RNA–Protein interactions for RNA: ENST00000491073.5

PDPK1-212, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best)

Gene PDPK1, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-212ENST00000491073 RNF20Q5VTR2 975 aa20.35■□□□□ 0.85
PDPK1-212ENST00000491073 BCL2L12Q9HB09 334 aa20.35■□□□□ 0.85
PDPK1-212ENST00000491073 DDX49Q9Y6V7 483 aaKnown RBP20.35■□□□□ 0.85
PDPK1-212ENST00000491073 U3KPZ7 1027 aaPredicted RBP20.35■□□□□ 0.85
PDPK1-212ENST00000491073 PUS7LQ9H0K6 701 aaKnown RBP20.34■□□□□ 0.85
PDPK1-212ENST00000491073 GDPD2Q9HCC8 539 aa20.34■□□□□ 0.85
PDPK1-212ENST00000491073 PIH1D3Q9NQM4 214 aaKnown RBP20.34■□□□□ 0.85
PDPK1-212ENST00000491073 HMG20BQ9P0W2 317 aa20.34■□□□□ 0.85
PDPK1-212ENST00000491073 KLHL40Q2TBA0 621 aa20.34■□□□□ 0.85
PDPK1-212ENST00000491073 PANK2Q9BZ23 570 aa20.34■□□□□ 0.85
PDPK1-212ENST00000491073 BCORQ6W2J9 1755 aa20.33■□□□□ 0.85
PDPK1-212ENST00000491073 PSMA5P28066 241 aa20.33■□□□□ 0.85
PDPK1-212ENST00000491073 GJB2P29033 226 aa20.33■□□□□ 0.85
PDPK1-212ENST00000491073 RBM27Q9P2N5 1060 aaKnown RBP20.33■□□□□ 0.85
PDPK1-212ENST00000491073 BTAF1O14981 1849 aa20.33■□□□□ 0.84
PDPK1-212ENST00000491073 THSD7AQ9UPZ6 1657 aa20.33■□□□□ 0.84
PDPK1-212ENST00000491073 SKOR2Q2VWA4 1001 aaPredicted RBP20.32■□□□□ 0.84
PDPK1-212ENST00000491073 L1TD1Q5T7N2 865 aaKnown RBP20.32■□□□□ 0.84
PDPK1-212ENST00000491073 NEK1Q96PY6 1258 aa20.32■□□□□ 0.84
PDPK1-212ENST00000491073 CCDC102BQ68D86 513 aa20.32■□□□□ 0.84
PDPK1-212ENST00000491073 ALDH8A1Q9H2A2 487 aaPredicted RBP20.32■□□□□ 0.84
PDPK1-212ENST00000491073 GOLGA6L22H0YM25 854 aa20.31■□□□□ 0.84
PDPK1-212ENST00000491073 ERFEQ4G0M1 354 aa20.31■□□□□ 0.84
PDPK1-212ENST00000491073 DSCC1Q9BVC3 393 aa20.31■□□□□ 0.84
PDPK1-212ENST00000491073 SRP68Q9UHB9 627 aaKnown RBP20.31■□□□□ 0.84
PDPK1-212ENST00000491073 SMC3Q9UQE7 1217 aa20.31■□□□□ 0.84
PDPK1-212ENST00000491073 STK3Q13188 491 aa20.31■□□□□ 0.84
PDPK1-212ENST00000491073 PARP10Q53GL7 1025 aa20.31■□□□□ 0.84
PDPK1-212ENST00000491073 ZSCAN31Q96LW9 406 aaPredicted RBP20.31■□□□□ 0.84
PDPK1-212ENST00000491073 ZNF831Q5JPB2 1677 aa20.31■□□□□ 0.84
PDPK1-212ENST00000491073 GOLGA6L3A6NEY3 463 aa20.3■□□□□ 0.84
PDPK1-212ENST00000491073 NKX2-3Q8TAU0 364 aa20.3■□□□□ 0.84
PDPK1-212ENST00000491073 SH2B1Q9NRF2 756 aaPredicted RBP20.3■□□□□ 0.84
PDPK1-212ENST00000491073 MYH7P12883 1935 aa20.3■□□□□ 0.84
PDPK1-212ENST00000491073 STX6O43752 255 aa20.3■□□□□ 0.84
PDPK1-212ENST00000491073 GADD45BO75293 160 aaPredicted RBP20.3■□□□□ 0.84
PDPK1-212ENST00000491073 BICDL1Q6ZP65 573 aa20.3■□□□□ 0.84
PDPK1-212ENST00000491073 Q6ZUG5 572 aa20.3■□□□□ 0.84
PDPK1-212ENST00000491073 AK7Q96M32 723 aa20.3■□□□□ 0.84
PDPK1-212ENST00000491073 RRAGDQ9NQL2 400 aaPredicted RBP20.3■□□□□ 0.84
PDPK1-212ENST00000491073 WASHC4Q2M389 1173 aa20.29■□□□□ 0.84
PDPK1-212ENST00000491073 TBC1D9BQ66K14 1250 aa20.29■□□□□ 0.84
PDPK1-212ENST00000491073 MTMR6Q9Y217 621 aa20.29■□□□□ 0.84
PDPK1-212ENST00000491073 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.29■□□□□ 0.84
PDPK1-212ENST00000491073 WDR33Q9C0J8 1336 aaKnown RBP20.29■□□□□ 0.84
PDPK1-212ENST00000491073 ZSCAN22P10073 491 aaPredicted RBP20.29■□□□□ 0.84
PDPK1-212ENST00000491073 CAVIN1Q6NZI2 390 aaKnown RBP20.29■□□□□ 0.84
PDPK1-212ENST00000491073 ZMYND15Q9H091 742 aa20.29■□□□□ 0.84
PDPK1-212ENST00000491073 CASZ1Q86V15 1759 aa20.28■□□□□ 0.84
PDPK1-212ENST00000491073 NCLP19338 710 aaKnown RBP20.28■□□□□ 0.84
PDPK1-212ENST00000491073 HSPA1LP34931 641 aa20.28■□□□□ 0.84
PDPK1-212ENST00000491073 CHST3Q7LGC8 479 aa20.28■□□□□ 0.84
PDPK1-212ENST00000491073 WWC3Q9ULE0 1092 aa20.28■□□□□ 0.84
PDPK1-212ENST00000491073 LAMB2P55268 1798 aa20.28■□□□□ 0.84
PDPK1-212ENST00000491073 E7EWF7 191 aa20.28■□□□□ 0.84
PDPK1-212ENST00000491073 ARID4AP29374 1257 aaPredicted RBP20.28■□□□□ 0.84
PDPK1-212ENST00000491073 PUM3Q15397 648 aaKnown RBP20.28■□□□□ 0.84
PDPK1-212ENST00000491073 CCDC24Q8N4L8 307 aa20.28■□□□□ 0.84
PDPK1-212ENST00000491073 ZNF512BQ96KM6 892 aaPredicted RBP20.28■□□□□ 0.84
PDPK1-212ENST00000491073 GPHNQ9NQX3 736 aaPredicted RBP20.28■□□□□ 0.84
PDPK1-212ENST00000491073 ARAP2Q8WZ64 1704 aa20.27■□□□□ 0.84
PDPK1-212ENST00000491073 HAND2P61296 217 aa20.27■□□□□ 0.84
PDPK1-212ENST00000491073 EXOSC10Q01780 885 aaKnown RBP20.27■□□□□ 0.84
PDPK1-212ENST00000491073 LPIN2Q92539 896 aa20.27■□□□□ 0.84
PDPK1-212ENST00000491073 MROH5Q6ZUA9 1318 aa20.27■□□□□ 0.84
PDPK1-212ENST00000491073 ABCC12Q96J65 1359 aa20.27■□□□□ 0.84
PDPK1-212ENST00000491073 RRP9O43818 475 aaKnown RBP20.27■□□□□ 0.83
PDPK1-212ENST00000491073 JAK2O60674 1132 aa20.27■□□□□ 0.83
PDPK1-212ENST00000491073 PTMSP20962 102 aa20.27■□□□□ 0.83
PDPK1-212ENST00000491073 KRT32Q14532 448 aa20.27■□□□□ 0.83
PDPK1-212ENST00000491073 TMEM63CQ9P1W3 806 aa20.27■□□□□ 0.83
PDPK1-212ENST00000491073 CNPY2Q9Y2B0 182 aa20.27■□□□□ 0.83
PDPK1-212ENST00000491073 CNTNAP4Q9C0A0 1308 aa20.27■□□□□ 0.83
PDPK1-212ENST00000491073 FGAP02671 866 aa20.26■□□□□ 0.83
PDPK1-212ENST00000491073 ADD2P35612 726 aa20.26■□□□□ 0.83
PDPK1-212ENST00000491073 BCAMP50895 628 aa20.26■□□□□ 0.83
PDPK1-212ENST00000491073 RASGRF1Q13972 1273 aa20.26■□□□□ 0.83
PDPK1-212ENST00000491073 TICAM2Q86XR7 235 aa20.26■□□□□ 0.83
PDPK1-212ENST00000491073 APPBP2Q92624 585 aa20.26■□□□□ 0.83
PDPK1-212ENST00000491073 BRF1Q92994 677 aa20.26■□□□□ 0.83
PDPK1-212ENST00000491073 DENND2AQ9ULE3 1009 aa20.26■□□□□ 0.83
PDPK1-212ENST00000491073 SPATA31A6Q5VVP1 1343 aa20.26■□□□□ 0.83
PDPK1-212ENST00000491073 CCDC152Q4G0S7 254 aa20.26■□□□□ 0.83
PDPK1-212ENST00000491073 USP48Q86UV5 1035 aa20.26■□□□□ 0.83
PDPK1-212ENST00000491073 TCRBV5S4A2TA0A5A2 114 aa20.25■□□□□ 0.83
PDPK1-212ENST00000491073 GPAA1O43292 621 aa20.25■□□□□ 0.83
PDPK1-212ENST00000491073 F13A1P00488 732 aa20.25■□□□□ 0.83
PDPK1-212ENST00000491073 SLC9C2Q5TAH2 1124 aa20.25■□□□□ 0.83
PDPK1-212ENST00000491073 CLEC4GQ6UXB4 293 aa20.25■□□□□ 0.83
PDPK1-212ENST00000491073 SLC51AQ86UW1 340 aa20.25■□□□□ 0.83
PDPK1-212ENST00000491073 GJD4Q96KN9 370 aaPredicted RBP20.25■□□□□ 0.83
PDPK1-212ENST00000491073 MPHOSPH8Q99549 860 aa20.25■□□□□ 0.83
PDPK1-212ENST00000491073 NBPF3Q9H094 633 aa20.25■□□□□ 0.83
PDPK1-212ENST00000491073 NHSQ6T4R5 1651 aa20.25■□□□□ 0.83
PDPK1-212ENST00000491073 RTL9Q8NET4 1388 aa20.25■□□□□ 0.83
PDPK1-212ENST00000491073 ZSCAN23Q3MJ62 389 aa20.24■□□□□ 0.83
PDPK1-212ENST00000491073 IDH1O75874 414 aaKnown RBP20.24■□□□□ 0.83
PDPK1-212ENST00000491073 CHRNDQ07001 517 aa20.24■□□□□ 0.83
PDPK1-212ENST00000491073 AFF2P51816 1311 aa20.23■□□□□ 0.83
PDPK1-212ENST00000491073 DHX32Q7L7V1 743 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms