RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ARHGAP6O43182 974 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 NR1I2O75469 434 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 SFPQP23246 707 aaKnown RBP eCLIP5.55□□□□□ -1.52
PRKD3-210ENST00000494667 ELF1P32519 619 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 PLCB2Q00722 1185 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 TBX2Q13207 712 aaPredicted RBP5.55□□□□□ -1.52
PRKD3-210ENST00000494667 DRP2Q13474 957 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 GBP6Q6ZN66 633 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 SRGAP1Q7Z6B7 1085 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 CEP57L1Q8IYX8 460 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 TSPYL6Q8N831 410 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 GPATCH11Q8N954 259 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 RNF217Q8TC41 542 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 CARD6Q9BX69 1037 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 GOLIM4O00461 696 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 CHUKO15111 745 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 CCT4P50991 539 aaKnown RBP5.55□□□□□ -1.52
PRKD3-210ENST00000494667 ANKRD1Q15327 319 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 FOXR1Q6PIV2 292 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 CEP112Q8N8E3 955 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 PDRG1Q9NUG6 133 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 USP16Q9Y5T5 823 aa5.55□□□□□ -1.52
PRKD3-210ENST00000494667 MRC1P22897 1456 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 TMEM131LA2VDJ0 1609 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 EXOC5O00471 708 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 FECHP22830 423 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 SSR1P43307 286 aaKnown RBP5.54□□□□□ -1.52
PRKD3-210ENST00000494667 SLC8A3P57103 927 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 KIF4BQ2VIQ3 1234 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 NBPF5PQ86XG9 351 aaPredicted RBP5.54□□□□□ -1.52
PRKD3-210ENST00000494667 MAB21L3Q8N8X9 362 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 SPATA32Q96LK8 384 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 LRRCC1Q9C099 1032 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 FBXO3Q9UK99 471 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 A0A1W2PQ27 194 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 A0A1W2PQ64 194 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 A0A1W2PQD8 194 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 RAB11FIP3O75154 756 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 LARGE1O95461 756 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 ADD1P35611 737 aaKnown RBP5.54□□□□□ -1.52
PRKD3-210ENST00000494667 ADCY2Q08462 1091 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 TLDC1Q6P9B6 456 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 EP400NLQ6ZTU2 488 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 CCAR1Q8IX12 1150 aaKnown RBP5.54□□□□□ -1.52
PRKD3-210ENST00000494667 ELOA2Q8IYF1 753 aaPredicted RBP5.54□□□□□ -1.52
PRKD3-210ENST00000494667 CABS1Q96KC9 395 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 ANO2Q9NQ90 1003 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 TOMM22Q9NS69 142 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 ANKRD18BA2A2Z9 1011 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 NCAPHQ15003 741 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 PI4K2BQ8TCG2 481 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 TRMT1Q9NXH9 659 aaKnown RBP5.54□□□□□ -1.52
PRKD3-210ENST00000494667 CFAP45Q9UL16 551 aa5.54□□□□□ -1.52
PRKD3-210ENST00000494667 MLH3Q9UHC1 1453 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 PARP4Q9UKK3 1724 aaKnown RBP5.53□□□□□ -1.52
PRKD3-210ENST00000494667 MAP3K15Q6ZN16 1313 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 CDHR2Q9BYE9 1310 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 IRF6O14896 467 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 CUTAO60888 179 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 RCSD1Q6JBY9 416 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 CNNM3Q8NE01 707 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 UPF3BQ9BZI7 483 aaKnown RBP5.53□□□□□ -1.52
PRKD3-210ENST00000494667 PDE11AQ9HCR9 933 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 VPS18Q9P253 973 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 STX10O60499 249 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 MCM3P25205 808 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 ATP8B2P98198 1209 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 FAM160A1Q05DH4 1040 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 NAA16Q6N069 864 aaPredicted RBP5.53□□□□□ -1.52
PRKD3-210ENST00000494667 CDC37L1Q7L3B6 337 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 CKAP2LQ8IYA6 745 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 FAN1Q9Y2M0 1017 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 CRB1P82279 1406 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 TARSL2A2RTX5 802 aaKnown RBP5.53□□□□□ -1.52
PRKD3-210ENST00000494667 CBFA2T2O43439 604 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 SYF2O95926 243 aaKnown RBP5.53□□□□□ -1.52
PRKD3-210ENST00000494667 SKOR1P84550 965 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 NECTIN1Q15223 517 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.53□□□□□ -1.52
PRKD3-210ENST00000494667 C1orf131Q8NDD1 294 aaKnown RBP5.53□□□□□ -1.52
PRKD3-210ENST00000494667 ERCC4Q92889 916 aaPredicted RBP5.53□□□□□ -1.52
PRKD3-210ENST00000494667 IL25Q9H293 177 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 HOMER3Q9NSC5 361 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 SH3BP1Q9Y3L3 701 aa5.53□□□□□ -1.52
PRKD3-210ENST00000494667 CASZ1Q86V15 1759 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 RFX7Q2KHR2 1363 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 RASSF9O75901 435 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 EPB41P11171 864 aaKnown RBP5.52□□□□□ -1.53
PRKD3-210ENST00000494667 SCRN1Q12765 414 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 E2F4Q16254 413 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 ME3Q16798 604 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 CCDC50Q8IVM0 306 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 VSTM4Q8IW00 320 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 RASEFQ8IZ41 740 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 C8orf58Q8NAV2 365 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 AFAP1L1Q8TED9 768 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 LLPHQ9BRT6 129 aaKnown RBP5.52□□□□□ -1.53
PRKD3-210ENST00000494667 HSD3B7Q9H2F3 369 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 LAMA4Q16363 1823 aa5.52□□□□□ -1.53
PRKD3-210ENST00000494667 CHL1O00533 1208 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms