.12
VPS36-206ENST00000497149 PRPF40BQ6NWY9 871 aaKnown RBP8.04□□□□□ -1.12
VPS36-206ENST00000497149 TTC9Q92623 222 aa8.04□□□□□ -1.12
VPS36-206ENST00000497149 BTBD6Q96KE9 485 aa8.04□□□□□ -1.12
VPS36-206ENST00000497149 BHLHE41Q9C0J9 482 aaPredicted RBP8.04□□□□□ -1.12
VPS36-206ENST00000497149 FAM8A1Q9UBU6 413 aa8.04□□□□□ -1.12
VPS36-206ENST00000497149 VTI1BQ9UEU0 232 aa8.04□□□□□ -1.12
VPS36-206ENST00000497149 ADAMTS8Q9UP79 889 aa8.04□□□□□ -1.12
VPS36-206ENST00000497149 RGS9O75916 674 aaPredicted RBP8.03□□□□□ -1.12
VPS36-206ENST00000497149 C20orf204Q6ZNR8 217 aa8.03□□□□□ -1.12
VPS36-206ENST00000497149 WHAMMQ8TF30 809 aa8.03□□□□□ -1.12
VPS36-206ENST00000497149 NUDT8Q8WV74 236 aa8.03□□□□□ -1.12
VPS36-206ENST00000497149 BACH2Q9BYV9 841 aa8.03□□□□□ -1.12
VPS36-206ENST00000497149 TMEM238LA0A1B0GVL6 79 aa8.02□□□□□ -1.13
VPS36-206ENST00000497149 SHISA8B8ZZ34 492 aa8.02□□□□□ -1.13
VPS36-206ENST00000497149 CTSHP09668 335 aa8.02□□□□□ -1.13
VPS36-206ENST00000497149 GRIA4P48058 902 aa8.02□□□□□ -1.13
VPS36-206ENST00000497149 LDLRAD1Q5T700 205 aa8.02□□□□□ -1.13
VPS36-206ENST00000497149 KANK3Q6NY19 840 aa8.02□□□□□ -1.13
VPS36-206ENST00000497149 CHSY3Q70JA7 882 aa8.02□□□□□ -1.13
VPS36-206ENST00000497149 SVOPQ8N4V2 548 aa8.02□□□□□ -1.13
VPS36-206ENST00000497149 ABCB6Q9NP58 842 aa8.02□□□□□ -1.13
VPS36-206ENST00000497149 METTL12A8MUP2 240 aa8.01□□□□□ -1.13
VPS36-206ENST00000497149 GSTT1P30711 240 aa8.01□□□□□ -1.13
VPS36-206ENST00000497149 FCGRTP55899 365 aa8.01□□□□□ -1.13
VPS36-206ENST00000497149 SPRED3Q2MJR0 410 aa8.01□□□□□ -1.13
VPS36-206ENST00000497149 TSNAXIP1Q2TAA8 658 aa8.01□□□□□ -1.13
VPS36-206ENST00000497149 TRIM33Q9UPN9 1127 aa8.01□□□□□ -1.13
VPS36-206ENST00000497149 A0A096LPE4 126 aa8□□□□□ -1.13
VPS36-206ENST00000497149 A0A1W2PPZ6 126 aa8□□□□□ -1.13
VPS36-206ENST00000497149 RECKO95980 971 aa8□□□□□ -1.13
VPS36-206ENST00000497149 ALBP02768 609 aa8□□□□□ -1.13
VPS36-206ENST00000497149 USP17L7P0C7H9 530 aa8□□□□□ -1.13
VPS36-206ENST00000497149 XRCC5P13010 732 aaKnown RBP8□□□□□ -1.13
VPS36-206ENST00000497149 ADAMTSL4Q6UY14 1074 aa8□□□□□ -1.13
VPS36-206ENST00000497149 TMEM151AQ8N4L1 468 aa8□□□□□ -1.13
VPS36-206ENST00000497149 C3orf58Q8NDZ4 430 aa8□□□□□ -1.13
VPS36-206ENST00000497149 ASAP3Q8TDY4 903 aa8□□□□□ -1.13
VPS36-206ENST00000497149 JPH1Q9HDC5 661 aaPredicted RBP8□□□□□ -1.13
VPS36-206ENST00000497149 M0R082 166 aa7.99□□□□□ -1.13
VPS36-206ENST00000497149 AMPD1P23109 780 aa7.99□□□□□ -1.13
VPS36-206ENST00000497149 ITPKAP23677 461 aa7.99□□□□□ -1.13
VPS36-206ENST00000497149 RASSF7Q02833 373 aa7.99□□□□□ -1.13
VPS36-206ENST00000497149 PTPN12Q05209 780 aaKnown RBP7.99□□□□□ -1.13
VPS36-206ENST00000497149 GRIK5Q16478 980 aa7.99□□□□□ -1.13
VPS36-206ENST00000497149 GDF6Q6KF10 455 aaPredicted RBP7.99□□□□□ -1.13
VPS36-206ENST00000497149 DTHD1Q6ZMT9 781 aa7.99□□□□□ -1.13
VPS36-206ENST00000497149 ZNF417Q8TAU3 575 aa7.99□□□□□ -1.13
VPS36-206ENST00000497149 BSNDQ8WZ55 320 aa7.99□□□□□ -1.13
VPS36-206ENST00000497149 CRELD1Q96HD1 420 aa7.99□□□□□ -1.13
VPS36-206ENST00000497149 ZNF587Q96SQ5 575 aaPredicted RBP7.99□□□□□ -1.13
VPS36-206ENST00000497149 LACRTQ9GZZ8 138 aa7.99□□□□□ -1.13
VPS36-206ENST00000497149 ADAM19Q9H013 955 aa7.99□□□□□ -1.13
VPS36-206ENST00000497149 LILRB5O75023 590 aa7.98□□□□□ -1.13
VPS36-206ENST00000497149 PTPRAP18433 802 aa7.98□□□□□ -1.13
VPS36-206ENST00000497149 AFF1P51825 1210 aaKnown RBP7.98□□□□□ -1.13
VPS36-206ENST00000497149 MAP3K10Q02779 954 aa7.98□□□□□ -1.13
VPS36-206ENST00000497149 C8orf86Q6ZUL3 223 aa7.98□□□□□ -1.13
VPS36-206ENST00000497149 CACTIN-AS1Q8N1I8 211 aa7.98□□□□□ -1.13
VPS36-206ENST00000497149 TMEM87AQ8NBN3 555 aa7.98□□□□□ -1.13
VPS36-206ENST00000497149 MUC3BQ9H195 1237 aa7.98□□□□□ -1.13
VPS36-206ENST00000497149 ZFYVE1Q9HBF4 777 aa7.98□□□□□ -1.13
VPS36-206ENST00000497149 USP31Q70CQ4 1352 aa7.97□□□□□ -1.13
VPS36-206ENST00000497149 GDF11O95390 407 aa7.97□□□□□ -1.13
VPS36-206ENST00000497149 TAF1CQ15572 869 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms