RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 G3V3G9 751 aa19.39■□□□□ 0.69
HPS4-216ENST00000493455 PPIP5K2O43314 1243 aa19.39■□□□□ 0.69
HPS4-216ENST00000493455 UBE4AQ14139 1066 aa19.39■□□□□ 0.69
HPS4-216ENST00000493455 AOC3Q16853 763 aa19.39■□□□□ 0.69
HPS4-216ENST00000493455 WASHC4Q2M389 1173 aa19.39■□□□□ 0.69
HPS4-216ENST00000493455 GRIPAP1Q4V328 841 aa19.39■□□□□ 0.69
HPS4-216ENST00000493455 DCAF8Q5TAQ9 597 aa19.39■□□□□ 0.69
HPS4-216ENST00000493455 CLASRPQ8N2M8 674 aaKnown RBP19.39■□□□□ 0.69
HPS4-216ENST00000493455 SBF1O95248 1867 aa19.38■□□□□ 0.69
HPS4-216ENST00000493455 IFIT2P09913 472 aaKnown RBP19.38■□□□□ 0.69
HPS4-216ENST00000493455 ADORA1P30542 326 aa19.38■□□□□ 0.69
HPS4-216ENST00000493455 GORABQ5T7V8 394 aa19.38■□□□□ 0.69
HPS4-216ENST00000493455 SMC5Q8IY18 1101 aa19.38■□□□□ 0.69
HPS4-216ENST00000493455 LPIN2Q92539 896 aa19.38■□□□□ 0.69
HPS4-216ENST00000493455 PSMD1Q99460 953 aa19.38■□□□□ 0.69
HPS4-216ENST00000493455 ZC3H12CQ9C0D7 883 aaKnown RBP19.38■□□□□ 0.69
HPS4-216ENST00000493455 LNPKQ9C0E8 428 aa19.38■□□□□ 0.69
HPS4-216ENST00000493455 SRCAPQ6ZRS2 3230 aa19.38■□□□□ 0.69
HPS4-216ENST00000493455 MYH13Q9UKX3 1938 aa19.37■□□□□ 0.69
HPS4-216ENST00000493455 GRIN3BO60391 1043 aa19.37■□□□□ 0.69
HPS4-216ENST00000493455 FGFR2P21802 821 aa19.37■□□□□ 0.69
HPS4-216ENST00000493455 GYG1P46976 350 aa19.37■□□□□ 0.69
HPS4-216ENST00000493455 DOK7Q18PE1 504 aa19.37■□□□□ 0.69
HPS4-216ENST00000493455 CENPQQ7L2Z9 268 aaPredicted RBP19.37■□□□□ 0.69
HPS4-216ENST00000493455 TXNRD3Q86VQ6 643 aa19.37■□□□□ 0.69
HPS4-216ENST00000493455 VPS37DQ86XT2 251 aa19.37■□□□□ 0.69
HPS4-216ENST00000493455 LARGE2Q8N3Y3 721 aa19.37■□□□□ 0.69
HPS4-216ENST00000493455 EAF2Q96CJ1 260 aaPredicted RBP19.37■□□□□ 0.69
HPS4-216ENST00000493455 TLR7Q9NYK1 1049 aaKnown RBP19.37■□□□□ 0.69
HPS4-216ENST00000493455 MED23Q9ULK4 1368 aa19.36■□□□□ 0.69
HPS4-216ENST00000493455 CHD4Q14839 1912 aa19.36■□□□□ 0.69
HPS4-216ENST00000493455 IARSP41252 1262 aaKnown RBP19.36■□□□□ 0.69
HPS4-216ENST00000493455 XAGE2Q96GT9 111 aa19.36■□□□□ 0.69
HPS4-216ENST00000493455 DBNDD2Q9BQY9 259 aa19.36■□□□□ 0.69
HPS4-216ENST00000493455 RTFDC1Q9BY42 306 aaPredicted RBP19.36■□□□□ 0.69
HPS4-216ENST00000493455 KDM2BQ8NHM5 1336 aa19.35■□□□□ 0.69
HPS4-216ENST00000493455 CAVIN4Q5BKX8 364 aa19.35■□□□□ 0.69
HPS4-216ENST00000493455 C16orf71Q8IYS4 520 aaPredicted RBP19.35■□□□□ 0.69
HPS4-216ENST00000493455 FBXW7Q969H0 707 aa19.35■□□□□ 0.69
HPS4-216ENST00000493455 DBNDD1Q9H9R9 158 aa19.35■□□□□ 0.69
HPS4-216ENST00000493455 GPR108Q9NPR9 543 aa19.35■□□□□ 0.69
HPS4-216ENST00000493455 IQSEC3Q9UPP2 1182 aaPredicted RBP19.35■□□□□ 0.69
HPS4-216ENST00000493455 BCAMP50895 628 aa19.34■□□□□ 0.69
HPS4-216ENST00000493455 ZNF804AQ7Z570 1209 aa19.34■□□□□ 0.69
HPS4-216ENST00000493455 CHD1LQ86WJ1 897 aa19.34■□□□□ 0.69
HPS4-216ENST00000493455 DICER1Q9UPY3 1922 aaKnown RBP19.33■□□□□ 0.69
HPS4-216ENST00000493455 LTBP3Q9NS15 1303 aa19.33■□□□□ 0.69
HPS4-216ENST00000493455 FRAT2O75474 233 aaPredicted RBP19.33■□□□□ 0.68
HPS4-216ENST00000493455 PRELPP51888 382 aa19.33■□□□□ 0.68
HPS4-216ENST00000493455 NUCB1Q02818 461 aa19.33■□□□□ 0.68
HPS4-216ENST00000493455 KIAA2012Q0VF49 1180 aa19.33■□□□□ 0.68
HPS4-216ENST00000493455 TTC39AQ5SRH9 613 aa19.33■□□□□ 0.68
HPS4-216ENST00000493455 NIM1KQ8IY84 436 aa19.33■□□□□ 0.68
HPS4-216ENST00000493455 OTUD7AQ8TE49 926 aaPredicted RBP19.33■□□□□ 0.68
HPS4-216ENST00000493455 RNF181Q9P0P0 153 aa19.33■□□□□ 0.68
HPS4-216ENST00000493455 DBNLQ9UJU6 430 aaKnown RBP19.33■□□□□ 0.68
HPS4-216ENST00000493455 TIAM2Q8IVF5 1701 aa19.33■□□□□ 0.68
HPS4-216ENST00000493455 ECE2O60344 883 aa19.32■□□□□ 0.68
HPS4-216ENST00000493455 HIBADHP31937 336 aaKnown RBP19.32■□□□□ 0.68
HPS4-216ENST00000493455 PHKA1P46020 1223 aa19.32■□□□□ 0.68
HPS4-216ENST00000493455 FAM84BQ96KN1 310 aaPredicted RBP19.32■□□□□ 0.68
HPS4-216ENST00000493455 COL4A5P29400 1685 aa19.32■□□□□ 0.68
HPS4-216ENST00000493455 LMNB1P20700 586 aa19.31■□□□□ 0.68
HPS4-216ENST00000493455 CCDC158Q5M9N0 1113 aa19.31■□□□□ 0.68
HPS4-216ENST00000493455 TSHZ3Q63HK5 1081 aa19.31■□□□□ 0.68
HPS4-216ENST00000493455 CCDC102BQ68D86 513 aa19.31■□□□□ 0.68
HPS4-216ENST00000493455 SKAP1Q86WV1 359 aa19.31■□□□□ 0.68
HPS4-216ENST00000493455 JDP2Q8WYK2 163 aa19.31■□□□□ 0.68
HPS4-216ENST00000493455 JAG2Q9Y219 1238 aa19.31■□□□□ 0.68
HPS4-216ENST00000493455 IRS2Q9Y4H2 1338 aa19.3■□□□□ 0.68
HPS4-216ENST00000493455 CHAF1AQ13111 956 aaPredicted RBP19.3■□□□□ 0.68
HPS4-216ENST00000493455 C9orf131Q5VYM1 1079 aa19.3■□□□□ 0.68
HPS4-216ENST00000493455 C15orf52Q6ZUT6 534 aaKnown RBP19.29■□□□□ 0.68
HPS4-216ENST00000493455 GPATCH3Q96I76 525 aa19.29■□□□□ 0.68
HPS4-216ENST00000493455 COA1Q9GZY4 146 aa19.29■□□□□ 0.68
HPS4-216ENST00000493455 CD209Q9NNX6 404 aa19.29■□□□□ 0.68
HPS4-216ENST00000493455 GNL3LQ9NVN8 582 aaKnown RBP19.29■□□□□ 0.68
HPS4-216ENST00000493455 SCN9AQ15858 1988 aa19.28■□□□□ 0.68
HPS4-216ENST00000493455 GOLGB1Q14789 3259 aaKnown RBP19.28■□□□□ 0.68
HPS4-216ENST00000493455 FBXO33Q7Z6M2 555 aa19.28■□□□□ 0.68
HPS4-216ENST00000493455 MX1P20591 662 aa19.27■□□□□ 0.68
HPS4-216ENST00000493455 VPS33BQ9H267 617 aa19.27■□□□□ 0.68
HPS4-216ENST00000493455 KCNQ5Q9NR82 932 aa19.27■□□□□ 0.68
HPS4-216ENST00000493455 SNRKQ9NRH2 765 aa19.27■□□□□ 0.68
HPS4-216ENST00000493455 YDJCA8MPS7 323 aa19.26■□□□□ 0.67
HPS4-216ENST00000493455 RAD17O75943 681 aa19.26■□□□□ 0.67
HPS4-216ENST00000493455 PDE4AP27815 886 aa19.26■□□□□ 0.67
HPS4-216ENST00000493455 RGS3P49796 1198 aa19.26■□□□□ 0.67
HPS4-216ENST00000493455 PI16Q6UXB8 463 aa19.26■□□□□ 0.67
HPS4-216ENST00000493455 ZNRF3Q9ULT6 936 aa19.26■□□□□ 0.67
HPS4-216ENST00000493455 NDUFB9Q9Y6M9 179 aa19.26■□□□□ 0.67
HPS4-216ENST00000493455 UQCRFS1P1P0C7P4 283 aa19.25■□□□□ 0.67
HPS4-216ENST00000493455 GTF2IP78347 998 aa19.25■□□□□ 0.67
HPS4-216ENST00000493455 SCARF1Q14162 830 aa19.25■□□□□ 0.67
HPS4-216ENST00000493455 DNAJC2Q99543 621 aaKnown RBP19.25■□□□□ 0.67
HPS4-216ENST00000493455 BOLA2Q9H3K6 86 aa19.25■□□□□ 0.67
HPS4-216ENST00000493455 ECHDC1Q9NTX5 307 aa19.25■□□□□ 0.67
HPS4-216ENST00000493455 AKAP11Q9UKA4 1901 aa19.24■□□□□ 0.67
HPS4-216ENST00000493455 PSME4Q14997 1843 aa19.24■□□□□ 0.67
HPS4-216ENST00000493455 IL1R1P14778 569 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms