RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 FAM161BQ96MY7 647 aa6.63□□□□□ -1.35
CD46-216ENST00000490278 PBX4Q9BYU1 374 aa6.63□□□□□ -1.35
CD46-216ENST00000490278 BCO2Q9BYV7 579 aa6.63□□□□□ -1.35
CD46-216ENST00000490278 RASSF4Q9H2L5 321 aa6.63□□□□□ -1.35
CD46-216ENST00000490278 FRRS1LQ9P0K9 344 aa6.63□□□□□ -1.35
CD46-216ENST00000490278 AK5Q9Y6K8 562 aa6.63□□□□□ -1.35
CD46-216ENST00000490278 NFKBIEO00221 500 aa6.62□□□□□ -1.35
CD46-216ENST00000490278 OIP5O43482 229 aa6.62□□□□□ -1.35
CD46-216ENST00000490278 SMNDC1O75940 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
CD46-216ENST00000490278 ATP11AP98196 1134 aa6.62□□□□□ -1.35
CD46-216ENST00000490278 PSAPL1Q6NUJ1 521 aa6.62□□□□□ -1.35
CD46-216ENST00000490278 PLD4Q96BZ4 506 aa6.62□□□□□ -1.35
CD46-216ENST00000490278 LPIN3Q9BQK8 851 aa6.62□□□□□ -1.35
CD46-216ENST00000490278 OSBPL7Q9BZF2 842 aa6.62□□□□□ -1.35
CD46-216ENST00000490278 SRCIN1Q9C0H9 1055 aa6.62□□□□□ -1.35
CD46-216ENST00000490278 C12orf49Q9H741 205 aa6.62□□□□□ -1.35
CD46-216ENST00000490278 LIN7BQ9HAP6 207 aa6.62□□□□□ -1.35
CD46-216ENST00000490278 PPP4R2Q9NY27 417 aa6.62□□□□□ -1.35
CD46-216ENST00000490278 TRAK1Q9UPV9 953 aa6.62□□□□□ -1.35
CD46-216ENST00000490278 E9PSI1 815 aa6.61□□□□□ -1.35
CD46-216ENST00000490278 PDE2AO00408 941 aaPredicted RBP6.61□□□□□ -1.35
CD46-216ENST00000490278 TRPA1O75762 1119 aa6.61□□□□□ -1.35
CD46-216ENST00000490278 CELA2BP08218 269 aaPredicted RBP6.61□□□□□ -1.35
CD46-216ENST00000490278 EIF4BP23588 611 aaKnown RBP6.61□□□□□ -1.35
CD46-216ENST00000490278 MRPL58Q14197 206 aaKnown RBP6.61□□□□□ -1.35
CD46-216ENST00000490278 CEP135Q66GS9 1140 aa6.61□□□□□ -1.35
CD46-216ENST00000490278 KANK3Q6NY19 840 aa6.61□□□□□ -1.35
CD46-216ENST00000490278 NXPE4Q6UWF7 544 aa6.61□□□□□ -1.35
CD46-216ENST00000490278 LYPD4Q6UWN0 246 aa6.61□□□□□ -1.35
CD46-216ENST00000490278 CCNJLQ8IV13 435 aa6.61□□□□□ -1.35
CD46-216ENST00000490278 TMEM102Q8N9M5 508 aaPredicted RBP6.61□□□□□ -1.35
CD46-216ENST00000490278 TCF12Q99081 682 aa6.61□□□□□ -1.35
CD46-216ENST00000490278 SMG9Q9H0W8 520 aaKnown RBP6.61□□□□□ -1.35
CD46-216ENST00000490278 KIAA1522Q9P206 1035 aaPredicted RBP6.61□□□□□ -1.35
CD46-216ENST00000490278 RGS9O75916 674 aaPredicted RBP6.6□□□□□ -1.35
CD46-216ENST00000490278 VAMP1P23763 118 aa6.6□□□□□ -1.35
CD46-216ENST00000490278 PRPF40BQ6NWY9 871 aaKnown RBP6.6□□□□□ -1.35
CD46-216ENST00000490278 CHSY3Q70JA7 882 aa6.6□□□□□ -1.35
CD46-216ENST00000490278 GLIS3Q8NEA6 775 aa6.6□□□□□ -1.35
CD46-216ENST00000490278 TTC9Q92623 222 aa6.6□□□□□ -1.35
CD46-216ENST00000490278 NXPE3Q969Y0 559 aa6.6□□□□□ -1.35
CD46-216ENST00000490278 BTBD6Q96KE9 485 aa6.6□□□□□ -1.35
CD46-216ENST00000490278 HHIPQ96QV1 700 aa6.6□□□□□ -1.35
CD46-216ENST00000490278 BHLHE41Q9C0J9 482 aaPredicted RBP6.6□□□□□ -1.35
CD46-216ENST00000490278 FAM8A1Q9UBU6 413 aa6.6□□□□□ -1.35
CD46-216ENST00000490278 VTI1BQ9UEU0 232 aa6.6□□□□□ -1.35
CD46-216ENST00000490278 STARD13Q9Y3M8 1113 aa6.6□□□□□ -1.35
CD46-216ENST00000490278 SHISA8B8ZZ34 492 aa6.59□□□□□ -1.35
CD46-216ENST00000490278 ALBP02768 609 aa6.59□□□□□ -1.35
CD46-216ENST00000490278 AMPD1P23109 780 aa6.59□□□□□ -1.35
CD46-216ENST00000490278 MAP3K10Q02779 954 aa6.59□□□□□ -1.35
CD46-216ENST00000490278 C20orf204Q6ZNR8 217 aa6.59□□□□□ -1.35
CD46-216ENST00000490278 WHAMMQ8TF30 809 aa6.59□□□□□ -1.35
CD46-216ENST00000490278 NUDT8Q8WV74 236 aa6.59□□□□□ -1.35
CD46-216ENST00000490278 POP1Q99575 1024 aaKnown RBP6.59□□□□□ -1.35
CD46-216ENST00000490278 JPH1Q9HDC5 661 aaPredicted RBP6.59□□□□□ -1.35
CD46-216ENST00000490278 TMEM238LA0A1B0GVL6 79 aa6.58□□□□□ -1.36
CD46-216ENST00000490278 M0R082 166 aa6.58□□□□□ -1.36
CD46-216ENST00000490278 USP17L7P0C7H9 530 aa6.58□□□□□ -1.36
CD46-216ENST00000490278 PTPRAP18433 802 aa6.58□□□□□ -1.36
CD46-216ENST00000490278 GSTT1P30711 240 aa6.58□□□□□ -1.36
CD46-216ENST00000490278 GRIA4P48058 902 aa6.58□□□□□ -1.36
CD46-216ENST00000490278 ZNF385CQ66K41 422 aaPredicted RBP6.58□□□□□ -1.36
CD46-216ENST00000490278 ZNF417Q8TAU3 575 aa6.58□□□□□ -1.36
CD46-216ENST00000490278 ASAP3Q8TDY4 903 aa6.58□□□□□ -1.36
CD46-216ENST00000490278 ZNF587Q96SQ5 575 aaPredicted RBP6.58□□□□□ -1.36
CD46-216ENST00000490278 ABCB6Q9NP58 842 aa6.58□□□□□ -1.36
CD46-216ENST00000490278 A0A096LPE4 126 aa6.57□□□□□ -1.36
CD46-216ENST00000490278 A0A1W2PPZ6 126 aa6.57□□□□□ -1.36
CD46-216ENST00000490278 METTL12A8MUP2 240 aa6.57□□□□□ -1.36
CD46-216ENST00000490278 LILRB5O75023 590 aa6.57□□□□□ -1.36
CD46-216ENST00000490278 XRCC5P13010 732 aaKnown RBP6.57□□□□□ -1.36
CD46-216ENST00000490278 FCGRTP55899 365 aa6.57□□□□□ -1.36
CD46-216ENST00000490278 GDF6Q6KF10 455 aaPredicted RBP6.57□□□□□ -1.36
CD46-216ENST00000490278 DTHD1Q6ZMT9 781 aa6.57□□□□□ -1.36
CD46-216ENST00000490278 CACTIN-AS1Q8N1I8 211 aa6.57□□□□□ -1.36
CD46-216ENST00000490278 SVOPQ8N4V2 548 aa6.57□□□□□ -1.36
CD46-216ENST00000490278 CRELD1Q96HD1 420 aa6.57□□□□□ -1.36
CD46-216ENST00000490278 BACH2Q9BYV9 841 aa6.57□□□□□ -1.36
CD46-216ENST00000490278 ENAMQ9NRM1 1142 aa6.57□□□□□ -1.36
CD46-216ENST00000490278 ADAMTS8Q9UP79 889 aa6.57□□□□□ -1.36
CD46-216ENST00000490278 TRIM33Q9UPN9 1127 aa6.57□□□□□ -1.36
CD46-216ENST00000490278 FAM177BA6PVY3 158 aa6.56□□□□□ -1.36
CD46-216ENST00000490278 RNF225M0QZC1 329 aaPredicted RBP6.56□□□□□ -1.36
CD46-216ENST00000490278 RECKO95980 971 aa6.56□□□□□ -1.36
CD46-216ENST00000490278 CTSHP09668 335 aa6.56□□□□□ -1.36
CD46-216ENST00000490278 ITPKAP23677 461 aa6.56□□□□□ -1.36
CD46-216ENST00000490278 AFF1P51825 1210 aaKnown RBP6.56□□□□□ -1.36
CD46-216ENST00000490278 PTPN12Q05209 780 aaKnown RBP6.56□□□□□ -1.36
CD46-216ENST00000490278 GRIK5Q16478 980 aa6.56□□□□□ -1.36
CD46-216ENST00000490278 SPRED3Q2MJR0 410 aa6.56□□□□□ -1.36
CD46-216ENST00000490278 TSNAXIP1Q2TAA8 658 aa6.56□□□□□ -1.36
CD46-216ENST00000490278 NEDD1Q8NHV4 660 aa6.56□□□□□ -1.36
CD46-216ENST00000490278 BSNDQ8WZ55 320 aa6.56□□□□□ -1.36
CD46-216ENST00000490278 LACRTQ9GZZ8 138 aa6.56□□□□□ -1.36
CD46-216ENST00000490278 ADAM19Q9H013 955 aa6.56□□□□□ -1.36
CD46-216ENST00000490278 ZFYVE1Q9HBF4 777 aa6.56□□□□□ -1.36
CD46-216ENST00000490278 PRDM6Q9NQX0 595 aa6.56□□□□□ -1.36
CD46-216ENST00000490278 CDC27P30260 824 aa6.55□□□□□ -1.36
CD46-216ENST00000490278 ADAMTSL4Q6UY14 1074 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms