RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	USP17L4	A6NCW7	530 aa		13.79	□□□□□ -0.2
DCTN1-223	ENST00000495643	TMEM88B	A6NKF7	163 aa		13.79	□□□□□ -0.2
DCTN1-223	ENST00000495643	EGFR	P00533	1210 aa		13.79	□□□□□ -0.2
DCTN1-223	ENST00000495643	FMR1	Q06787	632 aa	Known RBP eCLIP	13.79	□□□□□ -0.2	2e-6	■■■■□ 24.1
DCTN1-223	ENST00000495643	C15orf52	Q6ZUT6	534 aa	Known RBP	13.79	□□□□□ -0.2
DCTN1-223	ENST00000495643	USP17L1	Q7RTZ2	530 aa		13.79	□□□□□ -0.2
DCTN1-223	ENST00000495643	SAMD7	Q7Z3H4	446 aa		13.79	□□□□□ -0.2
DCTN1-223	ENST00000495643	AGBL3	Q8NEM8	1001 aa		13.79	□□□□□ -0.2
DCTN1-223	ENST00000495643	ARHGAP45	Q92619	1136 aa		13.79	□□□□□ -0.2
DCTN1-223	ENST00000495643	API5	Q9BZZ5	524 aa	Known RBP	13.79	□□□□□ -0.2
DCTN1-223	ENST00000495643	COA1	Q9GZY4	146 aa		13.79	□□□□□ -0.2
DCTN1-223	ENST00000495643	POLR2A	P24928	1970 aa	Known RBP	13.79	□□□□□ -0.2
DCTN1-223	ENST00000495643	ZNF280A	P59817	542 aa	Predicted RBP	13.78	□□□□□ -0.2
DCTN1-223	ENST00000495643	TAF7L	Q5H9L4	462 aa		13.78	□□□□□ -0.2
DCTN1-223	ENST00000495643	PUS3	Q9BZE2	481 aa	Known RBP	13.78	□□□□□ -0.2
DCTN1-223	ENST00000495643	CNNM1	Q9NRU3	951 aa		13.78	□□□□□ -0.2
DCTN1-223	ENST00000495643	RIPOR2	Q9Y4F9	1068 aa		13.78	□□□□□ -0.2
DCTN1-223	ENST00000495643	KIF16B	Q96L93	1317 aa		13.78	□□□□□ -0.2
DCTN1-223	ENST00000495643	TRAF5	O00463	557 aa		13.77	□□□□□ -0.21
DCTN1-223	ENST00000495643	KCNJ4	P48050	445 aa		13.77	□□□□□ -0.21
DCTN1-223	ENST00000495643	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.77	□□□□□ -0.21
DCTN1-223	ENST00000495643	DACT2	Q5SW24	774 aa		13.77	□□□□□ -0.21
DCTN1-223	ENST00000495643	STRIP1	Q5VSL9	837 aa		13.77	□□□□□ -0.21
DCTN1-223	ENST00000495643	ZBED9	Q6R2W3	1325 aa		13.76	□□□□□ -0.21
DCTN1-223	ENST00000495643	PLIN1	O60240	522 aa		13.76	□□□□□ -0.21
DCTN1-223	ENST00000495643	BCAR3	O75815	825 aa		13.76	□□□□□ -0.21
DCTN1-223	ENST00000495643	CST9	Q5W186	159 aa		13.76	□□□□□ -0.21
DCTN1-223	ENST00000495643	INTS3	Q68E01	1043 aa	Known RBP	13.76	□□□□□ -0.21
DCTN1-223	ENST00000495643	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.76	□□□□□ -0.21
DCTN1-223	ENST00000495643	CD209	Q9NNX6	404 aa		13.76	□□□□□ -0.21
DCTN1-223	ENST00000495643	CNTNAP1	P78357	1384 aa		13.75	□□□□□ -0.21
DCTN1-223	ENST00000495643	USP17L8	P0C7I0	530 aa		13.75	□□□□□ -0.21
DCTN1-223	ENST00000495643	RFX5	P48382	616 aa	Predicted RBP	13.75	□□□□□ -0.21
DCTN1-223	ENST00000495643	KIF4B	Q2VIQ3	1234 aa		13.75	□□□□□ -0.21
DCTN1-223	ENST00000495643	LRRC24	Q50LG9	513 aa		13.75	□□□□□ -0.21
DCTN1-223	ENST00000495643	RBM26	Q5T8P6	1007 aa	Known RBP	13.75	□□□□□ -0.21
DCTN1-223	ENST00000495643	TTLL5	Q6EMB2	1281 aa		13.75	□□□□□ -0.21
DCTN1-223	ENST00000495643	CDC37L1	Q7L3B6	337 aa		13.75	□□□□□ -0.21
DCTN1-223	ENST00000495643	MXD3	Q9BW11	206 aa		13.75	□□□□□ -0.21
DCTN1-223	ENST00000495643	MKRN1	Q9UHC7	482 aa	Known RBP	13.75	□□□□□ -0.21
DCTN1-223	ENST00000495643	MROH5	Q6ZUA9	1318 aa		13.74	□□□□□ -0.21
DCTN1-223	ENST00000495643	MYO3B	Q8WXR4	1341 aa		13.74	□□□□□ -0.21
DCTN1-223	ENST00000495643	IPO8	O15397	1037 aa	Known RBP	13.74	□□□□□ -0.21
DCTN1-223	ENST00000495643	UBTFL1	P0CB47	393 aa	Predicted RBP	13.74	□□□□□ -0.21
DCTN1-223	ENST00000495643	TRIM27	P14373	513 aa		13.74	□□□□□ -0.21
DCTN1-223	ENST00000495643	IL1R1	P14778	569 aa		13.74	□□□□□ -0.21
DCTN1-223	ENST00000495643	UBE4A	Q14139	1066 aa		13.74	□□□□□ -0.21
DCTN1-223	ENST00000495643	KLHDC4	Q8TBB5	520 aa		13.74	□□□□□ -0.21
DCTN1-223	ENST00000495643	RASSF10	A6NK89	507 aa		13.73	□□□□□ -0.21
DCTN1-223	ENST00000495643	GTF2I	P78347	998 aa		13.73	□□□□□ -0.21
DCTN1-223	ENST00000495643	ATF7IP	Q6VMQ6	1270 aa		13.73	□□□□□ -0.21
DCTN1-223	ENST00000495643	ZNF804A	Q7Z570	1209 aa		13.73	□□□□□ -0.21
DCTN1-223	ENST00000495643	USP48	Q86UV5	1035 aa		13.73	□□□□□ -0.21
DCTN1-223	ENST00000495643	VGLL2	Q8N8G2	317 aa		13.73	□□□□□ -0.21
DCTN1-223	ENST00000495643	MEIS3	Q99687	375 aa		13.73	□□□□□ -0.21
DCTN1-223	ENST00000495643	MYOZ2	Q9NPC6	264 aa		13.73	□□□□□ -0.21
DCTN1-223	ENST00000495643	TNN	Q9UQP3	1299 aa		13.73	□□□□□ -0.21
DCTN1-223	ENST00000495643	ASTN2	O75129	1339 aa	Predicted RBP	13.72	□□□□□ -0.21
DCTN1-223	ENST00000495643	VEGFB	P49765	207 aa		13.72	□□□□□ -0.21
DCTN1-223	ENST00000495643	PTPN12	Q05209	780 aa	Known RBP	13.72	□□□□□ -0.21
DCTN1-223	ENST00000495643	SCARF1	Q14162	830 aa		13.72	□□□□□ -0.21
DCTN1-223	ENST00000495643	DLK2	Q6UY11	383 aa		13.72	□□□□□ -0.21
DCTN1-223	ENST00000495643	FRAT1	Q92837	279 aa	Predicted RBP	13.72	□□□□□ -0.21
DCTN1-223	ENST00000495643	FBXW7	Q969H0	707 aa		13.72	□□□□□ -0.21
DCTN1-223	ENST00000495643	DCPS	Q96C86	337 aa	Known RBP	13.72	□□□□□ -0.21
DCTN1-223	ENST00000495643	LRRFIP2	Q9Y608	721 aa	Known RBP	13.72	□□□□□ -0.21
DCTN1-223	ENST00000495643	CELF2	O95319	508 aa	Known RBP	13.71	□□□□□ -0.21
DCTN1-223	ENST00000495643	MMP14	P50281	582 aa		13.71	□□□□□ -0.21
DCTN1-223	ENST00000495643	DEFB115	Q30KQ5	88 aa		13.71	□□□□□ -0.21
DCTN1-223	ENST00000495643	METTL24	Q5JXM2	366 aa		13.71	□□□□□ -0.21
DCTN1-223	ENST00000495643	KRT26	Q7Z3Y9	468 aa		13.71	□□□□□ -0.21
DCTN1-223	ENST00000495643	CERS5	Q8N5B7	392 aa		13.71	□□□□□ -0.21
DCTN1-223	ENST00000495643	FAM84B	Q96KN1	310 aa	Predicted RBP	13.71	□□□□□ -0.21
DCTN1-223	ENST00000495643	HDAC5	Q9UQL6	1122 aa		13.71	□□□□□ -0.21
DCTN1-223	ENST00000495643	TLL2	Q9Y6L7	1015 aa		13.71	□□□□□ -0.21
DCTN1-223	ENST00000495643	ADM5	C9JUS6	153 aa		13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	EYA2	O00167	538 aa		13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	SASH1	O94885	1247 aa		13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	PDE8B	O95263	885 aa		13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	HIBADH	P31937	336 aa	Known RBP	13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	GYG1	P46976	350 aa		13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	FKBP1A	P62942	108 aa	Known RBP	13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	ATG9A	Q7Z3C6	839 aa		13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	FBXO33	Q7Z6M2	555 aa		13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	KIAA0825	Q8IV33	1275 aa		13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	OGFOD1	Q8N543	542 aa		13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	TDRD7	Q8NHU6	1098 aa	Known RBP	13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	GGA3	Q9NZ52	723 aa		13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	ABT1	Q9ULW3	272 aa	Known RBP	13.7	□□□□□ -0.22
DCTN1-223	ENST00000495643	FAM205A	Q6ZU69	1335 aa		13.69	□□□□□ -0.22
DCTN1-223	ENST00000495643	PITPNM2	Q9BZ72	1349 aa		13.69	□□□□□ -0.22
DCTN1-223	ENST00000495643	GNAI3	P08754	354 aa		13.69	□□□□□ -0.22
DCTN1-223	ENST00000495643	NBPF9	Q3BBW0	867 aa		13.69	□□□□□ -0.22
DCTN1-223	ENST00000495643	ANGEL2	Q5VTE6	544 aa	Known RBP	13.69	□□□□□ -0.22
DCTN1-223	ENST00000495643	ZKSCAN2	Q63HK3	967 aa		13.69	□□□□□ -0.22
DCTN1-223	ENST00000495643	SAPCD2	Q86UD0	394 aa		13.69	□□□□□ -0.22
DCTN1-223	ENST00000495643	CLUAP1	Q96AJ1	413 aa		13.69	□□□□□ -0.22
DCTN1-223	ENST00000495643	ZBED3	Q96IU2	234 aa	Predicted RBP	13.69	□□□□□ -0.22
DCTN1-223	ENST00000495643	FBXO3	Q9UK99	471 aa		13.69	□□□□□ -0.22
DCTN1-223	ENST00000495643	ARAP2	Q8WZ64	1704 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms