RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 MRS2Q9HD23 443 aa20.04■□□□□ 0.8
NUP58-213ENST00000490231 LEMD3Q9Y2U8 911 aa20.04■□□□□ 0.8
NUP58-213ENST00000490231 ZNF157P51786 506 aaPredicted RBP20.03■□□□□ 0.8
NUP58-213ENST00000490231 CASP7P55210 303 aa20.03■□□□□ 0.8
NUP58-213ENST00000490231 FKBP5Q13451 457 aaPredicted RBP20.03■□□□□ 0.8
NUP58-213ENST00000490231 WDR63Q8IWG1 891 aa20.03■□□□□ 0.8
NUP58-213ENST00000490231 LINS1Q8NG48 757 aa20.03■□□□□ 0.8
NUP58-213ENST00000490231 DNAAF4Q8WXU2 420 aa20.03■□□□□ 0.8
NUP58-213ENST00000490231 COA1Q9GZY4 146 aa20.03■□□□□ 0.8
NUP58-213ENST00000490231 PSME4Q14997 1843 aa20.03■□□□□ 0.8
NUP58-213ENST00000490231 CSF1RP07333 972 aa20.02■□□□□ 0.8
NUP58-213ENST00000490231 ITGA6P23229 1130 aa20.02■□□□□ 0.8
NUP58-213ENST00000490231 DACT2Q5SW24 774 aa20.02■□□□□ 0.8
NUP58-213ENST00000490231 MYO3BQ8WXR4 1341 aa20.02■□□□□ 0.79
NUP58-213ENST00000490231 VAMP4O75379 141 aa20.01■□□□□ 0.79
NUP58-213ENST00000490231 SLC10A3P09131 477 aa20.01■□□□□ 0.79
NUP58-213ENST00000490231 FKBP1BP68106 108 aa20.01■□□□□ 0.79
NUP58-213ENST00000490231 STRIP1Q5VSL9 837 aa20.01■□□□□ 0.79
NUP58-213ENST00000490231 ANKRD2Q9GZV1 360 aa20.01■□□□□ 0.79
NUP58-213ENST00000490231 SAGE1Q9NXZ1 904 aa20.01■□□□□ 0.79
NUP58-213ENST00000490231 MMP14P50281 582 aa20■□□□□ 0.79
NUP58-213ENST00000490231 KIF23Q02241 960 aaPredicted RBP20■□□□□ 0.79
NUP58-213ENST00000490231 FAM161AQ3B820 660 aa20■□□□□ 0.79
NUP58-213ENST00000490231 MPHOSPH8Q99549 860 aa20■□□□□ 0.79
NUP58-213ENST00000490231 MYH3P11055 1940 aa20■□□□□ 0.79
NUP58-213ENST00000490231 ZNF804BA4D1E1 1349 aa20■□□□□ 0.79
NUP58-213ENST00000490231 ANP32CO43423 234 aa19.99■□□□□ 0.79
NUP58-213ENST00000490231 TXNRD3Q86VQ6 643 aa19.99■□□□□ 0.79
NUP58-213ENST00000490231 OGFOD1Q8N543 542 aa19.99■□□□□ 0.79
NUP58-213ENST00000490231 EXOSC9Q06265 439 aaKnown RBP19.98■□□□□ 0.79
NUP58-213ENST00000490231 MCOLN1Q9GZU1 580 aa19.98■□□□□ 0.79
NUP58-213ENST00000490231 CCDC85CA6NKD9 419 aa19.97■□□□□ 0.79
NUP58-213ENST00000490231 NBPF9Q3BBW0 867 aa19.97■□□□□ 0.79
NUP58-213ENST00000490231 REM2Q8IYK8 340 aaPredicted RBP19.97■□□□□ 0.79
NUP58-213ENST00000490231 MXD3Q9BW11 206 aa19.97■□□□□ 0.79
NUP58-213ENST00000490231 POLR2AP24928 1970 aaKnown RBP19.96■□□□□ 0.79
NUP58-213ENST00000490231 ANKRD18BA2A2Z9 1011 aa19.96■□□□□ 0.79
NUP58-213ENST00000490231 WNT10BO00744 389 aa19.96■□□□□ 0.79
NUP58-213ENST00000490231 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
NUP58-213ENST00000490231 CHRNDQ07001 517 aa19.96■□□□□ 0.79
NUP58-213ENST00000490231 RASAL3Q86YV0 1011 aa19.96■□□□□ 0.79
NUP58-213ENST00000490231 FBXW7Q969H0 707 aa19.96■□□□□ 0.79
NUP58-213ENST00000490231 RNF186Q9NXI6 227 aa19.96■□□□□ 0.79
NUP58-213ENST00000490231 SALL2Q9Y467 1007 aaPredicted RBP19.96■□□□□ 0.79
NUP58-213ENST00000490231 SPEF2Q9C093 1822 aa19.96■□□□□ 0.79
NUP58-213ENST00000490231 PAPPA2Q9BXP8 1791 aa19.95■□□□□ 0.78
NUP58-213ENST00000490231 KLRK1P26718 216 aa19.95■□□□□ 0.78
NUP58-213ENST00000490231 TTLL5Q6EMB2 1281 aa19.95■□□□□ 0.78
NUP58-213ENST00000490231 CSRNP1Q96S65 589 aa19.95■□□□□ 0.78
NUP58-213ENST00000490231 ZNF646O15015 1829 aaPredicted RBP19.95■□□□□ 0.78
NUP58-213ENST00000490231 KCNJ4P48050 445 aa19.94■□□□□ 0.78
NUP58-213ENST00000490231 FOXO4P98177 505 aa19.94■□□□□ 0.78
NUP58-213ENST00000490231 DGKZQ13574 1117 aa19.94■□□□□ 0.78
NUP58-213ENST00000490231 BEND3Q5T5X7 828 aa19.94■□□□□ 0.78
NUP58-213ENST00000490231 TRPA1O75762 1119 aa19.93■□□□□ 0.78
NUP58-213ENST00000490231 RGS19P49795 217 aa19.93■□□□□ 0.78
NUP58-213ENST00000490231 IFIT5Q13325 482 aaKnown RBP19.93■□□□□ 0.78
NUP58-213ENST00000490231 C15orf52Q6ZUT6 534 aaKnown RBP19.93■□□□□ 0.78
NUP58-213ENST00000490231 SPINK5Q9NQ38 1064 aaPredicted RBP19.93■□□□□ 0.78
NUP58-213ENST00000490231 HDAC9Q9UKV0 1011 aa19.93■□□□□ 0.78
NUP58-213ENST00000490231 SCAF8Q9UPN6 1271 aaKnown RBP19.93■□□□□ 0.78
NUP58-213ENST00000490231 ZNF316A6NFI3 1004 aaPredicted RBP19.92■□□□□ 0.78
NUP58-213ENST00000490231 F6X3S4 739 aa19.92■□□□□ 0.78
NUP58-213ENST00000490231 GTF2IP78347 998 aa19.92■□□□□ 0.78
NUP58-213ENST00000490231 CD209Q9NNX6 404 aa19.92■□□□□ 0.78
NUP58-213ENST00000490231 IRS2Q9Y4H2 1338 aa19.92■□□□□ 0.78
NUP58-213ENST00000490231 SASH1O94885 1247 aa19.91■□□□□ 0.78
NUP58-213ENST00000490231 PRAMEF18Q5VWM3 479 aa19.91■□□□□ 0.78
NUP58-213ENST00000490231 MOB2Q70IA6 237 aa19.91■□□□□ 0.78
NUP58-213ENST00000490231 KIAA0825Q8IV33 1275 aa19.91■□□□□ 0.78
NUP58-213ENST00000490231 ZBED3Q96IU2 234 aaPredicted RBP19.91■□□□□ 0.78
NUP58-213ENST00000490231 CACNA1FO60840 1977 aa19.9■□□□□ 0.78
NUP58-213ENST00000490231 UBE2Q2LH0YL09 131 aa19.9■□□□□ 0.78
NUP58-213ENST00000490231 NF2P35240 595 aa19.9■□□□□ 0.78
NUP58-213ENST00000490231 APOBEC3FQ8IUX4 373 aaKnown RBP19.9■□□□□ 0.78
NUP58-213ENST00000490231 GRM8O00222 908 aa19.89■□□□□ 0.77
NUP58-213ENST00000490231 TAF5LO75529 589 aa19.89■□□□□ 0.77
NUP58-213ENST00000490231 LMBR1LQ6UX01 489 aa19.89■□□□□ 0.77
NUP58-213ENST00000490231 CHMP3Q9Y3E7 222 aa19.89■□□□□ 0.77
NUP58-213ENST00000490231 CASP8AP2Q9UKL3 1982 aa19.88■□□□□ 0.77
NUP58-213ENST00000490231 SNAP23O00161 211 aa19.88■□□□□ 0.77
NUP58-213ENST00000490231 IL1R1P14778 569 aa19.88■□□□□ 0.77
NUP58-213ENST00000490231 MLLT1Q03111 559 aaPredicted RBP19.88■□□□□ 0.77
NUP58-213ENST00000490231 TTLL12Q14166 644 aaPredicted RBP19.88■□□□□ 0.77
NUP58-213ENST00000490231 CCDC57Q2TAC2 916 aa19.88■□□□□ 0.77
NUP58-213ENST00000490231 HELBQ8NG08 1087 aaPredicted RBP19.88■□□□□ 0.77
NUP58-213ENST00000490231 ALDH1L1O75891 902 aa19.87■□□□□ 0.77
NUP58-213ENST00000490231 EPHA10Q5JZY3 1008 aa19.87■□□□□ 0.77
NUP58-213ENST00000490231 ZNF804AQ7Z570 1209 aa19.87■□□□□ 0.77
NUP58-213ENST00000490231 MTMR14Q8NCE2 650 aa19.87■□□□□ 0.77
NUP58-213ENST00000490231 COL1A1P02452 1464 aaPredicted RBP19.86■□□□□ 0.77
NUP58-213ENST00000490231 FKBP1AP62942 108 aaKnown RBP19.86■□□□□ 0.77
NUP58-213ENST00000490231 DLGAP5Q15398 846 aa19.86■□□□□ 0.77
NUP58-213ENST00000490231 LDHAL6AQ6ZMR3 332 aa19.86■□□□□ 0.77
NUP58-213ENST00000490231 ARMC9Q7Z3E5 817 aa19.86■□□□□ 0.77
NUP58-213ENST00000490231 FAM9BQ8IZU0 186 aa19.86■□□□□ 0.77
NUP58-213ENST00000490231 CERS5Q8N5B7 392 aa19.86■□□□□ 0.77
NUP58-213ENST00000490231 C9orf78Q9NZ63 289 aaPredicted RBP19.86■□□□□ 0.77
NUP58-213ENST00000490231 TM4SF4P48230 202 aa19.85■□□□□ 0.77
NUP58-213ENST00000490231 TAF7LQ5H9L4 462 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms