RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 TXNRD3Q86VQ6 643 aa11.54□□□□□ -0.56
CSTF1-206ENST00000493039 SPEF2Q9C093 1822 aa11.54□□□□□ -0.56
CSTF1-206ENST00000493039 A0A1B0GUL7 405 aa11.54□□□□□ -0.56
CSTF1-206ENST00000493039 ADORA1P30542 326 aa11.54□□□□□ -0.56
CSTF1-206ENST00000493039 GPR101Q96P66 508 aaPredicted RBP11.54□□□□□ -0.56
CSTF1-206ENST00000493039 CCDC8Q9H0W5 538 aaPredicted RBP11.54□□□□□ -0.56
CSTF1-206ENST00000493039 DBNLQ9UJU6 430 aaKnown RBP11.54□□□□□ -0.56
CSTF1-206ENST00000493039 BRCA1P38398 1863 aaKnown RBP11.53□□□□□ -0.56
CSTF1-206ENST00000493039 XDHP47989 1333 aa11.53□□□□□ -0.56
CSTF1-206ENST00000493039 TBC1D16Q8TBP0 767 aa11.53□□□□□ -0.56
CSTF1-206ENST00000493039 DBNDD2Q9BQY9 259 aa11.53□□□□□ -0.56
CSTF1-206ENST00000493039 ANKRD2Q9GZV1 360 aa11.53□□□□□ -0.56
CSTF1-206ENST00000493039 ANKIB1Q9P2G1 1089 aa11.53□□□□□ -0.56
CSTF1-206ENST00000493039 BCS1LQ9Y276 419 aa11.53□□□□□ -0.56
CSTF1-206ENST00000493039 LRRC37AA6NMS7 1700 aa11.53□□□□□ -0.56
CSTF1-206ENST00000493039 UBE4AQ14139 1066 aa11.52□□□□□ -0.56
CSTF1-206ENST00000493039 PUM3Q15397 648 aaKnown RBP11.52□□□□□ -0.56
CSTF1-206ENST00000493039 ATP2B3Q16720 1220 aa11.52□□□□□ -0.56
CSTF1-206ENST00000493039 AACSQ86V21 672 aa11.52□□□□□ -0.56
CSTF1-206ENST00000493039 CLASRPQ8N2M8 674 aaKnown RBP11.52□□□□□ -0.56
CSTF1-206ENST00000493039 DUOX1Q9NRD9 1551 aa11.52□□□□□ -0.56
CSTF1-206ENST00000493039 ZNF609O15014 1411 aa11.52□□□□□ -0.57
CSTF1-206ENST00000493039 LTBP1Q14766 1721 aa11.52□□□□□ -0.57
CSTF1-206ENST00000493039 ZNF804BA4D1E1 1349 aa11.52□□□□□ -0.57
CSTF1-206ENST00000493039 MPNDQ8N594 471 aa11.52□□□□□ -0.57
CSTF1-206ENST00000493039 LPIN2Q92539 896 aa11.52□□□□□ -0.57
CSTF1-206ENST00000493039 XAGE2Q96GT9 111 aa11.52□□□□□ -0.57
CSTF1-206ENST00000493039 RTFDC1Q9BY42 306 aaPredicted RBP11.52□□□□□ -0.57
CSTF1-206ENST00000493039 YBX3P16989 372 aaKnown RBP eCLIP11.51□□□□□ -0.571e-6■■□□□ 12.8
CSTF1-206ENST00000493039 TSHZ3Q63HK5 1081 aa11.51□□□□□ -0.57
CSTF1-206ENST00000493039 PLEKHM2Q8IWE5 1019 aa11.51□□□□□ -0.57
CSTF1-206ENST00000493039 NEUROD6Q96NK8 337 aa11.51□□□□□ -0.57
CSTF1-206ENST00000493039 AKAP2Q9Y2D5 859 aa11.51□□□□□ -0.57
CSTF1-206ENST00000493039 LEMD3Q9Y2U8 911 aa11.51□□□□□ -0.57
CSTF1-206ENST00000493039 UFL1O94874 794 aa11.51□□□□□ -0.57
CSTF1-206ENST00000493039 CC2D2BQ6DHV5 1058 aa11.51□□□□□ -0.57
CSTF1-206ENST00000493039 DPP8Q6V1X1 898 aaPredicted RBP11.51□□□□□ -0.57
CSTF1-206ENST00000493039 FAM84BQ96KN1 310 aaPredicted RBP11.51□□□□□ -0.57
CSTF1-206ENST00000493039 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
CSTF1-206ENST00000493039 GGA1Q9UJY5 639 aa11.51□□□□□ -0.57
CSTF1-206ENST00000493039 NFKBIEO00221 500 aa11.5□□□□□ -0.57
CSTF1-206ENST00000493039 BCAMP50895 628 aa11.5□□□□□ -0.57
CSTF1-206ENST00000493039 PRELPP51888 382 aa11.5□□□□□ -0.57
CSTF1-206ENST00000493039 A0A1B0GUL6 1792 aa11.5□□□□□ -0.57
CSTF1-206ENST00000493039 CACNA1SQ13698 1873 aa11.5□□□□□ -0.57
CSTF1-206ENST00000493039 ATP2B4P23634 1241 aa11.5□□□□□ -0.57
CSTF1-206ENST00000493039 PHKA1P46020 1223 aa11.5□□□□□ -0.57
CSTF1-206ENST00000493039 GYG1P46976 350 aa11.5□□□□□ -0.57
CSTF1-206ENST00000493039 PDE1AP54750 535 aa11.5□□□□□ -0.57
CSTF1-206ENST00000493039 CCDC93Q567U6 631 aa11.5□□□□□ -0.57
CSTF1-206ENST00000493039 C15orf52Q6ZUT6 534 aaKnown RBP11.5□□□□□ -0.57
CSTF1-206ENST00000493039 FBXO33Q7Z6M2 555 aa11.5□□□□□ -0.57
CSTF1-206ENST00000493039 STAP2Q9UGK3 403 aa11.5□□□□□ -0.57
CSTF1-206ENST00000493039 C6orf229H3BNL8 230 aa11.49□□□□□ -0.57
CSTF1-206ENST00000493039 IFIT2P09913 472 aaKnown RBP11.49□□□□□ -0.57
CSTF1-206ENST00000493039 IFIT1P09914 478 aaKnown RBP11.48□□□□□ -0.57
CSTF1-206ENST00000493039 SLC5A1P13866 664 aa11.48□□□□□ -0.57
CSTF1-206ENST00000493039 MX1P20591 662 aa11.48□□□□□ -0.57
CSTF1-206ENST00000493039 SCARF1Q14162 830 aa11.48□□□□□ -0.57
CSTF1-206ENST00000493039 CCDC102BQ68D86 513 aa11.48□□□□□ -0.57
CSTF1-206ENST00000493039 RTKN2Q8IZC4 609 aa11.48□□□□□ -0.57
CSTF1-206ENST00000493039 PI4K2BQ8TCG2 481 aa11.48□□□□□ -0.57
CSTF1-206ENST00000493039 PSMD1Q99460 953 aa11.48□□□□□ -0.57
CSTF1-206ENST00000493039 KCNJ4P48050 445 aa11.48□□□□□ -0.57
CSTF1-206ENST00000493039 OSBPL3Q9H4L5 887 aa11.48□□□□□ -0.57
CSTF1-206ENST00000493039 RIMBP2O15034 1052 aa11.47□□□□□ -0.57
CSTF1-206ENST00000493039 RGS3P49796 1198 aa11.47□□□□□ -0.57
CSTF1-206ENST00000493039 WASHC4Q2M389 1173 aa11.47□□□□□ -0.57
CSTF1-206ENST00000493039 ZNF277Q9NRM2 450 aaPredicted RBP11.47□□□□□ -0.57
CSTF1-206ENST00000493039 MED23Q9ULK4 1368 aa11.47□□□□□ -0.57
CSTF1-206ENST00000493039 FKBP4Q02790 459 aaKnown RBP eCLIP11.47□□□□□ -0.57
CSTF1-206ENST00000493039 GRIPAP1Q4V328 841 aa11.47□□□□□ -0.57
CSTF1-206ENST00000493039 SOGA3Q5TF21 947 aa11.47□□□□□ -0.57
CSTF1-206ENST00000493039 PI16Q6UXB8 463 aa11.47□□□□□ -0.57
CSTF1-206ENST00000493039 TMX4Q9H1E5 349 aaPredicted RBP11.47□□□□□ -0.57
CSTF1-206ENST00000493039 ECHDC1Q9NTX5 307 aa11.47□□□□□ -0.57
CSTF1-206ENST00000493039 ZBTB47Q9UFB7 747 aaPredicted RBP11.47□□□□□ -0.57
CSTF1-206ENST00000493039 NDUFB9Q9Y6M9 179 aa11.47□□□□□ -0.57
CSTF1-206ENST00000493039 COL4A5P29400 1685 aa11.46□□□□□ -0.57
CSTF1-206ENST00000493039 HIBADHP31937 336 aaKnown RBP11.46□□□□□ -0.57
CSTF1-206ENST00000493039 KIAA2012Q0VF49 1180 aa11.46□□□□□ -0.57
CSTF1-206ENST00000493039 KCNQ5Q9NR82 932 aa11.46□□□□□ -0.57
CSTF1-206ENST00000493039 IQSEC3Q9UPP2 1182 aaPredicted RBP11.46□□□□□ -0.57
CSTF1-206ENST00000493039 GSPT1P15170 499 aaKnown RBP11.45□□□□□ -0.58
CSTF1-206ENST00000493039 ATP5JP18859 108 aa11.45□□□□□ -0.58
CSTF1-206ENST00000493039 ARID4AP29374 1257 aaPredicted RBP11.45□□□□□ -0.58
CSTF1-206ENST00000493039 MCAMP43121 646 aa11.45□□□□□ -0.58
CSTF1-206ENST00000493039 RASSF7Q02833 373 aa11.45□□□□□ -0.58
CSTF1-206ENST00000493039 RASGRF1Q13972 1273 aa11.45□□□□□ -0.58
CSTF1-206ENST00000493039 AOC3Q16853 763 aa11.45□□□□□ -0.58
CSTF1-206ENST00000493039 ZNF512BQ96KM6 892 aaPredicted RBP11.45□□□□□ -0.58
CSTF1-206ENST00000493039 ZC3H12CQ9C0D7 883 aaKnown RBP11.45□□□□□ -0.58
CSTF1-206ENST00000493039 CD209Q9NNX6 404 aa11.45□□□□□ -0.58
CSTF1-206ENST00000493039 TTC41PQ6P2S7 1318 aa11.45□□□□□ -0.58
CSTF1-206ENST00000493039 DOK7Q18PE1 504 aa11.45□□□□□ -0.58
CSTF1-206ENST00000493039 TDRD7Q8NHU6 1098 aaKnown RBP11.45□□□□□ -0.58
CSTF1-206ENST00000493039 TAOK3Q9H2K8 898 aa11.45□□□□□ -0.58
CSTF1-206ENST00000493039 BOLA2Q9H3K6 86 aa11.45□□□□□ -0.58
CSTF1-206ENST00000493039 LTBP3Q9NS15 1303 aa11.45□□□□□ -0.58
CSTF1-206ENST00000493039 COL1A1P02452 1464 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms