RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 MASTLQ96GX5 879 aa17.1■□□□□ 0.33
PDZRN3-210ENST00000492909 ZNF512BQ96KM6 892 aaPredicted RBP17.1■□□□□ 0.33
PDZRN3-210ENST00000492909 DNAJC2Q99543 621 aaKnown RBP17.1■□□□□ 0.33
PDZRN3-210ENST00000492909 UPF2Q9HAU5 1272 aaKnown RBP17.1■□□□□ 0.33
PDZRN3-210ENST00000492909 AKAP11Q9UKA4 1901 aa17.09■□□□□ 0.33
PDZRN3-210ENST00000492909 DPEP1P16444 411 aa17.09■□□□□ 0.33
PDZRN3-210ENST00000492909 CHMLP26374 656 aa17.09■□□□□ 0.33
PDZRN3-210ENST00000492909 KCNJ4P48050 445 aa17.09■□□□□ 0.33
PDZRN3-210ENST00000492909 CCDC102BQ68D86 513 aa17.09■□□□□ 0.33
PDZRN3-210ENST00000492909 CACNA1SQ13698 1873 aa17.09■□□□□ 0.33
PDZRN3-210ENST00000492909 LRRC37AA6NMS7 1700 aa17.09■□□□□ 0.33
PDZRN3-210ENST00000492909 H0YIN7 160 aa17.08■□□□□ 0.33
PDZRN3-210ENST00000492909 MFAP1P55081 439 aaKnown RBP17.08■□□□□ 0.33
PDZRN3-210ENST00000492909 C2CD5Q86YS7 1000 aa17.08■□□□□ 0.33
PDZRN3-210ENST00000492909 ANKIB1Q9P2G1 1089 aa17.08■□□□□ 0.33
PDZRN3-210ENST00000492909 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.32
PDZRN3-210ENST00000492909 UQCRFS1P1P0C7P4 283 aa17.07■□□□□ 0.32
PDZRN3-210ENST00000492909 ARID4AP29374 1257 aaPredicted RBP17.07■□□□□ 0.32
PDZRN3-210ENST00000492909 PHKA1P46020 1223 aa17.07■□□□□ 0.32
PDZRN3-210ENST00000492909 FSD1Q9BTV5 496 aa17.07■□□□□ 0.32
PDZRN3-210ENST00000492909 PAG1Q9NWQ8 432 aa17.07■□□□□ 0.32
PDZRN3-210ENST00000492909 NDUFB9Q9Y6M9 179 aa17.07■□□□□ 0.32
PDZRN3-210ENST00000492909 XDHP47989 1333 aa17.07■□□□□ 0.32
PDZRN3-210ENST00000492909 KIAA1551Q9HCM1 1747 aa17.07■□□□□ 0.32
PDZRN3-210ENST00000492909 PPEF1O14829 653 aaPredicted RBP17.07■□□□□ 0.32
PDZRN3-210ENST00000492909 DEKP35659 375 aaKnown RBP17.07■□□□□ 0.32
PDZRN3-210ENST00000492909 EDC3Q96F86 508 aaKnown RBP17.07■□□□□ 0.32
PDZRN3-210ENST00000492909 LEMD3Q9Y2U8 911 aa17.07■□□□□ 0.32
PDZRN3-210ENST00000492909 ZNF804BA4D1E1 1349 aa17.07■□□□□ 0.32
PDZRN3-210ENST00000492909 HIP1O00291 1037 aa17.06■□□□□ 0.32
PDZRN3-210ENST00000492909 GOLIM4O00461 696 aa17.06■□□□□ 0.32
PDZRN3-210ENST00000492909 STYK1Q6J9G0 422 aa17.06■□□□□ 0.32
PDZRN3-210ENST00000492909 ZNF622Q969S3 477 aaKnown RBP eCLIP17.06■□□□□ 0.32
PDZRN3-210ENST00000492909 DIAPH3Q9NSV4 1193 aa17.06■□□□□ 0.32
PDZRN3-210ENST00000492909 KCNA3P22001 575 aa17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 MCAMP43121 646 aa17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 BCAMP50895 628 aa17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 TGFB2P61812 414 aa17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 FKBP4Q02790 459 aaKnown RBP eCLIP17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 SCARF1Q14162 830 aa17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 CAVIN4Q5BKX8 364 aa17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 SP8Q8IXZ3 490 aa17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 ATP6V0A2Q9Y487 856 aa17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 DLEC1Q9Y238 1755 aa17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 WTIPA6NIX2 430 aaPredicted RBP17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 KBTBD3Q8NAB2 608 aa17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 ESYT1Q9BSJ8 1104 aa17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 SNRKQ9NRH2 765 aa17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 NSFL1CQ9UNZ2 370 aaKnown RBP17.05■□□□□ 0.32
PDZRN3-210ENST00000492909 RFX7Q2KHR2 1363 aa17.04■□□□□ 0.32
PDZRN3-210ENST00000492909 MYH13Q9UKX3 1938 aa17.04■□□□□ 0.32
PDZRN3-210ENST00000492909 REC8O95072 547 aa17.04■□□□□ 0.32
PDZRN3-210ENST00000492909 GPSM2P81274 684 aa17.04■□□□□ 0.32
PDZRN3-210ENST00000492909 SLC51AQ86UW1 340 aa17.04■□□□□ 0.32
PDZRN3-210ENST00000492909 TICAM2Q86XR7 235 aa17.04■□□□□ 0.32
PDZRN3-210ENST00000492909 VPS37DQ86XT2 251 aa17.04■□□□□ 0.32
PDZRN3-210ENST00000492909 GNL3LQ9NVN8 582 aaKnown RBP17.04■□□□□ 0.32
PDZRN3-210ENST00000492909 MYH7P12883 1935 aa17.03■□□□□ 0.32
PDZRN3-210ENST00000492909 LTBP1Q14766 1721 aa17.03■□□□□ 0.32
PDZRN3-210ENST00000492909 ZAP70P43403 619 aa17.03■□□□□ 0.32
PDZRN3-210ENST00000492909 GYG1P46976 350 aa17.03■□□□□ 0.32
PDZRN3-210ENST00000492909 PI16Q6UXB8 463 aa17.03■□□□□ 0.32
PDZRN3-210ENST00000492909 RUFY2Q8WXA3 655 aa17.03■□□□□ 0.32
PDZRN3-210ENST00000492909 CNKSR1Q969H4 720 aa17.03■□□□□ 0.32
PDZRN3-210ENST00000492909 TMX4Q9H1E5 349 aaPredicted RBP17.03■□□□□ 0.32
PDZRN3-210ENST00000492909 PODXL2Q9NZ53 605 aa17.03■□□□□ 0.32
PDZRN3-210ENST00000492909 ATP2B4P23634 1241 aa17.02■□□□□ 0.32
PDZRN3-210ENST00000492909 RASGRF1Q13972 1273 aa17.02■□□□□ 0.32
PDZRN3-210ENST00000492909 CWC27Q6UX04 472 aaKnown RBP17.02■□□□□ 0.32
PDZRN3-210ENST00000492909 SPATA5Q8NB90 893 aa17.02■□□□□ 0.32
PDZRN3-210ENST00000492909 FAM84BQ96KN1 310 aaPredicted RBP17.02■□□□□ 0.32
PDZRN3-210ENST00000492909 GGA1Q9UJY5 639 aa17.02■□□□□ 0.32
PDZRN3-210ENST00000492909 SLX4Q8IY92 1834 aa17.02■□□□□ 0.32
PDZRN3-210ENST00000492909 UFL1O94874 794 aa17.02■□□□□ 0.31
PDZRN3-210ENST00000492909 KLRK1P26718 216 aa17.02■□□□□ 0.31
PDZRN3-210ENST00000492909 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.31
PDZRN3-210ENST00000492909 FBXO33Q7Z6M2 555 aa17.02■□□□□ 0.31
PDZRN3-210ENST00000492909 ANTXR1Q9H6X2 564 aa17.02■□□□□ 0.31
PDZRN3-210ENST00000492909 HMG20BQ9P0W2 317 aa17.02■□□□□ 0.31
PDZRN3-210ENST00000492909 MYO5AQ9Y4I1 1855 aaKnown RBP17.01■□□□□ 0.31
PDZRN3-210ENST00000492909 SGSM2O43147 1006 aa17.01■□□□□ 0.31
PDZRN3-210ENST00000492909 HIBADHP31937 336 aaKnown RBP17.01■□□□□ 0.31
PDZRN3-210ENST00000492909 LRRFIP1Q32MZ4 808 aaKnown RBP17.01■□□□□ 0.31
PDZRN3-210ENST00000492909 PRPF40BQ6NWY9 871 aaKnown RBP17.01■□□□□ 0.31
PDZRN3-210ENST00000492909 TBC1D32Q96NH3 1257 aa17.01■□□□□ 0.31
PDZRN3-210ENST00000492909 C22orf23Q9BZE7 217 aa17.01■□□□□ 0.31
PDZRN3-210ENST00000492909 IRS2Q9Y4H2 1338 aa17■□□□□ 0.31
PDZRN3-210ENST00000492909 C15orf52Q6ZUT6 534 aaKnown RBP17■□□□□ 0.31
PDZRN3-210ENST00000492909 DOCK2Q92608 1830 aa17■□□□□ 0.31
PDZRN3-210ENST00000492909 SEMA3EO15041 775 aa17■□□□□ 0.31
PDZRN3-210ENST00000492909 CYP2E1P05181 493 aaPredicted RBP17■□□□□ 0.31
PDZRN3-210ENST00000492909 YBX3P16989 372 aaKnown RBP eCLIP17■□□□□ 0.31
PDZRN3-210ENST00000492909 NMIQ13287 307 aaPredicted RBP17■□□□□ 0.31
PDZRN3-210ENST00000492909 TXNRD3Q86VQ6 643 aa17■□□□□ 0.31
PDZRN3-210ENST00000492909 TBC1D16Q8TBP0 767 aa17■□□□□ 0.31
PDZRN3-210ENST00000492909 PIM2Q9P1W9 311 aa17■□□□□ 0.31
PDZRN3-210ENST00000492909 RAD50Q92878 1312 aa16.99■□□□□ 0.31
PDZRN3-210ENST00000492909 BRCA1P38398 1863 aaKnown RBP16.99■□□□□ 0.31
PDZRN3-210ENST00000492909 MPNDQ8N594 471 aa16.99■□□□□ 0.31
PDZRN3-210ENST00000492909 FAM227BQ96M60 508 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms