RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 COL9A3Q14050 684 aaPredicted RBP16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 TXNRD1Q16881 649 aa16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 ZGPATQ8N5A5 531 aaKnown RBP16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 IL27Q8NEV9 243 aa16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 OSBP2Q969R2 916 aa16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 JAKMIP1Q96N16 626 aaKnown RBP16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 NLRP3Q96P20 1036 aa16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 ZSWIM6Q9HCJ5 1215 aa16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 BSDC1Q9NW68 430 aaPredicted RBP16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 MAST3O60307 1309 aa16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 ZKSCAN1P17029 563 aaPredicted RBP16.41■□□□□ 0.22
SPTBN1-205ENST00000496323 VPS53Q5VIR6 699 aa16.41■□□□□ 0.22
SPTBN1-205ENST00000496323 NOL8Q76FK4 1167 aaKnown RBP16.41■□□□□ 0.22
SPTBN1-205ENST00000496323 WTIPA6NIX2 430 aaPredicted RBP16.41■□□□□ 0.22
SPTBN1-205ENST00000496323 M0R2C6 588 aa16.41■□□□□ 0.22
SPTBN1-205ENST00000496323 TM4SF1P30408 202 aa16.41■□□□□ 0.22
SPTBN1-205ENST00000496323 CUL4AQ13619 759 aa16.41■□□□□ 0.22
SPTBN1-205ENST00000496323 TSGA10IPQ3SY00 556 aa16.41■□□□□ 0.22
SPTBN1-205ENST00000496323 SPEF2Q9C093 1822 aa16.41■□□□□ 0.22
SPTBN1-205ENST00000496323 C4AP0C0L4 1744 aa16.4■□□□□ 0.22
SPTBN1-205ENST00000496323 RPAP1Q9BWH6 1393 aaPredicted RBP16.4■□□□□ 0.22
SPTBN1-205ENST00000496323 UQCRFS1P1P0C7P4 283 aa16.4■□□□□ 0.22
SPTBN1-205ENST00000496323 GYS1P13807 737 aa16.4■□□□□ 0.22
SPTBN1-205ENST00000496323 PIH1D3Q9NQM4 214 aaKnown RBP16.4■□□□□ 0.22
SPTBN1-205ENST00000496323 HMG20BQ9P0W2 317 aa16.4■□□□□ 0.22
SPTBN1-205ENST00000496323 MINPP1Q9UNW1 487 aa16.4■□□□□ 0.22
SPTBN1-205ENST00000496323 CARMIL3Q8ND23 1372 aa16.4■□□□□ 0.22
SPTBN1-205ENST00000496323 ZFYP08048 801 aaPredicted RBP16.39■□□□□ 0.22
SPTBN1-205ENST00000496323 AK2P54819 239 aa16.39■□□□□ 0.22
SPTBN1-205ENST00000496323 RAB3GAP1Q15042 981 aa16.39■□□□□ 0.22
SPTBN1-205ENST00000496323 RXRBP28702 533 aa16.39■□□□□ 0.21
SPTBN1-205ENST00000496323 BCAMP50895 628 aa16.39■□□□□ 0.21
SPTBN1-205ENST00000496323 RASGRF1Q13972 1273 aa16.39■□□□□ 0.21
SPTBN1-205ENST00000496323 RNF20Q5VTR2 975 aa16.39■□□□□ 0.21
SPTBN1-205ENST00000496323 RUFY3Q7L099 469 aa16.39■□□□□ 0.21
SPTBN1-205ENST00000496323 U3KPZ7 1027 aaPredicted RBP16.39■□□□□ 0.21
SPTBN1-205ENST00000496323 RPS8P62241 208 aaKnown RBP16.38■□□□□ 0.21
SPTBN1-205ENST00000496323 DSCC1Q9BVC3 393 aa16.38■□□□□ 0.21
SPTBN1-205ENST00000496323 HSPD1P10809 573 aaKnown RBP16.38■□□□□ 0.21
SPTBN1-205ENST00000496323 LRRFIP1Q32MZ4 808 aaKnown RBP16.38■□□□□ 0.21
SPTBN1-205ENST00000496323 SPATA5Q8NB90 893 aa16.38■□□□□ 0.21
SPTBN1-205ENST00000496323 PUS7LQ9H0K6 701 aaKnown RBP16.38■□□□□ 0.21
SPTBN1-205ENST00000496323 RGS17Q9UGC6 210 aaPredicted RBP16.38■□□□□ 0.21
SPTBN1-205ENST00000496323 CYP46A1Q9Y6A2 500 aa16.38■□□□□ 0.21
SPTBN1-205ENST00000496323 PLSCR1O15162 318 aa16.37■□□□□ 0.21
SPTBN1-205ENST00000496323 CYP21A2P08686 494 aa16.37■□□□□ 0.21
SPTBN1-205ENST00000496323 TTF1Q15361 905 aaPredicted RBP16.37■□□□□ 0.21
SPTBN1-205ENST00000496323 APPBP2Q92624 585 aa16.37■□□□□ 0.21
SPTBN1-205ENST00000496323 TNPO1Q92973 898 aaKnown RBP16.37■□□□□ 0.21
SPTBN1-205ENST00000496323 LARP6Q9BRS8 491 aaKnown RBP16.37■□□□□ 0.21
SPTBN1-205ENST00000496323 CWC22Q9HCG8 908 aaKnown RBP16.37■□□□□ 0.21
SPTBN1-205ENST00000496323 PDRG1Q9NUG6 133 aa16.37■□□□□ 0.21
SPTBN1-205ENST00000496323 FOXP2O15409 715 aa16.37■□□□□ 0.21
SPTBN1-205ENST00000496323 ADD2P35612 726 aa16.37■□□□□ 0.21
SPTBN1-205ENST00000496323 WASHC4Q2M389 1173 aa16.37■□□□□ 0.21
SPTBN1-205ENST00000496323 CNBD1Q8NA66 436 aa16.37■□□□□ 0.21
SPTBN1-205ENST00000496323 PRR5LQ6MZQ0 368 aa16.36■□□□□ 0.21
SPTBN1-205ENST00000496323 ARAP2Q8WZ64 1704 aa16.36■□□□□ 0.21
SPTBN1-205ENST00000496323 APBA3O96018 575 aa16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 PSMA5P28066 241 aa16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 PKP1Q13835 747 aa16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 UBE4AQ14139 1066 aa16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 ZNF827Q17R98 1081 aa16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 SLC9C2Q5TAH2 1124 aa16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 INTS4Q96HW7 963 aaKnown RBP16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 LIMCH1Q9UPQ0 1083 aa16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 UBR3Q6ZT12 1888 aa16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 ZNF804BA4D1E1 1349 aa16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 A0A0G2JLW4 131 aa16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 NPHP1O15259 732 aa16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 IDH1O75874 414 aaKnown RBP16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 WWC3Q9ULE0 1092 aa16.35■□□□□ 0.21
SPTBN1-205ENST00000496323 AKAP11Q9UKA4 1901 aa16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 UBE3CQ15386 1083 aa16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 TCRBV5S4A2TA0A5A2 114 aa16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 LARGE1O95461 756 aa16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 PDE6AP16499 860 aa16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 RPS6KB1P23443 525 aa16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 MCM4P33991 863 aa16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 GYG1P46976 350 aa16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 DDR1Q08345 913 aa16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 ZSCAN25Q6NSZ9 544 aa16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 BLOC1S2Q6QNY1 142 aa16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 STOX1Q6ZVD7 989 aa16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 AKT1S1Q96B36 256 aa16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 TNRC6CQ9HCJ0 1690 aaKnown RBP16.34■□□□□ 0.21
SPTBN1-205ENST00000496323 SERPINB2P05120 415 aa16.33■□□□□ 0.2
SPTBN1-205ENST00000496323 KRT32Q14532 448 aa16.33■□□□□ 0.2
SPTBN1-205ENST00000496323 SLC51AQ86UW1 340 aa16.33■□□□□ 0.2
SPTBN1-205ENST00000496323 TCEANC2Q96MN5 208 aa16.33■□□□□ 0.2
SPTBN1-205ENST00000496323 ZNF532Q9HCE3 1301 aa16.33■□□□□ 0.2
SPTBN1-205ENST00000496323 GPAA1O43292 621 aa16.33■□□□□ 0.2
SPTBN1-205ENST00000496323 TTLL5Q6EMB2 1281 aa16.33■□□□□ 0.2
SPTBN1-205ENST00000496323 POTEAQ6S8J7 498 aa16.33■□□□□ 0.2
SPTBN1-205ENST00000496323 ZDHHC9Q9Y397 364 aa16.33■□□□□ 0.2
SPTBN1-205ENST00000496323 KLRK1P26718 216 aa16.32■□□□□ 0.2
SPTBN1-205ENST00000496323 FAM84BQ96KN1 310 aaPredicted RBP16.32■□□□□ 0.2
SPTBN1-205ENST00000496323 NEK1Q96PY6 1258 aa16.32■□□□□ 0.2
SPTBN1-205ENST00000496323 ALDH8A1Q9H2A2 487 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 1073.2 ms